Protein–RNA interactions for Protein: S4R434

TMEM56-RWDD3, TMEM56-RWDD3 readthrough, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM56-RWDD3S4R434 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC16.15■□□□□ 0.18
TMEM56-RWDD3S4R434 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC16.15■□□□□ 0.18
TMEM56-RWDD3S4R434 AL031963.3-201ENST00000606441 850 ntBASIC16.15■□□□□ 0.18
TMEM56-RWDD3S4R434 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC16.15■□□□□ 0.18
TMEM56-RWDD3S4R434 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
TMEM56-RWDD3S4R434 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TMEM56-RWDD3S4R434 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TMEM56-RWDD3S4R434 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
TMEM56-RWDD3S4R434 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC16.15■□□□□ 0.18
TMEM56-RWDD3S4R434 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TMEM56-RWDD3S4R434 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
TMEM56-RWDD3S4R434 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC16.15■□□□□ 0.18
TMEM56-RWDD3S4R434 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC16.14■□□□□ 0.18
TMEM56-RWDD3S4R434 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TMEM56-RWDD3S4R434 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TMEM56-RWDD3S4R434 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TMEM56-RWDD3S4R434 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
TMEM56-RWDD3S4R434 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC16.14■□□□□ 0.17
TMEM56-RWDD3S4R434 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
TMEM56-RWDD3S4R434 CROCCP3-202ENST00000420820 1947 ntBASIC16.14■□□□□ 0.17
TMEM56-RWDD3S4R434 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
TMEM56-RWDD3S4R434 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
TMEM56-RWDD3S4R434 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC16.14■□□□□ 0.17
TMEM56-RWDD3S4R434 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TMEM56-RWDD3S4R434 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TMEM56-RWDD3S4R434 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TMEM56-RWDD3S4R434 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC16.14■□□□□ 0.17
TMEM56-RWDD3S4R434 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TMEM56-RWDD3S4R434 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC16.14■□□□□ 0.17
TMEM56-RWDD3S4R434 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC16.14■□□□□ 0.17
TMEM56-RWDD3S4R434 CASP6-205ENST00000505486 538 ntTSL 4 BASIC16.14■□□□□ 0.17
TMEM56-RWDD3S4R434 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
TMEM56-RWDD3S4R434 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC16.14■□□□□ 0.17
TMEM56-RWDD3S4R434 AC131212.1-201ENST00000613771 668 ntBASIC16.14■□□□□ 0.17
TMEM56-RWDD3S4R434 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
TMEM56-RWDD3S4R434 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC16.14■□□□□ 0.17
TMEM56-RWDD3S4R434 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC16.14■□□□□ 0.17
TMEM56-RWDD3S4R434 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC16.14■□□□□ 0.17
TMEM56-RWDD3S4R434 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
TMEM56-RWDD3S4R434 EML3-217ENST00000531557 2509 ntTSL 5 BASIC16.14■□□□□ 0.17
TMEM56-RWDD3S4R434 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC16.14■□□□□ 0.17
TMEM56-RWDD3S4R434 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TMEM56-RWDD3S4R434 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TMEM56-RWDD3S4R434 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
TMEM56-RWDD3S4R434 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TMEM56-RWDD3S4R434 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TMEM56-RWDD3S4R434 KRT8P20-201ENST00000423953 1409 ntBASIC16.13■□□□□ 0.17
TMEM56-RWDD3S4R434 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
TMEM56-RWDD3S4R434 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TMEM56-RWDD3S4R434 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
TMEM56-RWDD3S4R434 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
TMEM56-RWDD3S4R434 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
TMEM56-RWDD3S4R434 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TMEM56-RWDD3S4R434 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC16.13■□□□□ 0.17
TMEM56-RWDD3S4R434 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TMEM56-RWDD3S4R434 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC16.13■□□□□ 0.17
TMEM56-RWDD3S4R434 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC16.13■□□□□ 0.17
TMEM56-RWDD3S4R434 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
TMEM56-RWDD3S4R434 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
TMEM56-RWDD3S4R434 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TMEM56-RWDD3S4R434 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
TMEM56-RWDD3S4R434 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TMEM56-RWDD3S4R434 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
TMEM56-RWDD3S4R434 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
TMEM56-RWDD3S4R434 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TMEM56-RWDD3S4R434 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
TMEM56-RWDD3S4R434 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
TMEM56-RWDD3S4R434 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC16.12■□□□□ 0.17
TMEM56-RWDD3S4R434 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
TMEM56-RWDD3S4R434 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TMEM56-RWDD3S4R434 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
TMEM56-RWDD3S4R434 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
TMEM56-RWDD3S4R434 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC16.12■□□□□ 0.17
TMEM56-RWDD3S4R434 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TMEM56-RWDD3S4R434 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
TMEM56-RWDD3S4R434 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
TMEM56-RWDD3S4R434 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
TMEM56-RWDD3S4R434 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC16.12■□□□□ 0.17
TMEM56-RWDD3S4R434 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC16.12■□□□□ 0.17
TMEM56-RWDD3S4R434 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TMEM56-RWDD3S4R434 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
TMEM56-RWDD3S4R434 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
TMEM56-RWDD3S4R434 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
TMEM56-RWDD3S4R434 ADK-206ENST00000541550 2222 ntTSL 2 BASIC16.11■□□□□ 0.17
TMEM56-RWDD3S4R434 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
TMEM56-RWDD3S4R434 AC120498.9-201ENST00000339021 3867 ntBASIC16.11■□□□□ 0.17
TMEM56-RWDD3S4R434 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TMEM56-RWDD3S4R434 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
TMEM56-RWDD3S4R434 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC16.11■□□□□ 0.17
TMEM56-RWDD3S4R434 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
TMEM56-RWDD3S4R434 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
TMEM56-RWDD3S4R434 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
TMEM56-RWDD3S4R434 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TMEM56-RWDD3S4R434 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TMEM56-RWDD3S4R434 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
TMEM56-RWDD3S4R434 COX20-201ENST00000366528 568 ntTSL 2 BASIC16.11■□□□□ 0.17
TMEM56-RWDD3S4R434 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
TMEM56-RWDD3S4R434 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC16.11■□□□□ 0.17
TMEM56-RWDD3S4R434 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
TMEM56-RWDD3S4R434 TERF1P2-201ENST00000583350 1212 ntBASIC16.11■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 56.4 ms