Protein–RNA interactions for Protein: P61024

CKS1B, Cyclin-dependent kinases regulatory subunit 1, humanhuman

Predictions only

Length 79 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP61024 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC17.61■□□□□ 0.41
CKS1BP61024 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
CKS1BP61024 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CKS1BP61024 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
CKS1BP61024 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CKS1BP61024 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CKS1BP61024 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC17.6■□□□□ 0.41
CKS1BP61024 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
CKS1BP61024 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
CKS1BP61024 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CKS1BP61024 RARA-203ENST00000394086 2008 ntTSL 2 BASIC17.59■□□□□ 0.41
CKS1BP61024 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
CKS1BP61024 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CKS1BP61024 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
CKS1BP61024 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
CKS1BP61024 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CKS1BP61024 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
CKS1BP61024 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CKS1BP61024 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CKS1BP61024 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CKS1BP61024 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CKS1BP61024 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CKS1BP61024 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CKS1BP61024 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC17.56■□□□□ 0.4
CKS1BP61024 AP002365.1-201ENST00000603448 772 ntBASIC17.56■□□□□ 0.4
CKS1BP61024 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC17.56■□□□□ 0.4
CKS1BP61024 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
CKS1BP61024 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CKS1BP61024 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC17.56■□□□□ 0.4
CKS1BP61024 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
CKS1BP61024 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC17.55■□□□□ 0.4
CKS1BP61024 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
CKS1BP61024 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
CKS1BP61024 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CKS1BP61024 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CKS1BP61024 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CKS1BP61024 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
CKS1BP61024 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CKS1BP61024 AC142086.6-201ENST00000621154 1765 ntBASIC17.53■□□□□ 0.4
CKS1BP61024 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
CKS1BP61024 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC17.53■□□□□ 0.4
CKS1BP61024 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CKS1BP61024 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
CKS1BP61024 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
CKS1BP61024 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC17.53■□□□□ 0.4
CKS1BP61024 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC17.52■□□□□ 0.4
CKS1BP61024 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC17.52■□□□□ 0.4
CKS1BP61024 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
CKS1BP61024 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC17.52■□□□□ 0.4
CKS1BP61024 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC17.52■□□□□ 0.4
CKS1BP61024 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
CKS1BP61024 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CKS1BP61024 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
CKS1BP61024 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.39
CKS1BP61024 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC17.51■□□□□ 0.39
CKS1BP61024 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
CKS1BP61024 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC17.51■□□□□ 0.39
CKS1BP61024 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC17.51■□□□□ 0.39
CKS1BP61024 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
CKS1BP61024 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC17.5■□□□□ 0.39
CKS1BP61024 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CKS1BP61024 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CKS1BP61024 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC17.5■□□□□ 0.39
CKS1BP61024 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC17.5■□□□□ 0.39
CKS1BP61024 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC17.5■□□□□ 0.39
CKS1BP61024 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC17.49■□□□□ 0.39
CKS1BP61024 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CKS1BP61024 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CKS1BP61024 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
CKS1BP61024 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CKS1BP61024 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CKS1BP61024 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CKS1BP61024 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CKS1BP61024 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CKS1BP61024 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CKS1BP61024 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CKS1BP61024 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
CKS1BP61024 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
CKS1BP61024 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CKS1BP61024 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC17.47■□□□□ 0.39
CKS1BP61024 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CKS1BP61024 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CKS1BP61024 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC17.47■□□□□ 0.39
CKS1BP61024 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CKS1BP61024 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CKS1BP61024 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC17.45■□□□□ 0.38
CKS1BP61024 WASH5P-204ENST00000632292 975 ntBASIC17.45■□□□□ 0.38
CKS1BP61024 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
CKS1BP61024 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CKS1BP61024 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CKS1BP61024 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CKS1BP61024 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CKS1BP61024 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CKS1BP61024 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
CKS1BP61024 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
CKS1BP61024 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CKS1BP61024 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CKS1BP61024 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
CKS1BP61024 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
CKS1BP61024 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 18.8 ms