Protein–RNA interactions for Protein: O60896

RAMP3, Receptor activity-modifying protein 3, humanhuman

Predictions only

Length 148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAMP3O60896 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
RAMP3O60896 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC20.92■□□□□ 0.94
RAMP3O60896 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
RAMP3O60896 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
RAMP3O60896 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
RAMP3O60896 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
RAMP3O60896 AL162393.1-201ENST00000437852 946 ntBASIC20.92■□□□□ 0.94
RAMP3O60896 HNRNPLP2-201ENST00000568980 1570 ntBASIC20.92■□□□□ 0.94
RAMP3O60896 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
RAMP3O60896 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
RAMP3O60896 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
RAMP3O60896 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
RAMP3O60896 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
RAMP3O60896 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
RAMP3O60896 PROC-203ENST00000409048 1586 ntTSL 5 BASIC20.91■□□□□ 0.94
RAMP3O60896 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
RAMP3O60896 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
RAMP3O60896 BX255925.1-201ENST00000566954 1854 ntBASIC20.9■□□□□ 0.94
RAMP3O60896 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC20.9■□□□□ 0.94
RAMP3O60896 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
RAMP3O60896 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC20.89■□□□□ 0.94
RAMP3O60896 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
RAMP3O60896 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC20.89■□□□□ 0.93
RAMP3O60896 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
RAMP3O60896 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RAMP3O60896 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RAMP3O60896 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RAMP3O60896 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
RAMP3O60896 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RAMP3O60896 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC20.88■□□□□ 0.93
RAMP3O60896 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RAMP3O60896 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RAMP3O60896 MIR3665-201ENST00000578708 105 ntBASIC20.87■□□□□ 0.93
RAMP3O60896 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
RAMP3O60896 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC20.87■□□□□ 0.93
RAMP3O60896 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RAMP3O60896 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RAMP3O60896 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
RAMP3O60896 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC20.86■□□□□ 0.93
RAMP3O60896 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
RAMP3O60896 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
RAMP3O60896 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
RAMP3O60896 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC20.86■□□□□ 0.93
RAMP3O60896 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
RAMP3O60896 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
RAMP3O60896 AC100797.4-201ENST00000631653 1827 ntBASIC20.85■□□□□ 0.93
RAMP3O60896 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC20.85■□□□□ 0.93
RAMP3O60896 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC20.85■□□□□ 0.93
RAMP3O60896 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
RAMP3O60896 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC20.84■□□□□ 0.93
RAMP3O60896 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC20.84■□□□□ 0.93
RAMP3O60896 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
RAMP3O60896 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
RAMP3O60896 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
RAMP3O60896 NRG1-221ENST00000614767 762 ntTSL 5 BASIC20.83■□□□□ 0.93
RAMP3O60896 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.93
RAMP3O60896 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC20.83■□□□□ 0.92
RAMP3O60896 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RAMP3O60896 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RAMP3O60896 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC20.82■□□□□ 0.92
RAMP3O60896 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RAMP3O60896 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
RAMP3O60896 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RAMP3O60896 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RAMP3O60896 MIR762-201ENST00000390236 83 ntBASIC20.81■□□□□ 0.92
RAMP3O60896 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC20.81■□□□□ 0.92
RAMP3O60896 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
RAMP3O60896 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
RAMP3O60896 LINC01003-201ENST00000564834 1764 ntBASIC20.81■□□□□ 0.92
RAMP3O60896 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC20.81■□□□□ 0.92
RAMP3O60896 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
RAMP3O60896 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RAMP3O60896 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC20.8■□□□□ 0.92
RAMP3O60896 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RAMP3O60896 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
RAMP3O60896 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
RAMP3O60896 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
RAMP3O60896 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC20.79■□□□□ 0.92
RAMP3O60896 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC20.79■□□□□ 0.92
RAMP3O60896 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RAMP3O60896 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
RAMP3O60896 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
RAMP3O60896 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC20.78■□□□□ 0.92
RAMP3O60896 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
RAMP3O60896 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC20.77■□□□□ 0.92
RAMP3O60896 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC20.77■□□□□ 0.92
RAMP3O60896 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
RAMP3O60896 SHF-208ENST00000560734 1731 ntTSL 3 BASIC20.76■□□□□ 0.91
RAMP3O60896 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
RAMP3O60896 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
RAMP3O60896 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC20.76■□□□□ 0.91
RAMP3O60896 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC20.76■□□□□ 0.91
RAMP3O60896 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC20.75■□□□□ 0.91
RAMP3O60896 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RAMP3O60896 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
RAMP3O60896 CHML-205ENST00000638160 705 ntTSL 3 BASIC20.75■□□□□ 0.91
RAMP3O60896 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
RAMP3O60896 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RAMP3O60896 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
RAMP3O60896 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms