Protein–RNA interactions for Protein: P0C7V0

LINC00271, Putative uncharacterized protein encoded by LINC00271, humanhuman

Predictions only

Length 271 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00271P0C7V0 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC20.81■□□□□ 0.92
LINC00271P0C7V0 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
LINC00271P0C7V0 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
LINC00271P0C7V0 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
LINC00271P0C7V0 SMG8-203ENST00000578922 2178 ntBASIC20.8■□□□□ 0.92
LINC00271P0C7V0 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC20.8■□□□□ 0.92
LINC00271P0C7V0 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
LINC00271P0C7V0 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC20.8■□□□□ 0.92
LINC00271P0C7V0 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
LINC00271P0C7V0 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
LINC00271P0C7V0 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC20.8■□□□□ 0.92
LINC00271P0C7V0 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
LINC00271P0C7V0 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC20.8■□□□□ 0.92
LINC00271P0C7V0 PTK2-216ENST00000519881 863 ntTSL 3 BASIC20.8■□□□□ 0.92
LINC00271P0C7V0 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC20.8■□□□□ 0.92
LINC00271P0C7V0 DFFB-212ENST00000625756 649 ntTSL 5 BASIC20.8■□□□□ 0.92
LINC00271P0C7V0 AL031432.5-201ENST00000641059 760 ntBASIC20.8■□□□□ 0.92
LINC00271P0C7V0 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC20.8■□□□□ 0.92
LINC00271P0C7V0 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
LINC00271P0C7V0 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC20.8■□□□□ 0.92
LINC00271P0C7V0 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
LINC00271P0C7V0 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
LINC00271P0C7V0 KRT8P41-201ENST00000533985 1514 ntBASIC20.79■□□□□ 0.92
LINC00271P0C7V0 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC20.79■□□□□ 0.92
LINC00271P0C7V0 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC20.79■□□□□ 0.92
LINC00271P0C7V0 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
LINC00271P0C7V0 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
LINC00271P0C7V0 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
LINC00271P0C7V0 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC20.79■□□□□ 0.92
LINC00271P0C7V0 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
LINC00271P0C7V0 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC20.79■□□□□ 0.92
LINC00271P0C7V0 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
LINC00271P0C7V0 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
LINC00271P0C7V0 AL160286.2-201ENST00000567150 934 ntBASIC20.79■□□□□ 0.92
LINC00271P0C7V0 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC20.79■□□□□ 0.92
LINC00271P0C7V0 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC20.79■□□□□ 0.92
LINC00271P0C7V0 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
LINC00271P0C7V0 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC20.79■□□□□ 0.92
LINC00271P0C7V0 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
LINC00271P0C7V0 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC20.78■□□□□ 0.92
LINC00271P0C7V0 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
LINC00271P0C7V0 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
LINC00271P0C7V0 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
LINC00271P0C7V0 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
LINC00271P0C7V0 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
LINC00271P0C7V0 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
LINC00271P0C7V0 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
LINC00271P0C7V0 TPM4P1-201ENST00000436100 807 ntBASIC20.78■□□□□ 0.92
LINC00271P0C7V0 AP003041.3-201ENST00000527151 707 ntBASIC20.78■□□□□ 0.92
LINC00271P0C7V0 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
LINC00271P0C7V0 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
LINC00271P0C7V0 LINC01465-201ENST00000408887 1940 ntBASIC20.78■□□□□ 0.92
LINC00271P0C7V0 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
LINC00271P0C7V0 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
LINC00271P0C7V0 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
LINC00271P0C7V0 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC20.78■□□□□ 0.92
LINC00271P0C7V0 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
LINC00271P0C7V0 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC20.78■□□□□ 0.92
LINC00271P0C7V0 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC20.78■□□□□ 0.92
LINC00271P0C7V0 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
LINC00271P0C7V0 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
LINC00271P0C7V0 NME1-207ENST00000480143 964 ntTSL 2 BASIC20.77■□□□□ 0.92
LINC00271P0C7V0 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC20.77■□□□□ 0.92
LINC00271P0C7V0 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC20.77■□□□□ 0.92
LINC00271P0C7V0 CKBP1-201ENST00000565489 1086 ntBASIC20.77■□□□□ 0.92
LINC00271P0C7V0 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC20.77■□□□□ 0.92
LINC00271P0C7V0 AL512604.3-201ENST00000569583 964 ntBASIC20.77■□□□□ 0.92
LINC00271P0C7V0 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
LINC00271P0C7V0 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC20.77■□□□□ 0.92
LINC00271P0C7V0 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
LINC00271P0C7V0 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
LINC00271P0C7V0 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.91
LINC00271P0C7V0 KRT8P45-201ENST00000414328 1447 ntBASIC20.77■□□□□ 0.91
LINC00271P0C7V0 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC20.77■□□□□ 0.91
LINC00271P0C7V0 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
LINC00271P0C7V0 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
LINC00271P0C7V0 BX119927.1-201ENST00000636596 1552 ntBASIC20.76■□□□□ 0.91
LINC00271P0C7V0 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
LINC00271P0C7V0 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
LINC00271P0C7V0 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
LINC00271P0C7V0 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC20.76■□□□□ 0.91
LINC00271P0C7V0 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
LINC00271P0C7V0 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
LINC00271P0C7V0 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
LINC00271P0C7V0 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
LINC00271P0C7V0 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
LINC00271P0C7V0 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC20.76■□□□□ 0.91
LINC00271P0C7V0 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
LINC00271P0C7V0 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
LINC00271P0C7V0 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
LINC00271P0C7V0 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC20.76■□□□□ 0.91
LINC00271P0C7V0 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
LINC00271P0C7V0 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC20.76■□□□□ 0.91
LINC00271P0C7V0 HYMAI.1-201ENST00000620949 238 ntBASIC20.76■□□□□ 0.91
LINC00271P0C7V0 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC20.76■□□□□ 0.91
LINC00271P0C7V0 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC20.76■□□□□ 0.91
LINC00271P0C7V0 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC20.76■□□□□ 0.91
LINC00271P0C7V0 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
LINC00271P0C7V0 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
LINC00271P0C7V0 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms