Protein–RNA interactions for Protein: P48066

SLC6A11, Sodium- and chloride-dependent GABA transporter 3, humanhuman

Predictions only

Length 632 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A11P48066 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
SLC6A11P48066 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
SLC6A11P48066 TPT1-202ENST00000379055 948 ntTSL 2 BASIC26.4■■□□□ 1.82
SLC6A11P48066 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC26.4■■□□□ 1.82
SLC6A11P48066 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC26.4■■□□□ 1.82
SLC6A11P48066 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC26.4■■□□□ 1.82
SLC6A11P48066 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC26.39■■□□□ 1.82
SLC6A11P48066 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
SLC6A11P48066 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC26.39■■□□□ 1.82
SLC6A11P48066 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
SLC6A11P48066 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC26.39■■□□□ 1.82
SLC6A11P48066 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC26.39■■□□□ 1.82
SLC6A11P48066 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC26.38■■□□□ 1.81
SLC6A11P48066 GPX1-201ENST00000419349 1106 ntBASIC26.38■■□□□ 1.81
SLC6A11P48066 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC26.37■■□□□ 1.81
SLC6A11P48066 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC26.37■■□□□ 1.81
SLC6A11P48066 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC26.37■■□□□ 1.81
SLC6A11P48066 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
SLC6A11P48066 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
SLC6A11P48066 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
SLC6A11P48066 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC26.34■■□□□ 1.81
SLC6A11P48066 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC26.33■■□□□ 1.81
SLC6A11P48066 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC26.33■■□□□ 1.81
SLC6A11P48066 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC26.33■■□□□ 1.81
SLC6A11P48066 CEP120-209ENST00000515110 606 ntTSL 3 BASIC26.32■■□□□ 1.8
SLC6A11P48066 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC26.32■■□□□ 1.8
SLC6A11P48066 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC26.32■■□□□ 1.8
SLC6A11P48066 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
SLC6A11P48066 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC26.31■■□□□ 1.8
SLC6A11P48066 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
SLC6A11P48066 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC26.31■■□□□ 1.8
SLC6A11P48066 AC110285.7-201ENST00000624417 1536 ntBASIC26.31■■□□□ 1.8
SLC6A11P48066 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC26.31■■□□□ 1.8
SLC6A11P48066 RARRES2P2-201ENST00000394842 485 ntBASIC26.31■■□□□ 1.8
SLC6A11P48066 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC26.31■■□□□ 1.8
SLC6A11P48066 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC26.3■■□□□ 1.8
SLC6A11P48066 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC26.3■■□□□ 1.8
SLC6A11P48066 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC26.3■■□□□ 1.8
SLC6A11P48066 AC008813.1-201ENST00000536597 885 ntBASIC26.3■■□□□ 1.8
SLC6A11P48066 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
SLC6A11P48066 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
SLC6A11P48066 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC26.29■■□□□ 1.8
SLC6A11P48066 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC26.29■■□□□ 1.8
SLC6A11P48066 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
SLC6A11P48066 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC26.28■■□□□ 1.8
SLC6A11P48066 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC26.28■■□□□ 1.8
SLC6A11P48066 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
SLC6A11P48066 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
SLC6A11P48066 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
SLC6A11P48066 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC26.26■■□□□ 1.79
SLC6A11P48066 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
SLC6A11P48066 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC26.26■■□□□ 1.79
SLC6A11P48066 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC26.26■■□□□ 1.79
SLC6A11P48066 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
SLC6A11P48066 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
SLC6A11P48066 AC022413.1-201ENST00000624602 984 ntBASIC26.25■■□□□ 1.79
SLC6A11P48066 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
SLC6A11P48066 RNF126P1-201ENST00000567452 1320 ntBASIC26.24■■□□□ 1.79
SLC6A11P48066 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC26.24■■□□□ 1.79
SLC6A11P48066 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
SLC6A11P48066 CHST11-203ENST00000547956 936 ntTSL 2 BASIC26.23■■□□□ 1.79
SLC6A11P48066 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC26.23■■□□□ 1.79
SLC6A11P48066 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
SLC6A11P48066 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC26.22■■□□□ 1.79
SLC6A11P48066 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC26.22■■□□□ 1.79
SLC6A11P48066 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
SLC6A11P48066 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
SLC6A11P48066 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC26.22■■□□□ 1.79
SLC6A11P48066 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
SLC6A11P48066 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC26.21■■□□□ 1.79
SLC6A11P48066 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
SLC6A11P48066 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
SLC6A11P48066 ST7-AS1-201ENST00000456775 1889 ntBASIC26.21■■□□□ 1.79
SLC6A11P48066 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.79
SLC6A11P48066 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC26.2■■□□□ 1.79
SLC6A11P48066 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
SLC6A11P48066 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC26.2■■□□□ 1.78
SLC6A11P48066 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC26.2■■□□□ 1.78
SLC6A11P48066 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
SLC6A11P48066 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC26.2■■□□□ 1.78
SLC6A11P48066 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
SLC6A11P48066 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC26.19■■□□□ 1.78
SLC6A11P48066 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC26.18■■□□□ 1.78
SLC6A11P48066 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
SLC6A11P48066 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC26.18■■□□□ 1.78
SLC6A11P48066 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC26.18■■□□□ 1.78
SLC6A11P48066 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
SLC6A11P48066 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
SLC6A11P48066 PEX7-203ENST00000541292 945 ntTSL 5 BASIC26.17■■□□□ 1.78
SLC6A11P48066 ABHD17AP5-201ENST00000580133 923 ntBASIC26.17■■□□□ 1.78
SLC6A11P48066 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC26.17■■□□□ 1.78
SLC6A11P48066 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC26.17■■□□□ 1.78
SLC6A11P48066 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC26.16■■□□□ 1.78
SLC6A11P48066 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
SLC6A11P48066 MEST-211ENST00000437945 1455 ntTSL 5 BASIC26.16■■□□□ 1.78
SLC6A11P48066 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC26.15■■□□□ 1.78
SLC6A11P48066 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC26.15■■□□□ 1.78
SLC6A11P48066 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
SLC6A11P48066 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC26.15■■□□□ 1.78
SLC6A11P48066 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC26.15■■□□□ 1.78
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms