Protein–RNA interactions for Protein: A6NI15

MSGN1, Mesogenin-1, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSGN1A6NI15 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
MSGN1A6NI15 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
MSGN1A6NI15 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC21.12■□□□□ 0.97
MSGN1A6NI15 AC136428.2-201ENST00000563187 214 ntBASIC21.12■□□□□ 0.97
MSGN1A6NI15 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
MSGN1A6NI15 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC21.12■□□□□ 0.97
MSGN1A6NI15 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
MSGN1A6NI15 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC21.12■□□□□ 0.97
MSGN1A6NI15 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
MSGN1A6NI15 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
MSGN1A6NI15 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC21.11■□□□□ 0.97
MSGN1A6NI15 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC21.11■□□□□ 0.97
MSGN1A6NI15 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC21.11■□□□□ 0.97
MSGN1A6NI15 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC21.1■□□□□ 0.97
MSGN1A6NI15 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
MSGN1A6NI15 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC21.1■□□□□ 0.97
MSGN1A6NI15 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
MSGN1A6NI15 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC21.1■□□□□ 0.97
MSGN1A6NI15 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
MSGN1A6NI15 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC21.1■□□□□ 0.97
MSGN1A6NI15 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
MSGN1A6NI15 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
MSGN1A6NI15 AL391121.1-201ENST00000607967 1349 ntBASIC21.09■□□□□ 0.97
MSGN1A6NI15 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
MSGN1A6NI15 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
MSGN1A6NI15 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
MSGN1A6NI15 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
MSGN1A6NI15 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
MSGN1A6NI15 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
MSGN1A6NI15 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
MSGN1A6NI15 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
MSGN1A6NI15 CAHM-201ENST00000604200 896 ntBASIC21.08■□□□□ 0.97
MSGN1A6NI15 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
MSGN1A6NI15 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.96
MSGN1A6NI15 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
MSGN1A6NI15 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
MSGN1A6NI15 EBPL-202ENST00000378268 680 ntTSL 3 BASIC21.07■□□□□ 0.96
MSGN1A6NI15 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC21.07■□□□□ 0.96
MSGN1A6NI15 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
MSGN1A6NI15 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
MSGN1A6NI15 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
MSGN1A6NI15 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC21.07■□□□□ 0.96
MSGN1A6NI15 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
MSGN1A6NI15 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC21.07■□□□□ 0.96
MSGN1A6NI15 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
MSGN1A6NI15 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
MSGN1A6NI15 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
MSGN1A6NI15 PKM-203ENST00000389093 2279 ntTSL 5 BASIC21.06■□□□□ 0.96
MSGN1A6NI15 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
MSGN1A6NI15 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC21.06■□□□□ 0.96
MSGN1A6NI15 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC21.06■□□□□ 0.96
MSGN1A6NI15 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
MSGN1A6NI15 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC21.05■□□□□ 0.96
MSGN1A6NI15 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
MSGN1A6NI15 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
MSGN1A6NI15 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC21.05■□□□□ 0.96
MSGN1A6NI15 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC21.05■□□□□ 0.96
MSGN1A6NI15 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
MSGN1A6NI15 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC21.04■□□□□ 0.96
MSGN1A6NI15 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
MSGN1A6NI15 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
MSGN1A6NI15 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
MSGN1A6NI15 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
MSGN1A6NI15 SHF-208ENST00000560734 1731 ntTSL 3 BASIC21.04■□□□□ 0.96
MSGN1A6NI15 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC21.02■□□□□ 0.96
MSGN1A6NI15 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
MSGN1A6NI15 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
MSGN1A6NI15 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
MSGN1A6NI15 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
MSGN1A6NI15 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
MSGN1A6NI15 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC21.01■□□□□ 0.95
MSGN1A6NI15 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
MSGN1A6NI15 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC21.01■□□□□ 0.95
MSGN1A6NI15 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
MSGN1A6NI15 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
MSGN1A6NI15 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
MSGN1A6NI15 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
MSGN1A6NI15 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
MSGN1A6NI15 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
MSGN1A6NI15 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
MSGN1A6NI15 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC20.98■□□□□ 0.95
MSGN1A6NI15 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
MSGN1A6NI15 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
MSGN1A6NI15 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
MSGN1A6NI15 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC20.96■□□□□ 0.95
MSGN1A6NI15 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
MSGN1A6NI15 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
MSGN1A6NI15 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
MSGN1A6NI15 DENR-202ENST00000455982 1052 ntTSL 5 BASIC20.96■□□□□ 0.95
MSGN1A6NI15 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
MSGN1A6NI15 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
MSGN1A6NI15 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
MSGN1A6NI15 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
MSGN1A6NI15 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
MSGN1A6NI15 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC20.95■□□□□ 0.94
MSGN1A6NI15 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
MSGN1A6NI15 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
MSGN1A6NI15 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
MSGN1A6NI15 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
MSGN1A6NI15 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 8.9 ms