Protein–RNA interactions for Protein: Q9HBT6

CDH20, Cadherin-20, humanhuman

Predictions only

Length 801 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH20Q9HBT6 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CDH20Q9HBT6 ITM2C-210ENST00000620962 501 ntBASIC17.12■□□□□ 0.33
CDH20Q9HBT6 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC17.12■□□□□ 0.33
CDH20Q9HBT6 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CDH20Q9HBT6 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CDH20Q9HBT6 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CDH20Q9HBT6 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CDH20Q9HBT6 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CDH20Q9HBT6 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CDH20Q9HBT6 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CDH20Q9HBT6 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC17.11■□□□□ 0.33
CDH20Q9HBT6 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CDH20Q9HBT6 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CDH20Q9HBT6 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CDH20Q9HBT6 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
CDH20Q9HBT6 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC17.11■□□□□ 0.33
CDH20Q9HBT6 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC17.11■□□□□ 0.33
CDH20Q9HBT6 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CDH20Q9HBT6 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC17.11■□□□□ 0.33
CDH20Q9HBT6 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CDH20Q9HBT6 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CDH20Q9HBT6 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CDH20Q9HBT6 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC17.11■□□□□ 0.33
CDH20Q9HBT6 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CDH20Q9HBT6 ABHD17AP1-201ENST00000358206 933 ntBASIC17.11■□□□□ 0.33
CDH20Q9HBT6 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CDH20Q9HBT6 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC17.11■□□□□ 0.33
CDH20Q9HBT6 AC233263.1-201ENST00000578059 224 ntBASIC17.11■□□□□ 0.33
CDH20Q9HBT6 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
CDH20Q9HBT6 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC17.11■□□□□ 0.33
CDH20Q9HBT6 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC17.11■□□□□ 0.33
CDH20Q9HBT6 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CDH20Q9HBT6 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CDH20Q9HBT6 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CDH20Q9HBT6 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CDH20Q9HBT6 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CDH20Q9HBT6 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
CDH20Q9HBT6 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CDH20Q9HBT6 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CDH20Q9HBT6 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CDH20Q9HBT6 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CDH20Q9HBT6 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CDH20Q9HBT6 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CDH20Q9HBT6 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CDH20Q9HBT6 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC17.1■□□□□ 0.33
CDH20Q9HBT6 AC239809.2-201ENST00000415381 517 ntBASIC17.1■□□□□ 0.33
CDH20Q9HBT6 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC17.1■□□□□ 0.33
CDH20Q9HBT6 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC17.1■□□□□ 0.33
CDH20Q9HBT6 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC17.1■□□□□ 0.33
CDH20Q9HBT6 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
CDH20Q9HBT6 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
CDH20Q9HBT6 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC17.1■□□□□ 0.33
CDH20Q9HBT6 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
CDH20Q9HBT6 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
CDH20Q9HBT6 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC17.1■□□□□ 0.33
CDH20Q9HBT6 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CDH20Q9HBT6 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC17.1■□□□□ 0.33
CDH20Q9HBT6 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CDH20Q9HBT6 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
CDH20Q9HBT6 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC17.1■□□□□ 0.33
CDH20Q9HBT6 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
CDH20Q9HBT6 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CDH20Q9HBT6 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
CDH20Q9HBT6 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CDH20Q9HBT6 BCL2-203ENST00000589955 5011 ntBASIC17.09■□□□□ 0.33
CDH20Q9HBT6 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CDH20Q9HBT6 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
CDH20Q9HBT6 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CDH20Q9HBT6 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
CDH20Q9HBT6 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
CDH20Q9HBT6 TREX2-204ENST00000370212 861 ntTSL 5 BASIC17.09■□□□□ 0.33
CDH20Q9HBT6 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
CDH20Q9HBT6 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CDH20Q9HBT6 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
CDH20Q9HBT6 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
CDH20Q9HBT6 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC17.09■□□□□ 0.33
CDH20Q9HBT6 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC17.09■□□□□ 0.33
CDH20Q9HBT6 MTDHP1-201ENST00000605323 784 ntBASIC17.09■□□□□ 0.33
CDH20Q9HBT6 MMD2-204ENST00000612910 778 ntTSL 5 BASIC17.09■□□□□ 0.33
CDH20Q9HBT6 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
CDH20Q9HBT6 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
CDH20Q9HBT6 AP006587.1-201ENST00000534129 1502 ntBASIC17.09■□□□□ 0.33
CDH20Q9HBT6 TFP1-202ENST00000475455 1573 ntBASIC17.09■□□□□ 0.33
CDH20Q9HBT6 AC009237.14-201ENST00000609975 1594 ntBASIC17.09■□□□□ 0.33
CDH20Q9HBT6 TMEM179-206ENST00000616017 1645 ntBASIC17.09■□□□□ 0.33
CDH20Q9HBT6 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CDH20Q9HBT6 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CDH20Q9HBT6 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC17.09■□□□□ 0.33
CDH20Q9HBT6 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC17.09■□□□□ 0.33
CDH20Q9HBT6 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CDH20Q9HBT6 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CDH20Q9HBT6 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CDH20Q9HBT6 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CDH20Q9HBT6 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CDH20Q9HBT6 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CDH20Q9HBT6 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CDH20Q9HBT6 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CDH20Q9HBT6 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
CDH20Q9HBT6 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CDH20Q9HBT6 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 73.4 ms