Protein–RNA interactions for Protein: P06753

TPM3, Tropomyosin alpha-3 chain, humanhuman

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P06753 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC28.6■■■□□ 2.17
TPM3P06753 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC28.6■■■□□ 2.17
TPM3P06753 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC28.59■■■□□ 2.17
TPM3P06753 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC28.58■■■□□ 2.17
TPM3P06753 PROC-203ENST00000409048 1586 ntTSL 5 BASIC28.58■■■□□ 2.17
TPM3P06753 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC28.58■■■□□ 2.17
TPM3P06753 AL449106.1-201ENST00000608517 1980 ntBASIC28.57■■■□□ 2.16
TPM3P06753 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC28.57■■■□□ 2.16
TPM3P06753 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC28.57■■■□□ 2.16
TPM3P06753 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC28.56■■■□□ 2.16
TPM3P06753 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC28.56■■■□□ 2.16
TPM3P06753 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC28.55■■■□□ 2.16
TPM3P06753 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC28.55■■■□□ 2.16
TPM3P06753 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC28.55■■■□□ 2.16
TPM3P06753 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC28.55■■■□□ 2.16
TPM3P06753 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC28.54■■■□□ 2.16
TPM3P06753 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC28.54■■■□□ 2.16
TPM3P06753 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC28.54■■■□□ 2.16
TPM3P06753 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC28.54■■■□□ 2.16
TPM3P06753 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC28.53■■■□□ 2.16
TPM3P06753 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC28.53■■■□□ 2.16
TPM3P06753 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC28.53■■■□□ 2.16
TPM3P06753 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC28.52■■■□□ 2.16
TPM3P06753 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC28.52■■■□□ 2.16
TPM3P06753 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC28.52■■■□□ 2.16
TPM3P06753 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC28.52■■■□□ 2.16
TPM3P06753 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC28.52■■■□□ 2.16
TPM3P06753 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC28.51■■■□□ 2.15
TPM3P06753 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC28.51■■■□□ 2.15
TPM3P06753 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC28.51■■■□□ 2.15
TPM3P06753 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC28.51■■■□□ 2.15
TPM3P06753 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC28.51■■■□□ 2.15
TPM3P06753 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC28.51■■■□□ 2.15
TPM3P06753 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC28.51■■■□□ 2.15
TPM3P06753 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC28.5■■■□□ 2.15
TPM3P06753 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC28.5■■■□□ 2.15
TPM3P06753 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC28.5■■■□□ 2.15
TPM3P06753 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC28.49■■■□□ 2.15
TPM3P06753 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC28.48■■■□□ 2.15
TPM3P06753 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC28.47■■■□□ 2.15
TPM3P06753 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC28.47■■■□□ 2.15
TPM3P06753 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC28.47■■■□□ 2.15
TPM3P06753 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC28.47■■■□□ 2.15
TPM3P06753 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC28.47■■■□□ 2.15
TPM3P06753 AP004833.2-201ENST00000532228 1454 ntBASIC28.46■■■□□ 2.15
TPM3P06753 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC28.46■■■□□ 2.15
TPM3P06753 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC28.46■■■□□ 2.15
TPM3P06753 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC28.45■■■□□ 2.15
TPM3P06753 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC28.45■■■□□ 2.15
TPM3P06753 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC28.45■■■□□ 2.15
TPM3P06753 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC28.45■■■□□ 2.14
TPM3P06753 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC28.44■■■□□ 2.14
TPM3P06753 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC28.44■■■□□ 2.14
TPM3P06753 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC28.43■■■□□ 2.14
TPM3P06753 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC28.43■■■□□ 2.14
TPM3P06753 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC28.42■■■□□ 2.14
TPM3P06753 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
TPM3P06753 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
TPM3P06753 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC28.42■■■□□ 2.14
TPM3P06753 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
TPM3P06753 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC28.41■■■□□ 2.14
TPM3P06753 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC28.41■■■□□ 2.14
TPM3P06753 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC28.41■■■□□ 2.14
TPM3P06753 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC28.4■■■□□ 2.14
TPM3P06753 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC28.4■■■□□ 2.14
TPM3P06753 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC28.4■■■□□ 2.14
TPM3P06753 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC28.4■■■□□ 2.14
TPM3P06753 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC28.39■■■□□ 2.14
TPM3P06753 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC28.39■■■□□ 2.14
TPM3P06753 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC28.39■■■□□ 2.14
TPM3P06753 LINC01003-201ENST00000564834 1764 ntBASIC28.39■■■□□ 2.13
TPM3P06753 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC28.38■■■□□ 2.13
TPM3P06753 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC28.38■■■□□ 2.13
TPM3P06753 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC28.38■■■□□ 2.13
TPM3P06753 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC28.38■■■□□ 2.13
TPM3P06753 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
TPM3P06753 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC28.37■■■□□ 2.13
TPM3P06753 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
TPM3P06753 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC28.37■■■□□ 2.13
TPM3P06753 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC28.37■■■□□ 2.13
TPM3P06753 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
TPM3P06753 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
TPM3P06753 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC28.35■■■□□ 2.13
TPM3P06753 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
TPM3P06753 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
TPM3P06753 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC28.34■■■□□ 2.13
TPM3P06753 PKM-203ENST00000389093 2279 ntTSL 5 BASIC28.34■■■□□ 2.13
TPM3P06753 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC28.34■■■□□ 2.13
TPM3P06753 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
TPM3P06753 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
TPM3P06753 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC28.33■■■□□ 2.13
TPM3P06753 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
TPM3P06753 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.12
TPM3P06753 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC28.32■■■□□ 2.12
TPM3P06753 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC28.32■■■□□ 2.12
TPM3P06753 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC28.31■■■□□ 2.12
TPM3P06753 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC28.31■■■□□ 2.12
TPM3P06753 PKM-204ENST00000449901 2526 ntTSL 2 BASIC28.31■■■□□ 2.12
TPM3P06753 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC28.3■■■□□ 2.12
TPM3P06753 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms