Protein–RNA interactions for Protein: A0A0B7P3V8

TY4B-P, Transposon Ty4-P Gag-Pol polyprotein, yeast

Predictions only

Length 1,104 aa.

Protein		RNA				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	UniProt Accession	Gene	Ensembl Transcript ID	Length	Transcript Status	Prediction Score	Prediction z-Score	Detected Interaction
TY4B-P	A0A0B7P3V8	SNZ1	YMR096W	894 nt		8.32	□□□□□ -1.08
TY4B-P	A0A0B7P3V8	YNR064C	YNR064C	873 nt		8.32	□□□□□ -1.08
TY4B-P	A0A0B7P3V8	CCT5	YJR064W	1689 nt		8.32	□□□□□ -1.08
TY4B-P	A0A0B7P3V8	MSB3	YNL293W	1902 nt		8.32	□□□□□ -1.08
TY4B-P	A0A0B7P3V8	AGP3	YFL055W	1677 nt		8.31	□□□□□ -1.08
TY4B-P	A0A0B7P3V8	MET1	YKR069W	1782 nt		8.31	□□□□□ -1.08
TY4B-P	A0A0B7P3V8	ADE16	YLR028C	1776 nt		8.31	□□□□□ -1.08
TY4B-P	A0A0B7P3V8	tR(UCU)Q1	tR(UCU)Q1	73 nt		8.31	□□□□□ -1.08
TY4B-P	A0A0B7P3V8	SNX3	YOR357C	489 nt		8.31	□□□□□ -1.08
TY4B-P	A0A0B7P3V8	YPR126C	YPR126C	309 nt		8.31	□□□□□ -1.08
TY4B-P	A0A0B7P3V8	HXT13	YEL069C	1695 nt		8.3	□□□□□ -1.08
TY4B-P	A0A0B7P3V8	ADH7	YCR105W	1086 nt		8.3	□□□□□ -1.08
TY4B-P	A0A0B7P3V8	ELO1	YJL196C	933 nt		8.3	□□□□□ -1.08
TY4B-P	A0A0B7P3V8	UBC12	YLR306W	567 nt		8.3	□□□□□ -1.08
TY4B-P	A0A0B7P3V8	YMR262W	YMR262W	942 nt		8.3	□□□□□ -1.08
TY4B-P	A0A0B7P3V8	NDJ1	YOL104C	1059 nt		8.3	□□□□□ -1.08
TY4B-P	A0A0B7P3V8	DAL7	YIR031C	1665 nt		8.3	□□□□□ -1.08
TY4B-P	A0A0B7P3V8	KRR1	YCL059C	951 nt		8.29	□□□□□ -1.08
TY4B-P	A0A0B7P3V8	ATP6	Q0085	780 nt		8.29	□□□□□ -1.08
TY4B-P	A0A0B7P3V8	Q0142	Q0142	177 nt		8.29	□□□□□ -1.08
TY4B-P	A0A0B7P3V8	CPD1	YGR247W	720 nt		8.29	□□□□□ -1.08
TY4B-P	A0A0B7P3V8	ARC19	YKL013C	516 nt		8.29	□□□□□ -1.08
TY4B-P	A0A0B7P3V8	YFR036W-A	YFR036W-A	651 nt		8.28	□□□□□ -1.08
TY4B-P	A0A0B7P3V8	OPI3	YJR073C	621 nt		8.28	□□□□□ -1.08
TY4B-P	A0A0B7P3V8	IML3	YBR107C	738 nt		8.28	□□□□□ -1.08
TY4B-P	A0A0B7P3V8	YMR265C	YMR265C	1386 nt		8.27	□□□□□ -1.09
TY4B-P	A0A0B7P3V8	YNL040W	YNL040W	1371 nt		8.27	□□□□□ -1.09
TY4B-P	A0A0B7P3V8	TAF4	YMR005W	1167 nt		8.27	□□□□□ -1.09
TY4B-P	A0A0B7P3V8	RPC31	YNL151C	756 nt		8.27	□□□□□ -1.09
TY4B-P	A0A0B7P3V8	SMC5	YOL034W	3282 nt		8.27	□□□□□ -1.09
TY4B-P	A0A0B7P3V8	Q0255	Q0255	1419 nt		8.27	□□□□□ -1.09
TY4B-P	A0A0B7P3V8	CHA1	YCL064C	1083 nt		8.26	□□□□□ -1.09
TY4B-P	A0A0B7P3V8	TVP23	YDR084C	600 nt		8.26	□□□□□ -1.09
TY4B-P	A0A0B7P3V8	BIM1	YER016W	1035 nt		8.26	□□□□□ -1.09
TY4B-P	A0A0B7P3V8	SUA5	YGL169W	1281 nt		8.26	□□□□□ -1.09
TY4B-P	A0A0B7P3V8	MRS3	YJL133W	945 nt		8.26	□□□□□ -1.09
TY4B-P	A0A0B7P3V8	SED5	YLR026C	1023 nt		8.26	□□□□□ -1.09
TY4B-P	A0A0B7P3V8	ATP10	YLR393W	840 nt		8.26	□□□□□ -1.09
TY4B-P	A0A0B7P3V8	SIR2	YDL042C	1689 nt		8.26	□□□□□ -1.09
TY4B-P	A0A0B7P3V8	KEL3	YPL263C	1956 nt		8.26	□□□□□ -1.09
TY4B-P	A0A0B7P3V8	ITR1	YDR497C	1755 nt		8.25	□□□□□ -1.09
TY4B-P	A0A0B7P3V8	PFS2	YNL317W	1398 nt		8.25	□□□□□ -1.09
TY4B-P	A0A0B7P3V8	BAP3	YDR046C	1815 nt		8.25	□□□□□ -1.09
TY4B-P	A0A0B7P3V8	CRN1	YLR429W	1956 nt		8.25	□□□□□ -1.09
TY4B-P	A0A0B7P3V8	RPN14	YGL004C	1254 nt		8.25	□□□□□ -1.09
TY4B-P	A0A0B7P3V8	SPS100	YHR139C	981 nt		8.25	□□□□□ -1.09
TY4B-P	A0A0B7P3V8	PAU15	YIR041W	375 nt		8.25	□□□□□ -1.09
TY4B-P	A0A0B7P3V8	HAP5	YOR358W	729 nt		8.25	□□□□□ -1.09
TY4B-P	A0A0B7P3V8	RIM2	YBR192W	1134 nt		8.25	□□□□□ -1.09
TY4B-P	A0A0B7P3V8	CTI6	YPL181W	1521 nt		8.24	□□□□□ -1.09
TY4B-P	A0A0B7P3V8	MMS21	YEL019C	804 nt		8.24	□□□□□ -1.09
TY4B-P	A0A0B7P3V8	MPS2	YGL075C	1164 nt		8.23	□□□□□ -1.09
TY4B-P	A0A0B7P3V8	COX3	Q0275	810 nt		8.23	□□□□□ -1.09
TY4B-P	A0A0B7P3V8	PEX27	YOR193W	1131 nt		8.23	□□□□□ -1.09
TY4B-P	A0A0B7P3V8	SUV3	YPL029W	2214 nt		8.22	□□□□□ -1.09
TY4B-P	A0A0B7P3V8	YRF1-1	YDR545W	5391 nt		8.22	□□□□□ -1.09
TY4B-P	A0A0B7P3V8	YRF1-5	YLR467W	5391 nt		8.22	□□□□□ -1.09
TY4B-P	A0A0B7P3V8	YRF1-8	YOR396W	5391 nt		8.22	□□□□□ -1.09
TY4B-P	A0A0B7P3V8	RMA1	YKL132C	1293 nt		8.22	□□□□□ -1.09
TY4B-P	A0A0B7P3V8	DPH5	YLR172C	903 nt		8.22	□□□□□ -1.09
TY4B-P	A0A0B7P3V8	YLR311C	YLR311C	348 nt		8.22	□□□□□ -1.09
TY4B-P	A0A0B7P3V8	ADH6	YMR318C	1083 nt		8.22	□□□□□ -1.09
TY4B-P	A0A0B7P3V8	MRI1	YPR118W	1236 nt		8.22	□□□□□ -1.09
TY4B-P	A0A0B7P3V8	DPL1	YDR294C	1770 nt		8.22	□□□□□ -1.09
TY4B-P	A0A0B7P3V8	OCA1	YNL099C	717 nt		8.21	□□□□□ -1.1
TY4B-P	A0A0B7P3V8	ATO2	YNR002C	849 nt		8.21	□□□□□ -1.1
TY4B-P	A0A0B7P3V8	snR4	snR4	186 nt		8.21	□□□□□ -1.1
TY4B-P	A0A0B7P3V8	GAT1	YFL021W	1533 nt		8.2	□□□□□ -1.1
TY4B-P	A0A0B7P3V8	RAD51	YER095W	1203 nt		8.2	□□□□□ -1.1
TY4B-P	A0A0B7P3V8	YGL188C	YGL188C	174 nt		8.2	□□□□□ -1.1
TY4B-P	A0A0B7P3V8	TAF13	YML098W	504 nt		8.2	□□□□□ -1.1
TY4B-P	A0A0B7P3V8	ORT1	YOR130C	879 nt		8.2	□□□□□ -1.1
TY4B-P	A0A0B7P3V8	COA2	YPL189C-A	207 nt		8.2	□□□□□ -1.1
TY4B-P	A0A0B7P3V8	PZF1	YPR186C	1290 nt		8.2	□□□□□ -1.1
TY4B-P	A0A0B7P3V8	snR31	snR31	225 nt		8.2	□□□□□ -1.1
TY4B-P	A0A0B7P3V8	HSV2	YGR223C	1347 nt		8.2	□□□□□ -1.1
TY4B-P	A0A0B7P3V8	MAS2	YHR024C	1449 nt		8.2	□□□□□ -1.1
TY4B-P	A0A0B7P3V8	HEL1	YKR017C	1656 nt		8.19	□□□□□ -1.1
TY4B-P	A0A0B7P3V8	RRP1	YDR087C	837 nt		8.19	□□□□□ -1.1
TY4B-P	A0A0B7P3V8	MHF1	YOL086W-A	273 nt		8.19	□□□□□ -1.1
TY4B-P	A0A0B7P3V8	HAL5	YJL165C	2568 nt		8.19	□□□□□ -1.1
TY4B-P	A0A0B7P3V8	CKI1	YLR133W	1749 nt		8.19	□□□□□ -1.1
TY4B-P	A0A0B7P3V8	YCR061W	YCR061W	1896 nt		8.17	□□□□□ -1.1
TY4B-P	A0A0B7P3V8	INH1	YDL181W	258 nt		8.17	□□□□□ -1.1
TY4B-P	A0A0B7P3V8	CTR1	YPR124W	1221 nt		8.17	□□□□□ -1.1
TY4B-P	A0A0B7P3V8	tS(GCU)L	tS(GCU)L	80 nt		8.16	□□□□□ -1.1
TY4B-P	A0A0B7P3V8	ENO2	YHR174W	1314 nt		8.16	□□□□□ -1.1
TY4B-P	A0A0B7P3V8	SWT21	YNL187W	1074 nt		8.16	□□□□□ -1.1
TY4B-P	A0A0B7P3V8	CRC1	YOR100C	984 nt		8.16	□□□□□ -1.1
TY4B-P	A0A0B7P3V8	CIR2	YOR356W	1896 nt		8.16	□□□□□ -1.1
TY4B-P	A0A0B7P3V8	VPS28	YPL065W	729 nt		8.16	□□□□□ -1.1
TY4B-P	A0A0B7P3V8	LEU4	YNL104C	1860 nt		8.15	□□□□□ -1.1
TY4B-P	A0A0B7P3V8	PRC1	YMR297W	1599 nt		8.15	□□□□□ -1.1
TY4B-P	A0A0B7P3V8	YDL157C	YDL157C	357 nt		8.15	□□□□□ -1.1
TY4B-P	A0A0B7P3V8	DIA1	YMR316W	1011 nt		8.15	□□□□□ -1.1
TY4B-P	A0A0B7P3V8	YOR169C	YOR169C	465 nt		8.15	□□□□□ -1.1
TY4B-P	A0A0B7P3V8	YPR150W	YPR150W	522 nt		8.15	□□□□□ -1.1
TY4B-P	A0A0B7P3V8	AMF1	YOR378W	1548 nt		8.14	□□□□□ -1.11
TY4B-P	A0A0B7P3V8	POT1	YIL160C	1254 nt		8.14	□□□□□ -1.11
TY4B-P	A0A0B7P3V8	NEJ1	YLR265C	1029 nt		8.14	□□□□□ -1.11

Retrieved 100 of 7,029 protein–RNA pairs in 42.1 ms