Protein–RNA interactions for Protein: P07988

SFTPB, Pulmonary surfactant-associated protein B, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFTPBP07988 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC17.02■□□□□ 0.32
SFTPBP07988 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
SFTPBP07988 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC17.02■□□□□ 0.32
SFTPBP07988 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC17.02■□□□□ 0.32
SFTPBP07988 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC17.02■□□□□ 0.31
SFTPBP07988 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.31
SFTPBP07988 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SFTPBP07988 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SFTPBP07988 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC17.01■□□□□ 0.31
SFTPBP07988 AC116562.4-201ENST00000641316 2276 ntBASIC17.01■□□□□ 0.31
SFTPBP07988 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
SFTPBP07988 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
SFTPBP07988 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC17.01■□□□□ 0.31
SFTPBP07988 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SFTPBP07988 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SFTPBP07988 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SFTPBP07988 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC17.01■□□□□ 0.31
SFTPBP07988 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC17.01■□□□□ 0.31
SFTPBP07988 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SFTPBP07988 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SFTPBP07988 PTBP1P-201ENST00000554374 1601 ntBASIC17.01■□□□□ 0.31
SFTPBP07988 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
SFTPBP07988 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
SFTPBP07988 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC17.01■□□□□ 0.31
SFTPBP07988 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
SFTPBP07988 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC17.01■□□□□ 0.31
SFTPBP07988 AC100791.3-201ENST00000617619 330 ntBASIC17.01■□□□□ 0.31
SFTPBP07988 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC17.01■□□□□ 0.31
SFTPBP07988 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC17.01■□□□□ 0.31
SFTPBP07988 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SFTPBP07988 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
SFTPBP07988 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SFTPBP07988 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
SFTPBP07988 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SFTPBP07988 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
SFTPBP07988 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC17.01■□□□□ 0.31
SFTPBP07988 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
SFTPBP07988 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SFTPBP07988 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
SFTPBP07988 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
SFTPBP07988 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SFTPBP07988 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SFTPBP07988 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC17■□□□□ 0.31
SFTPBP07988 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC17■□□□□ 0.31
SFTPBP07988 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SFTPBP07988 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC17■□□□□ 0.31
SFTPBP07988 TMEM179-206ENST00000616017 1645 ntBASIC17■□□□□ 0.31
SFTPBP07988 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC17■□□□□ 0.31
SFTPBP07988 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
SFTPBP07988 MIPEPP3-201ENST00000412105 444 ntBASIC17■□□□□ 0.31
SFTPBP07988 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC17■□□□□ 0.31
SFTPBP07988 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC17■□□□□ 0.31
SFTPBP07988 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC17■□□□□ 0.31
SFTPBP07988 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC17■□□□□ 0.31
SFTPBP07988 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC17■□□□□ 0.31
SFTPBP07988 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC17■□□□□ 0.31
SFTPBP07988 MARS-234ENST00000630571 216 ntTSL 5 BASIC17■□□□□ 0.31
SFTPBP07988 MARS-235ENST00000630803 183 ntTSL 3 BASIC17■□□□□ 0.31
SFTPBP07988 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
SFTPBP07988 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SFTPBP07988 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
SFTPBP07988 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
SFTPBP07988 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC17■□□□□ 0.31
SFTPBP07988 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
SFTPBP07988 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
SFTPBP07988 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
SFTPBP07988 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SFTPBP07988 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
SFTPBP07988 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC16.99■□□□□ 0.31
SFTPBP07988 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
SFTPBP07988 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC16.99■□□□□ 0.31
SFTPBP07988 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SFTPBP07988 MOK-225ENST00000522867 1883 ntTSL 5 BASIC16.99■□□□□ 0.31
SFTPBP07988 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SFTPBP07988 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
SFTPBP07988 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
SFTPBP07988 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC16.99■□□□□ 0.31
SFTPBP07988 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC16.99■□□□□ 0.31
SFTPBP07988 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC16.99■□□□□ 0.31
SFTPBP07988 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
SFTPBP07988 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC16.99■□□□□ 0.31
SFTPBP07988 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
SFTPBP07988 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC16.99■□□□□ 0.31
SFTPBP07988 AC098818.2-201ENST00000564925 2320 ntBASIC16.99■□□□□ 0.31
SFTPBP07988 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SFTPBP07988 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
SFTPBP07988 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC16.99■□□□□ 0.31
SFTPBP07988 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
SFTPBP07988 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
SFTPBP07988 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC16.99■□□□□ 0.31
SFTPBP07988 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC16.99■□□□□ 0.31
SFTPBP07988 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
SFTPBP07988 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SFTPBP07988 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SFTPBP07988 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
SFTPBP07988 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SFTPBP07988 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
SFTPBP07988 AL512625.2-201ENST00000417533 625 ntBASIC16.98■□□□□ 0.31
SFTPBP07988 BX276092.2-201ENST00000417668 665 ntBASIC16.98■□□□□ 0.31
SFTPBP07988 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC16.98■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 89.1 ms