Protein–RNA interactions for Protein: Q9UMX0

UBQLN1, Ubiquilin-1, humanhuman

Known RBP Predictions only

Length 589 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN1Q9UMX0 DUX4L11-201ENST00000611504 1267 ntBASIC28.06■■■□□ 2.08
UBQLN1Q9UMX0 DUX4L12-201ENST00000614593 1267 ntBASIC28.06■■■□□ 2.08
UBQLN1Q9UMX0 DUX4L14-201ENST00000621227 1267 ntBASIC28.06■■■□□ 2.08
UBQLN1Q9UMX0 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC28.04■■■□□ 2.08
UBQLN1Q9UMX0 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC28.04■■■□□ 2.08
UBQLN1Q9UMX0 RNF166-209ENST00000567844 633 ntTSL 5 BASIC28.04■■■□□ 2.08
UBQLN1Q9UMX0 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC28.04■■■□□ 2.08
UBQLN1Q9UMX0 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC28.03■■■□□ 2.08
UBQLN1Q9UMX0 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC28.03■■■□□ 2.08
UBQLN1Q9UMX0 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC28.03■■■□□ 2.08
UBQLN1Q9UMX0 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC28.03■■■□□ 2.08
UBQLN1Q9UMX0 MACF1-219ENST00000484793 834 ntTSL 2 BASIC28.02■■■□□ 2.08
UBQLN1Q9UMX0 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC28.02■■■□□ 2.08
UBQLN1Q9UMX0 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC28.01■■■□□ 2.07
UBQLN1Q9UMX0 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC28.01■■■□□ 2.07
UBQLN1Q9UMX0 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC28.01■■■□□ 2.07
UBQLN1Q9UMX0 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC28.01■■■□□ 2.07
UBQLN1Q9UMX0 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC28.01■■■□□ 2.07
UBQLN1Q9UMX0 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC28■■■□□ 2.07
UBQLN1Q9UMX0 ST7-202ENST00000323984 2142 ntTSL 5 BASIC27.99■■■□□ 2.07
UBQLN1Q9UMX0 ST7-207ENST00000393449 2127 ntTSL 5 BASIC27.99■■■□□ 2.07
UBQLN1Q9UMX0 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC27.99■■■□□ 2.07
UBQLN1Q9UMX0 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC27.99■■■□□ 2.07
UBQLN1Q9UMX0 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC27.99■■■□□ 2.07
UBQLN1Q9UMX0 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC27.99■■■□□ 2.07
UBQLN1Q9UMX0 AGPS-202ENST00000409888 815 ntTSL 4 BASIC27.98■■■□□ 2.07
UBQLN1Q9UMX0 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC27.98■■■□□ 2.07
UBQLN1Q9UMX0 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC27.97■■■□□ 2.07
UBQLN1Q9UMX0 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC27.97■■■□□ 2.07
UBQLN1Q9UMX0 HLA-V-202ENST00000446817 847 ntBASIC27.97■■■□□ 2.07
UBQLN1Q9UMX0 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC27.97■■■□□ 2.07
UBQLN1Q9UMX0 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC27.97■■■□□ 2.07
UBQLN1Q9UMX0 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC27.97■■■□□ 2.07
UBQLN1Q9UMX0 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC27.96■■■□□ 2.07
UBQLN1Q9UMX0 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC27.96■■■□□ 2.07
UBQLN1Q9UMX0 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC27.96■■■□□ 2.07
UBQLN1Q9UMX0 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC27.96■■■□□ 2.07
UBQLN1Q9UMX0 MBP-237ENST00000579129 1052 ntTSL 5 BASIC27.95■■■□□ 2.06
UBQLN1Q9UMX0 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC27.94■■■□□ 2.06
UBQLN1Q9UMX0 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC27.94■■■□□ 2.06
UBQLN1Q9UMX0 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC27.94■■■□□ 2.06
UBQLN1Q9UMX0 MIR3648-2-201ENST00000581792 180 ntBASIC27.94■■■□□ 2.06
UBQLN1Q9UMX0 MIR3648-1-201ENST00000615959 180 ntBASIC27.94■■■□□ 2.06
UBQLN1Q9UMX0 DUX4L13-201ENST00000554103 1267 ntBASIC27.93■■■□□ 2.06
UBQLN1Q9UMX0 DUX4L15-201ENST00000611059 1267 ntBASIC27.93■■■□□ 2.06
UBQLN1Q9UMX0 DUX4L23-201ENST00000615195 1269 ntBASIC27.93■■■□□ 2.06
UBQLN1Q9UMX0 DUX4L24-201ENST00000617576 1269 ntBASIC27.93■■■□□ 2.06
UBQLN1Q9UMX0 DUX4L22-201ENST00000618238 1269 ntBASIC27.93■■■□□ 2.06
UBQLN1Q9UMX0 DUX4L20-201ENST00000619712 1269 ntBASIC27.93■■■□□ 2.06
UBQLN1Q9UMX0 DUX4L21-201ENST00000622058 1269 ntBASIC27.93■■■□□ 2.06
UBQLN1Q9UMX0 DUX4L10-201ENST00000622460 1267 ntBASIC27.93■■■□□ 2.06
UBQLN1Q9UMX0 DUX4L25-201ENST00000624915 1269 ntBASIC27.93■■■□□ 2.06
UBQLN1Q9UMX0 GDI1-215ENST00000630693 786 ntTSL 4 BASIC27.93■■■□□ 2.06
UBQLN1Q9UMX0 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC27.92■■■□□ 2.06
UBQLN1Q9UMX0 CR559946.2-201ENST00000623684 991 ntBASIC27.92■■■□□ 2.06
UBQLN1Q9UMX0 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC27.92■■■□□ 2.06
UBQLN1Q9UMX0 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC27.91■■■□□ 2.06
UBQLN1Q9UMX0 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC27.91■■■□□ 2.06
UBQLN1Q9UMX0 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC27.91■■■□□ 2.06
UBQLN1Q9UMX0 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC27.91■■■□□ 2.06
UBQLN1Q9UMX0 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC27.91■■■□□ 2.06
UBQLN1Q9UMX0 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC27.91■■■□□ 2.06
UBQLN1Q9UMX0 AC135983.2-203ENST00000454486 1613 ntBASIC27.9■■■□□ 2.06
UBQLN1Q9UMX0 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC27.9■■■□□ 2.06
UBQLN1Q9UMX0 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC27.9■■■□□ 2.06
UBQLN1Q9UMX0 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC27.9■■■□□ 2.06
UBQLN1Q9UMX0 CHML-204ENST00000638121 920 ntTSL 2 BASIC27.9■■■□□ 2.06
UBQLN1Q9UMX0 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC27.9■■■□□ 2.06
UBQLN1Q9UMX0 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC27.89■■■□□ 2.06
UBQLN1Q9UMX0 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC27.89■■■□□ 2.06
UBQLN1Q9UMX0 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC27.89■■■□□ 2.05
UBQLN1Q9UMX0 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC27.88■■■□□ 2.05
UBQLN1Q9UMX0 AC016575.1-201ENST00000607026 382 ntBASIC27.88■■■□□ 2.05
UBQLN1Q9UMX0 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC27.88■■■□□ 2.05
UBQLN1Q9UMX0 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC27.87■■■□□ 2.05
UBQLN1Q9UMX0 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC27.87■■■□□ 2.05
UBQLN1Q9UMX0 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC27.87■■■□□ 2.05
UBQLN1Q9UMX0 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC27.87■■■□□ 2.05
UBQLN1Q9UMX0 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC27.86■■■□□ 2.05
UBQLN1Q9UMX0 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC27.86■■■□□ 2.05
UBQLN1Q9UMX0 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC27.86■■■□□ 2.05
UBQLN1Q9UMX0 WHAMMP2-203ENST00000563942 1603 ntBASIC27.85■■■□□ 2.05
UBQLN1Q9UMX0 RPS2-202ENST00000526522 924 ntTSL 2 BASIC27.85■■■□□ 2.05
UBQLN1Q9UMX0 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC27.85■■■□□ 2.05
UBQLN1Q9UMX0 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC27.84■■■□□ 2.05
UBQLN1Q9UMX0 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC27.84■■■□□ 2.05
UBQLN1Q9UMX0 MIR639-201ENST00000384974 98 ntBASIC27.84■■■□□ 2.05
UBQLN1Q9UMX0 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC27.84■■■□□ 2.05
UBQLN1Q9UMX0 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC27.84■■■□□ 2.05
UBQLN1Q9UMX0 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC27.83■■■□□ 2.05
UBQLN1Q9UMX0 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC27.83■■■□□ 2.05
UBQLN1Q9UMX0 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC27.82■■■□□ 2.04
UBQLN1Q9UMX0 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC27.82■■■□□ 2.04
UBQLN1Q9UMX0 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC27.82■■■□□ 2.04
UBQLN1Q9UMX0 HES6-205ENST00000409356 528 ntTSL 2 BASIC27.8■■■□□ 2.04
UBQLN1Q9UMX0 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC27.8■■■□□ 2.04
UBQLN1Q9UMX0 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC27.78■■■□□ 2.04
UBQLN1Q9UMX0 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC27.78■■■□□ 2.04
UBQLN1Q9UMX0 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC27.77■■■□□ 2.04
UBQLN1Q9UMX0 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC27.77■■■□□ 2.04
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms