RNA–Protein interactions for RNA: ENST00000558467.1

GCHFR-202, Transcript of GTP cyclohydrolase I feedback regulator, humanhuman

TSL 2 BASIC

Gene GCHFR, Length 785 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCHFR-202ENST00000558467 NISCHQ9Y2I1 1504 aa45.62■■■■■ 4.89
GCHFR-202ENST00000558467 CCDC180Q9P1Z9 1646 aa40.63■■■■■ 4.09
GCHFR-202ENST00000558467 ABCC9O60706 1549 aa39.99■■■■□ 3.99
GCHFR-202ENST00000558467 RB1CC1Q8TDY2 1594 aa38.35■■■■□ 3.73
GCHFR-202ENST00000558467 DCAF8L2P0C7V8 631 aa38.33■■■■□ 3.73
GCHFR-202ENST00000558467 NACADO15069 1562 aa38.23■■■■□ 3.71
GCHFR-202ENST00000558467 ZCCHC6Q5VYS8 1495 aaKnown RBP37.97■■■■□ 3.67
GCHFR-202ENST00000558467 MYO15BQ96JP2 1530 aa37.87■■■■□ 3.65
GCHFR-202ENST00000558467 DCAF1Q9Y4B6 1507 aa37.67■■■■□ 3.62
GCHFR-202ENST00000558467 UNC13AQ9UPW8 1703 aa37.5■■■■□ 3.59
GCHFR-202ENST00000558467 PABPN1Q86U42 306 aaKnown RBP eCLIP37.35■■■■□ 3.57
GCHFR-202ENST00000558467 SCRIBQ14160 1630 aa37.16■■■■□ 3.54
GCHFR-202ENST00000558467 BICRAQ9NZM4 1560 aa37.16■■■■□ 3.54
GCHFR-202ENST00000558467 DNAJC5BQ9UF47 199 aa36.78■■■■□ 3.48
GCHFR-202ENST00000558467 SHROOM4Q9ULL8 1493 aa36.69■■■■□ 3.46
GCHFR-202ENST00000558467 EIF4G1Q04637 1599 aaKnown RBP36.22■■■■□ 3.39
GCHFR-202ENST00000558467 CC2D2AQ9P2K1 1620 aa36.13■■■■□ 3.37
GCHFR-202ENST00000558467 CECR2Q9BXF3 1484 aa35.91■■■■□ 3.34
GCHFR-202ENST00000558467 SMARCA4P51532 1647 aa35.46■■■■□ 3.27
GCHFR-202ENST00000558467 BAZ1AQ9NRL2 1556 aaPredicted RBP35.38■■■■□ 3.25
GCHFR-202ENST00000558467 ATAD2BQ9ULI0 1458 aa35.29■■■■□ 3.24
GCHFR-202ENST00000558467 NCAPD3P42695 1498 aa35.24■■■■□ 3.23
GCHFR-202ENST00000558467 SMARCA2P51531 1590 aa35.24■■■■□ 3.23
GCHFR-202ENST00000558467 MROH2BQ7Z745 1585 aa35.19■■■■□ 3.22
GCHFR-202ENST00000558467 HMGXB3Q12766 1538 aa35.09■■■■□ 3.21
GCHFR-202ENST00000558467 PEG3Q9GZU2 1588 aa35.04■■■■□ 3.2
GCHFR-202ENST00000558467 BAZ1BQ9UIG0 1483 aaKnown RBP35.03■■■■□ 3.2
GCHFR-202ENST00000558467 WIZO95785 1651 aa34.84■■■■□ 3.17
GCHFR-202ENST00000558467 RSF1Q96T23 1441 aaPredicted RBP34.71■■■■□ 3.15
GCHFR-202ENST00000558467 NESP48681 1621 aa34.55■■■■□ 3.12
GCHFR-202ENST00000558467 ERCC6Q03468 1493 aa34.5■■■■□ 3.11
GCHFR-202ENST00000558467 TOP2AP11388 1531 aaKnown RBP34.42■■■■□ 3.1
GCHFR-202ENST00000558467 LAMC3Q9Y6N6 1575 aa34.39■■■■□ 3.1
GCHFR-202ENST00000558467 CADPSQ9ULU8 1353 aa34.24■■■■□ 3.07
GCHFR-202ENST00000558467 PDS5BQ9NTI5 1447 aa34.17■■■■□ 3.06
GCHFR-202ENST00000558467 KIF21AQ7Z4S6 1674 aa34.15■■■■□ 3.06
GCHFR-202ENST00000558467 CUX2O14529 1486 aa34.09■■■■□ 3.05
GCHFR-202ENST00000558467 THOC2Q8NI27 1593 aaKnown RBP34.02■■■■□ 3.04
GCHFR-202ENST00000558467 CCDC88BA6NC98 1476 aa34.02■■■■□ 3.04
GCHFR-202ENST00000558467 CFTRP13569 1480 aa34■■■■□ 3.03
GCHFR-202ENST00000558467 FANCD2Q9BXW9 1451 aa33.89■■■■□ 3.02
GCHFR-202ENST00000558467 CEP164Q9UPV0 1460 aa33.88■■■■□ 3.01
GCHFR-202ENST00000558467 SUPT5HO00267 1087 aaKnown RBP33.85■■■■□ 3.01
GCHFR-202ENST00000558467 MRC2Q9UBG0 1479 aa33.84■■■■□ 3.01
GCHFR-202ENST00000558467 PRDM2Q13029 1718 aa33.8■■■■□ 3
GCHFR-202ENST00000558467 WDR62O43379 1518 aa33.7■■■□□ 2.99
GCHFR-202ENST00000558467 URB2Q14146 1524 aaKnown RBP33.56■■■□□ 2.96
GCHFR-202ENST00000558467 TOPBP1Q92547 1522 aa33.33■■■□□ 2.93
GCHFR-202ENST00000558467 DNMBPQ6XZF7 1577 aa33.28■■■□□ 2.92
GCHFR-202ENST00000558467 ABCC8Q09428 1581 aa33.27■■■□□ 2.92
GCHFR-202ENST00000558467 DNAJC5Q9H3Z4 198 aa33.21■■■□□ 2.91
GCHFR-202ENST00000558467 IFT140Q96RY7 1462 aa33.14■■■□□ 2.9
GCHFR-202ENST00000558467 CUX1P39880 1505 aa33.03■■■□□ 2.88
GCHFR-202ENST00000558467 ZNF608Q9ULD9 1512 aaPredicted RBP33.03■■■□□ 2.88
GCHFR-202ENST00000558467 POLA1P09884 1462 aaPredicted RBP33.03■■■□□ 2.88
GCHFR-202ENST00000558467 TARBP1Q13395 1621 aaKnown RBP32.95■■■□□ 2.87
GCHFR-202ENST00000558467 FGD5Q6ZNL6 1462 aa32.95■■■□□ 2.87
GCHFR-202ENST00000558467 RAD54L2Q9Y4B4 1467 aa32.93■■■□□ 2.86
GCHFR-202ENST00000558467 SOGA1O94964 1423 aa32.91■■■□□ 2.86
GCHFR-202ENST00000558467 EIF4G3O43432 1585 aaKnown RBP32.91■■■□□ 2.86
GCHFR-202ENST00000558467 AQRO60306 1485 aaKnown RBP eCLIP32.84■■■□□ 2.85
GCHFR-202ENST00000558467 WRNQ14191 1432 aaPredicted RBP eCLIP32.76■■■□□ 2.83
GCHFR-202ENST00000558467 TDRD9Q8NDG6 1382 aaKnown RBP32.75■■■□□ 2.83
GCHFR-202ENST00000558467 SYNJ1O43426 1573 aa32.7■■■□□ 2.83
GCHFR-202ENST00000558467 TOP2BQ02880 1626 aa32.69■■■□□ 2.82
GCHFR-202ENST00000558467 BIVM-ERCC5R4GMW8 1640 aa32.69■■■□□ 2.82
GCHFR-202ENST00000558467 OSCARQ8IYS5 282 aa32.68■■■□□ 2.82
GCHFR-202ENST00000558467 WDR97A6NE52 1622 aa32.67■■■□□ 2.82
GCHFR-202ENST00000558467 ABCA10Q8WWZ4 1543 aa32.58■■■□□ 2.81
GCHFR-202ENST00000558467 CHD1O14646 1710 aa32.55■■■□□ 2.8
GCHFR-202ENST00000558467 FBLN2P98095 1184 aa32.55■■■□□ 2.8
GCHFR-202ENST00000558467 SNAPC4Q5SXM2 1469 aa32.54■■■□□ 2.8
GCHFR-202ENST00000558467 GRIN2BQ13224 1484 aa32.53■■■□□ 2.8
GCHFR-202ENST00000558467 GAPVD1Q14C86 1478 aa32.52■■■□□ 2.8
GCHFR-202ENST00000558467 PBRM1Q86U86 1689 aa32.5■■■□□ 2.79
GCHFR-202ENST00000558467 ABCA5Q8WWZ7 1642 aa32.48■■■□□ 2.79
GCHFR-202ENST00000558467 MAGI1Q96QZ7 1491 aaPredicted RBP32.44■■■□□ 2.78
GCHFR-202ENST00000558467 CHMP7Q8WUX9 453 aaPredicted RBP32.38■■■□□ 2.77
GCHFR-202ENST00000558467 SYNJ2O15056 1496 aa32.33■■■□□ 2.77
GCHFR-202ENST00000558467 TRIM41Q8WV44 630 aa32.21■■■□□ 2.75
GCHFR-202ENST00000558467 RIMBP3CA6NJZ7 1639 aa32.21■■■□□ 2.75
GCHFR-202ENST00000558467 RIMBP3BA6NNM3 1639 aa32.21■■■□□ 2.75
GCHFR-202ENST00000558467 RIMBP3Q9UFD9 1639 aa32.21■■■□□ 2.75
GCHFR-202ENST00000558467 ADAMTS12P58397 1594 aa32.2■■■□□ 2.75
GCHFR-202ENST00000558467 ERICH3Q5RHP9 1530 aa32.2■■■□□ 2.74
GCHFR-202ENST00000558467 ARHGEF11O15085 1522 aa32.16■■■□□ 2.74
GCHFR-202ENST00000558467 CLASP1Q7Z460 1538 aa32.13■■■□□ 2.73
GCHFR-202ENST00000558467 FHAD1B1AJZ9 1412 aa32.12■■■□□ 2.73
GCHFR-202ENST00000558467 GRIN2AQ12879 1464 aa32.11■■■□□ 2.73
GCHFR-202ENST00000558467 KIF27Q86VH2 1401 aa32.08■■■□□ 2.73
GCHFR-202ENST00000558467 CEP170Q5SW79 1584 aa31.98■■■□□ 2.71
GCHFR-202ENST00000558467 IGF1RP08069 1367 aa31.94■■■□□ 2.7
GCHFR-202ENST00000558467 NUP160Q12769 1436 aa31.94■■■□□ 2.7
GCHFR-202ENST00000558467 CYB5RLQ6IPT4 315 aa31.91■■■□□ 2.7
GCHFR-202ENST00000558467 ARAP1Q96P48 1450 aa31.91■■■□□ 2.7
GCHFR-202ENST00000558467 CUL7Q14999 1698 aa31.9■■■□□ 2.7
GCHFR-202ENST00000558467 CARMIL1Q5VZK9 1371 aa31.79■■■□□ 2.68
GCHFR-202ENST00000558467 RUSC2Q8N2Y8 1516 aa31.78■■■□□ 2.68
GCHFR-202ENST00000558467 ERCC6L2Q5T890 1561 aa31.73■■■□□ 2.67
GCHFR-202ENST00000558467 SHROOM2Q13796 1616 aa31.72■■■□□ 2.67
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms