RNA–Protein interactions for RNA: ENST00000519881.5

PTK2-216, Transcript of protein tyrosine kinase 2, humanhuman

TSL 3 BASIC

Gene PTK2, Length 863 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTK2-216ENST00000519881 NISCHQ9Y2I1 1504 aa45.62■■■■■ 4.89
PTK2-216ENST00000519881 CCDC180Q9P1Z9 1646 aa40.68■■■■■ 4.1
PTK2-216ENST00000519881 ABCC9O60706 1549 aa40.49■■■■■ 4.07
PTK2-216ENST00000519881 RB1CC1Q8TDY2 1594 aa38.61■■■■□ 3.77
PTK2-216ENST00000519881 NACADO15069 1562 aa38.45■■■■□ 3.75
PTK2-216ENST00000519881 DCAF8L2P0C7V8 631 aa38.36■■■■□ 3.73
PTK2-216ENST00000519881 MYO15BQ96JP2 1530 aa38.07■■■■□ 3.68
PTK2-216ENST00000519881 ZCCHC6Q5VYS8 1495 aaKnown RBP37.86■■■■□ 3.65
PTK2-216ENST00000519881 DNAJC5BQ9UF47 199 aa37.86■■■■□ 3.65
PTK2-216ENST00000519881 PABPN1Q86U42 306 aaKnown RBP eCLIP37.81■■■■□ 3.64
PTK2-216ENST00000519881 UNC13AQ9UPW8 1703 aa37.7■■■■□ 3.63
PTK2-216ENST00000519881 DCAF1Q9Y4B6 1507 aa37.69■■■■□ 3.62
PTK2-216ENST00000519881 BICRAQ9NZM4 1560 aa37.57■■■■□ 3.6
PTK2-216ENST00000519881 SCRIBQ14160 1630 aa37.12■■■■□ 3.53
PTK2-216ENST00000519881 SHROOM4Q9ULL8 1493 aa37.02■■■■□ 3.52
PTK2-216ENST00000519881 EIF4G1Q04637 1599 aaKnown RBP36.57■■■■□ 3.45
PTK2-216ENST00000519881 CC2D2AQ9P2K1 1620 aa36.56■■■■□ 3.44
PTK2-216ENST00000519881 CECR2Q9BXF3 1484 aa36.44■■■■□ 3.42
PTK2-216ENST00000519881 NCAPD3P42695 1498 aa35.57■■■■□ 3.28
PTK2-216ENST00000519881 ATAD2BQ9ULI0 1458 aa35.49■■■■□ 3.27
PTK2-216ENST00000519881 SMARCA4P51532 1647 aa35.46■■■■□ 3.27
PTK2-216ENST00000519881 SMARCA2P51531 1590 aa35.33■■■■□ 3.25
PTK2-216ENST00000519881 BAZ1AQ9NRL2 1556 aaPredicted RBP35.33■■■■□ 3.25
PTK2-216ENST00000519881 HMGXB3Q12766 1538 aa35.26■■■■□ 3.23
PTK2-216ENST00000519881 MROH2BQ7Z745 1585 aa35.17■■■■□ 3.22
PTK2-216ENST00000519881 PEG3Q9GZU2 1588 aa35.16■■■■□ 3.22
PTK2-216ENST00000519881 BAZ1BQ9UIG0 1483 aaKnown RBP35.1■■■■□ 3.21
PTK2-216ENST00000519881 NESP48681 1621 aa34.9■■■■□ 3.18
PTK2-216ENST00000519881 ERCC6Q03468 1493 aa34.87■■■■□ 3.17
PTK2-216ENST00000519881 CUX2O14529 1486 aa34.74■■■■□ 3.15
PTK2-216ENST00000519881 WIZO95785 1651 aa34.7■■■■□ 3.15
PTK2-216ENST00000519881 LAMC3Q9Y6N6 1575 aa34.63■■■■□ 3.13
PTK2-216ENST00000519881 RSF1Q96T23 1441 aaPredicted RBP34.57■■■■□ 3.13
PTK2-216ENST00000519881 CADPSQ9ULU8 1353 aa34.49■■■■□ 3.11
PTK2-216ENST00000519881 DNAJC5Q9H3Z4 198 aa34.48■■■■□ 3.11
PTK2-216ENST00000519881 PDS5BQ9NTI5 1447 aa34.46■■■■□ 3.11
PTK2-216ENST00000519881 THOC2Q8NI27 1593 aaKnown RBP34.42■■■■□ 3.1
PTK2-216ENST00000519881 KIF21AQ7Z4S6 1674 aa34.35■■■■□ 3.09
PTK2-216ENST00000519881 TOP2AP11388 1531 aaKnown RBP34.28■■■■□ 3.08
PTK2-216ENST00000519881 CFTRP13569 1480 aa34.16■■■■□ 3.06
PTK2-216ENST00000519881 MRC2Q9UBG0 1479 aa34.13■■■■□ 3.05
PTK2-216ENST00000519881 FANCD2Q9BXW9 1451 aa34.07■■■■□ 3.04
PTK2-216ENST00000519881 CEP164Q9UPV0 1460 aa34.04■■■■□ 3.04
PTK2-216ENST00000519881 WDR62O43379 1518 aa34.04■■■■□ 3.04
PTK2-216ENST00000519881 CCDC88BA6NC98 1476 aa33.95■■■■□ 3.03
PTK2-216ENST00000519881 URB2Q14146 1524 aaKnown RBP33.79■■■■□ 3
PTK2-216ENST00000519881 PRDM2Q13029 1718 aa33.65■■■□□ 2.98
PTK2-216ENST00000519881 TOPBP1Q92547 1522 aa33.46■■■□□ 2.95
PTK2-216ENST00000519881 ABCC8Q09428 1581 aa33.38■■■□□ 2.93
PTK2-216ENST00000519881 IFT140Q96RY7 1462 aa33.37■■■□□ 2.93
PTK2-216ENST00000519881 ZNF608Q9ULD9 1512 aaPredicted RBP33.33■■■□□ 2.93
PTK2-216ENST00000519881 DNMBPQ6XZF7 1577 aa33.32■■■□□ 2.92
PTK2-216ENST00000519881 OSCARQ8IYS5 282 aa33.26■■■□□ 2.91
PTK2-216ENST00000519881 SUPT5HO00267 1087 aaKnown RBP33.23■■■□□ 2.91
PTK2-216ENST00000519881 POLA1P09884 1462 aaPredicted RBP33.15■■■□□ 2.9
PTK2-216ENST00000519881 TARBP1Q13395 1621 aaKnown RBP33.13■■■□□ 2.89
PTK2-216ENST00000519881 EIF4G3O43432 1585 aaKnown RBP33.08■■■□□ 2.89
PTK2-216ENST00000519881 AQRO60306 1485 aaKnown RBP eCLIP33.07■■■□□ 2.883e-6■■■■□ 24.7
PTK2-216ENST00000519881 RAD54L2Q9Y4B4 1467 aa33.04■■■□□ 2.88
PTK2-216ENST00000519881 TRIM41Q8WV44 630 aa33.02■■■□□ 2.88
PTK2-216ENST00000519881 CUX1P39880 1505 aa33.01■■■□□ 2.87
PTK2-216ENST00000519881 SOGA1O94964 1423 aa33.01■■■□□ 2.87
PTK2-216ENST00000519881 FGD5Q6ZNL6 1462 aa32.97■■■□□ 2.87
PTK2-216ENST00000519881 TDRD9Q8NDG6 1382 aaKnown RBP32.93■■■□□ 2.86
PTK2-216ENST00000519881 FBLN2P98095 1184 aa32.75■■■□□ 2.83
PTK2-216ENST00000519881 WDR97A6NE52 1622 aa32.75■■■□□ 2.83
PTK2-216ENST00000519881 CHD1O14646 1710 aa32.73■■■□□ 2.83
PTK2-216ENST00000519881 RIMBP3CA6NJZ7 1639 aa32.73■■■□□ 2.83
PTK2-216ENST00000519881 RIMBP3BA6NNM3 1639 aa32.73■■■□□ 2.83
PTK2-216ENST00000519881 RIMBP3Q9UFD9 1639 aa32.73■■■□□ 2.83
PTK2-216ENST00000519881 SNAPC4Q5SXM2 1469 aa32.7■■■□□ 2.83
PTK2-216ENST00000519881 ARHGEF11O15085 1522 aa32.69■■■□□ 2.82
PTK2-216ENST00000519881 GRIN2BQ13224 1484 aa32.66■■■□□ 2.82
PTK2-216ENST00000519881 ABCA10Q8WWZ4 1543 aa32.62■■■□□ 2.81
PTK2-216ENST00000519881 MAGI1Q96QZ7 1491 aaPredicted RBP32.61■■■□□ 2.81
PTK2-216ENST00000519881 GAPVD1Q14C86 1478 aa32.59■■■□□ 2.81
PTK2-216ENST00000519881 CHMP7Q8WUX9 453 aaPredicted RBP32.57■■■□□ 2.8
PTK2-216ENST00000519881 WRNQ14191 1432 aaPredicted RBP eCLIP32.56■■■□□ 2.8
PTK2-216ENST00000519881 SYNJ2O15056 1496 aa32.52■■■□□ 2.8
PTK2-216ENST00000519881 TOP2BQ02880 1626 aa32.51■■■□□ 2.8
PTK2-216ENST00000519881 ABCA5Q8WWZ7 1642 aa32.51■■■□□ 2.79
PTK2-216ENST00000519881 SYNJ1O43426 1573 aa32.5■■■□□ 2.79
PTK2-216ENST00000519881 BIVM-ERCC5R4GMW8 1640 aa32.49■■■□□ 2.79
PTK2-216ENST00000519881 CYB5RLQ6IPT4 315 aa32.48■■■□□ 2.79
PTK2-216ENST00000519881 CLASP1Q7Z460 1538 aa32.46■■■□□ 2.79
PTK2-216ENST00000519881 PBRM1Q86U86 1689 aa32.45■■■□□ 2.79
PTK2-216ENST00000519881 ARAP1Q96P48 1450 aa32.42■■■□□ 2.78
PTK2-216ENST00000519881 GRIN2AQ12879 1464 aa32.24■■■□□ 2.75
PTK2-216ENST00000519881 ADAMTS12P58397 1594 aa32.23■■■□□ 2.75
PTK2-216ENST00000519881 FHAD1B1AJZ9 1412 aa32.2■■■□□ 2.75
PTK2-216ENST00000519881 ERICH3Q5RHP9 1530 aa32.19■■■□□ 2.74
PTK2-216ENST00000519881 NUP160Q12769 1436 aa32.16■■■□□ 2.74
PTK2-216ENST00000519881 CEP170Q5SW79 1584 aa32.11■■■□□ 2.73
PTK2-216ENST00000519881 ERCC6L2Q5T890 1561 aa32.01■■■□□ 2.71
PTK2-216ENST00000519881 TRHP20396 242 aaPredicted RBP31.96■■■□□ 2.71
PTK2-216ENST00000519881 IGF1RP08069 1367 aa31.95■■■□□ 2.71
PTK2-216ENST00000519881 SHROOM2Q13796 1616 aa31.93■■■□□ 2.7
PTK2-216ENST00000519881 KIF27Q86VH2 1401 aa31.91■■■□□ 2.7
PTK2-216ENST00000519881 JPH4Q96JJ6 628 aa31.86■■■□□ 2.69
PTK2-216ENST00000519881 PRG4Q92954 1404 aaPredicted RBP31.8■■■□□ 2.68
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms