Protein–RNA interactions for Protein: Q9NQC8

IFT46, Intraflagellar transport protein 46 homolog, humanhuman

Predictions only

Length 304 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT46Q9NQC8 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC22.11■■□□□ 1.13
IFT46Q9NQC8 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
IFT46Q9NQC8 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC22.1■■□□□ 1.13
IFT46Q9NQC8 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC22.1■■□□□ 1.13
IFT46Q9NQC8 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC22.1■■□□□ 1.13
IFT46Q9NQC8 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
IFT46Q9NQC8 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC22.08■■□□□ 1.13
IFT46Q9NQC8 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
IFT46Q9NQC8 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
IFT46Q9NQC8 CREM-210ENST00000374721 2020 ntTSL 5 BASIC22.07■■□□□ 1.12
IFT46Q9NQC8 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
IFT46Q9NQC8 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
IFT46Q9NQC8 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
IFT46Q9NQC8 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC22.06■■□□□ 1.12
IFT46Q9NQC8 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC22.05■■□□□ 1.12
IFT46Q9NQC8 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
IFT46Q9NQC8 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
IFT46Q9NQC8 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC22.05■■□□□ 1.12
IFT46Q9NQC8 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
IFT46Q9NQC8 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
IFT46Q9NQC8 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
IFT46Q9NQC8 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
IFT46Q9NQC8 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
IFT46Q9NQC8 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC22.03■■□□□ 1.12
IFT46Q9NQC8 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
IFT46Q9NQC8 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
IFT46Q9NQC8 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC22.03■■□□□ 1.12
IFT46Q9NQC8 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
IFT46Q9NQC8 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC22.02■■□□□ 1.11
IFT46Q9NQC8 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
IFT46Q9NQC8 WASH5P-204ENST00000632292 975 ntBASIC22.01■■□□□ 1.11
IFT46Q9NQC8 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC22.01■■□□□ 1.11
IFT46Q9NQC8 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC22■■□□□ 1.11
IFT46Q9NQC8 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC22■■□□□ 1.11
IFT46Q9NQC8 CLEC3B-201ENST00000296130 936 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
IFT46Q9NQC8 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
IFT46Q9NQC8 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC22■■□□□ 1.11
IFT46Q9NQC8 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
IFT46Q9NQC8 SNAI3-AS1-204ENST00000567997 2048 ntBASIC21.99■■□□□ 1.11
IFT46Q9NQC8 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
IFT46Q9NQC8 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
IFT46Q9NQC8 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC21.99■■□□□ 1.11
IFT46Q9NQC8 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC21.99■■□□□ 1.11
IFT46Q9NQC8 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC21.99■■□□□ 1.11
IFT46Q9NQC8 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC21.98■■□□□ 1.11
IFT46Q9NQC8 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC21.98■■□□□ 1.11
IFT46Q9NQC8 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC21.98■■□□□ 1.11
IFT46Q9NQC8 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC21.98■■□□□ 1.11
IFT46Q9NQC8 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC21.98■■□□□ 1.11
IFT46Q9NQC8 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
IFT46Q9NQC8 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC21.97■■□□□ 1.11
IFT46Q9NQC8 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC21.97■■□□□ 1.11
IFT46Q9NQC8 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC21.96■■□□□ 1.11
IFT46Q9NQC8 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
IFT46Q9NQC8 SHF-207ENST00000560540 2062 ntTSL 5 BASIC21.96■■□□□ 1.11
IFT46Q9NQC8 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC21.96■■□□□ 1.11
IFT46Q9NQC8 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
IFT46Q9NQC8 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC21.96■■□□□ 1.11
IFT46Q9NQC8 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
IFT46Q9NQC8 AC010864.1-201ENST00000609407 1511 ntBASIC21.96■■□□□ 1.11
IFT46Q9NQC8 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC21.95■■□□□ 1.1
IFT46Q9NQC8 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
IFT46Q9NQC8 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
IFT46Q9NQC8 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
IFT46Q9NQC8 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC21.94■■□□□ 1.1
IFT46Q9NQC8 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC21.94■■□□□ 1.1
IFT46Q9NQC8 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
IFT46Q9NQC8 PKM-204ENST00000449901 2526 ntTSL 2 BASIC21.93■■□□□ 1.1
IFT46Q9NQC8 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
IFT46Q9NQC8 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
IFT46Q9NQC8 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC21.92■■□□□ 1.1
IFT46Q9NQC8 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC21.92■■□□□ 1.1
IFT46Q9NQC8 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC21.92■■□□□ 1.1
IFT46Q9NQC8 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
IFT46Q9NQC8 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
IFT46Q9NQC8 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC21.91■■□□□ 1.1
IFT46Q9NQC8 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
IFT46Q9NQC8 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC21.91■■□□□ 1.1
IFT46Q9NQC8 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
IFT46Q9NQC8 BX255925.1-201ENST00000566954 1854 ntBASIC21.9■■□□□ 1.1
IFT46Q9NQC8 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC21.9■■□□□ 1.1
IFT46Q9NQC8 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
IFT46Q9NQC8 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC21.9■■□□□ 1.1
IFT46Q9NQC8 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
IFT46Q9NQC8 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC21.9■■□□□ 1.1
IFT46Q9NQC8 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
IFT46Q9NQC8 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
IFT46Q9NQC8 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC21.89■■□□□ 1.09
IFT46Q9NQC8 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC21.89■■□□□ 1.09
IFT46Q9NQC8 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
IFT46Q9NQC8 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
IFT46Q9NQC8 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC21.88■■□□□ 1.09
IFT46Q9NQC8 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC21.88■■□□□ 1.09
IFT46Q9NQC8 AP002365.1-201ENST00000603448 772 ntBASIC21.87■■□□□ 1.09
IFT46Q9NQC8 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC21.87■■□□□ 1.09
IFT46Q9NQC8 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
IFT46Q9NQC8 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC21.86■■□□□ 1.09
IFT46Q9NQC8 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC21.85■■□□□ 1.09
IFT46Q9NQC8 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC21.85■■□□□ 1.09
IFT46Q9NQC8 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 11.6 ms