RNA–Protein interactions for RNA: ENST00000420820.6

CROCCP3-202, Transcript of ciliary rootlet coiled-coil, rootletin pseudogene 3, humanhuman

BASIC

Gene CROCCP3, Length 1,947 nt, Biotype transcribed unprocessed pseudogene.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3-202ENST00000420820 NISCHQ9Y2I1 1504 aa40.99■■■■■ 4.15
CROCCP3-202ENST00000420820 CCDC180Q9P1Z9 1646 aa35.29■■■■□ 3.24
CROCCP3-202ENST00000420820 ZCCHC6Q5VYS8 1495 aaKnown RBP34.62■■■■□ 3.13
CROCCP3-202ENST00000420820 SHROOM4Q9ULL8 1493 aa34.06■■■■□ 3.04
CROCCP3-202ENST00000420820 DCAF1Q9Y4B6 1507 aa33.87■■■■□ 3.01
CROCCP3-202ENST00000420820 DCAF8L2P0C7V8 631 aa33.5■■■□□ 2.95
CROCCP3-202ENST00000420820 SUPT5HO00267 1087 aaKnown RBP33.17■■■□□ 2.9
CROCCP3-202ENST00000420820 MYO15BQ96JP2 1530 aa33.13■■■□□ 2.89
CROCCP3-202ENST00000420820 ABCC9O60706 1549 aa32.86■■■□□ 2.85
CROCCP3-202ENST00000420820 NACADO15069 1562 aa32.65■■■□□ 2.82
CROCCP3-202ENST00000420820 SCRIBQ14160 1630 aa32.62■■■□□ 2.81
CROCCP3-202ENST00000420820 CHIC1Q5VXU3 224 aa32.27■■■□□ 2.76
CROCCP3-202ENST00000420820 RSF1Q96T23 1441 aaPredicted RBP32.16■■■□□ 2.74
CROCCP3-202ENST00000420820 RB1CC1Q8TDY2 1594 aa32.15■■■□□ 2.74
CROCCP3-202ENST00000420820 CECR2Q9BXF3 1484 aa31.83■■■□□ 2.69
CROCCP3-202ENST00000420820 MROH2BQ7Z745 1585 aa31.74■■■□□ 2.67
CROCCP3-202ENST00000420820 UNC13AQ9UPW8 1703 aa31.69■■■□□ 2.66
CROCCP3-202ENST00000420820 BAZ1AQ9NRL2 1556 aaPredicted RBP31.54■■■□□ 2.64
CROCCP3-202ENST00000420820 WIZO95785 1651 aa31.54■■■□□ 2.64
CROCCP3-202ENST00000420820 SMARCA4P51532 1647 aa31.33■■■□□ 2.61
CROCCP3-202ENST00000420820 BICRAQ9NZM4 1560 aa31.29■■■□□ 2.6
CROCCP3-202ENST00000420820 TOP2AP11388 1531 aaKnown RBP31.17■■■□□ 2.58
CROCCP3-202ENST00000420820 EIF4G1Q04637 1599 aaKnown RBP31.1■■■□□ 2.57
CROCCP3-202ENST00000420820 TRIM41Q8WV44 630 aa31.1■■■□□ 2.57
CROCCP3-202ENST00000420820 LOC105371045A0A1W2PR82 267 aa31.09■■■□□ 2.57
CROCCP3-202ENST00000420820 PABPN1Q86U42 306 aaKnown RBP eCLIP31.08■■■□□ 2.57
CROCCP3-202ENST00000420820 SMARCA2P51531 1590 aa30.94■■■□□ 2.54
CROCCP3-202ENST00000420820 PEG3Q9GZU2 1588 aa30.92■■■□□ 2.54
CROCCP3-202ENST00000420820 CCDC88BA6NC98 1476 aa30.91■■■□□ 2.54
CROCCP3-202ENST00000420820 ATAD2BQ9ULI0 1458 aa30.59■■■□□ 2.49
CROCCP3-202ENST00000420820 FAM9AQ8IZU1 332 aaPredicted RBP30.58■■■□□ 2.49
CROCCP3-202ENST00000420820 ABCC8Q09428 1581 aa30.55■■■□□ 2.48
CROCCP3-202ENST00000420820 PCGF6Q9BYE7 350 aa30.54■■■□□ 2.48
CROCCP3-202ENST00000420820 BAZ1BQ9UIG0 1483 aaKnown RBP30.42■■■□□ 2.46
CROCCP3-202ENST00000420820 HRCP23327 699 aa30.39■■■□□ 2.46
CROCCP3-202ENST00000420820 TRIM26Q12899 539 aaPredicted RBP30.3■■■□□ 2.44
CROCCP3-202ENST00000420820 WRNQ14191 1432 aaPredicted RBP eCLIP30.19■■■□□ 2.42
CROCCP3-202ENST00000420820 HMGXB3Q12766 1538 aa30.19■■■□□ 2.42
CROCCP3-202ENST00000420820 EEA1Q15075 1411 aa30.18■■■□□ 2.42
CROCCP3-202ENST00000420820 NCAPD3P42695 1498 aa30.17■■■□□ 2.42
CROCCP3-202ENST00000420820 SOGA1O94964 1423 aa30.16■■■□□ 2.42
CROCCP3-202ENST00000420820 EHMT2Q96KQ7 1210 aa30.12■■■□□ 2.41
CROCCP3-202ENST00000420820 SYNJ1O43426 1573 aa30.1■■■□□ 2.41
CROCCP3-202ENST00000420820 RUSC2Q8N2Y8 1516 aa30.03■■■□□ 2.4
CROCCP3-202ENST00000420820 CSRNP3Q8WYN3 585 aa29.97■■■□□ 2.39
CROCCP3-202ENST00000420820 TNIKQ9UKE5 1360 aa29.93■■■□□ 2.38
CROCCP3-202ENST00000420820 TOP2BQ02880 1626 aa29.87■■■□□ 2.37
CROCCP3-202ENST00000420820 CEP162Q5TB80 1403 aa29.84■■■□□ 2.37
CROCCP3-202ENST00000420820 BIVM-ERCC5R4GMW8 1640 aa29.83■■■□□ 2.37
CROCCP3-202ENST00000420820 GOLGA3Q08378 1498 aa29.83■■■□□ 2.37
CROCCP3-202ENST00000420820 KIF21BO75037 1637 aa29.8■■■□□ 2.36
CROCCP3-202ENST00000420820 CFTRP13569 1480 aa29.75■■■□□ 2.35
CROCCP3-202ENST00000420820 CC2D2AQ9P2K1 1620 aa29.74■■■□□ 2.35
CROCCP3-202ENST00000420820 CEP164Q9UPV0 1460 aa29.73■■■□□ 2.35
CROCCP3-202ENST00000420820 PRDM2Q13029 1718 aa29.66■■■□□ 2.34
CROCCP3-202ENST00000420820 UBTFP17480 764 aaKnown RBP29.62■■■□□ 2.33
CROCCP3-202ENST00000420820 CUX1P39880 1505 aa29.61■■■□□ 2.33
CROCCP3-202ENST00000420820 PPARGC1BQ86YN6 1023 aaKnown RBP29.6■■■□□ 2.33
CROCCP3-202ENST00000420820 DNAJC5BQ9UF47 199 aa29.51■■■□□ 2.31
CROCCP3-202ENST00000420820 RAPGEF2Q9Y4G8 1499 aa29.5■■■□□ 2.31
CROCCP3-202ENST00000420820 ZEB1P37275 1124 aaPredicted RBP29.49■■■□□ 2.31
CROCCP3-202ENST00000420820 CADPSQ9ULU8 1353 aa29.44■■■□□ 2.3
CROCCP3-202ENST00000420820 ERICH3Q5RHP9 1530 aa29.43■■■□□ 2.3
CROCCP3-202ENST00000420820 PRXQ9BXM0 1461 aa29.42■■■□□ 2.3
CROCCP3-202ENST00000420820 CLIP1P30622 1438 aa29.39■■■□□ 2.3
CROCCP3-202ENST00000420820 KIF27Q86VH2 1401 aa29.32■■■□□ 2.28
CROCCP3-202ENST00000420820 VPS8Q8N3P4 1428 aa29.27■■■□□ 2.28
CROCCP3-202ENST00000420820 FANCD2Q9BXW9 1451 aa29.12■■■□□ 2.25
CROCCP3-202ENST00000420820 FGD5Q6ZNL6 1462 aa29.11■■■□□ 2.25
CROCCP3-202ENST00000420820 CUX2O14529 1486 aa29.07■■■□□ 2.24
CROCCP3-202ENST00000420820 TTBK1Q5TCY1 1321 aaPredicted RBP29.07■■■□□ 2.24
CROCCP3-202ENST00000420820 ARAP1Q96P48 1450 aa29.05■■■□□ 2.24
CROCCP3-202ENST00000420820 IGF1RP08069 1367 aa29.04■■■□□ 2.24
CROCCP3-202ENST00000420820 DNMBPQ6XZF7 1577 aa29.02■■■□□ 2.24
CROCCP3-202ENST00000420820 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.99■■■□□ 2.23
CROCCP3-202ENST00000420820 LAMC3Q9Y6N6 1575 aa28.97■■■□□ 2.23
CROCCP3-202ENST00000420820 NESP48681 1621 aa28.96■■■□□ 2.23
CROCCP3-202ENST00000420820 TOPBP1Q92547 1522 aa28.93■■■□□ 2.22
CROCCP3-202ENST00000420820 CCER1Q8TC90 406 aaPredicted RBP28.92■■■□□ 2.22
CROCCP3-202ENST00000420820 RANGAP1P46060 587 aaPredicted RBP28.9■■■□□ 2.22
CROCCP3-202ENST00000420820 APLP2Q06481 763 aa28.88■■■□□ 2.21
CROCCP3-202ENST00000420820 ABCA10Q8WWZ4 1543 aa28.88■■■□□ 2.21
CROCCP3-202ENST00000420820 ARHGAP35Q9NRY4 1499 aa28.88■■■□□ 2.21
CROCCP3-202ENST00000420820 CARMIL1Q5VZK9 1371 aa28.87■■■□□ 2.21
CROCCP3-202ENST00000420820 POLA1P09884 1462 aaPredicted RBP28.86■■■□□ 2.21
CROCCP3-202ENST00000420820 RAD54L2Q9Y4B4 1467 aa28.79■■■□□ 2.2
CROCCP3-202ENST00000420820 URB2Q14146 1524 aaKnown RBP28.76■■■□□ 2.19
CROCCP3-202ENST00000420820 WDR97A6NE52 1622 aa28.75■■■□□ 2.19
CROCCP3-202ENST00000420820 CUL7Q14999 1698 aa28.69■■■□□ 2.18
CROCCP3-202ENST00000420820 PDS5BQ9NTI5 1447 aa28.69■■■□□ 2.18
CROCCP3-202ENST00000420820 KANK4Q5T7N3 995 aaPredicted RBP28.64■■■□□ 2.18
CROCCP3-202ENST00000420820 MAP3K1Q13233 1512 aa28.62■■■□□ 2.17
CROCCP3-202ENST00000420820 KIF21AQ7Z4S6 1674 aa28.62■■■□□ 2.17
CROCCP3-202ENST00000420820 HNRNPUL2Q1KMD3 747 aaKnown RBP28.6■■■□□ 2.17
CROCCP3-202ENST00000420820 ABCA5Q8WWZ7 1642 aa28.59■■■□□ 2.17
CROCCP3-202ENST00000420820 RRBP1Q9P2E9 1410 aaKnown RBP28.57■■■□□ 2.16
CROCCP3-202ENST00000420820 CTTNBP2Q8WZ74 1663 aa28.53■■■□□ 2.16
CROCCP3-202ENST00000420820 TIAM1Q13009 1591 aa28.52■■■□□ 2.16
CROCCP3-202ENST00000420820 EFCAB5A4FU69 1503 aa28.49■■■□□ 2.15
CROCCP3-202ENST00000420820 FHAD1B1AJZ9 1412 aa28.47■■■□□ 2.15
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms