Protein–RNA interactions for Protein: Q9BZA7

PCDH11X, Protocadherin-11 X-linked, humanhuman

Predictions only

Length 1,347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11XQ9BZA7 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC34.5■■■■□ 3.11
PCDH11XQ9BZA7 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC34.5■■■■□ 3.11
PCDH11XQ9BZA7 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC34.49■■■■□ 3.11
PCDH11XQ9BZA7 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC34.49■■■■□ 3.11
PCDH11XQ9BZA7 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC34.49■■■■□ 3.11
PCDH11XQ9BZA7 CHST11-202ENST00000546689 756 ntTSL 2 BASIC34.49■■■■□ 3.11
PCDH11XQ9BZA7 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC34.48■■■■□ 3.11
PCDH11XQ9BZA7 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC34.48■■■■□ 3.11
PCDH11XQ9BZA7 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC34.46■■■■□ 3.11
PCDH11XQ9BZA7 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC34.46■■■■□ 3.11
PCDH11XQ9BZA7 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC34.45■■■■□ 3.11
PCDH11XQ9BZA7 RARRES2P2-201ENST00000394842 485 ntBASIC34.43■■■■□ 3.1
PCDH11XQ9BZA7 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC34.43■■■■□ 3.1
PCDH11XQ9BZA7 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC34.43■■■■□ 3.1
PCDH11XQ9BZA7 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC34.43■■■■□ 3.1
PCDH11XQ9BZA7 AC010864.1-201ENST00000609407 1511 ntBASIC34.43■■■■□ 3.1
PCDH11XQ9BZA7 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC34.42■■■■□ 3.1
PCDH11XQ9BZA7 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC34.42■■■■□ 3.1
PCDH11XQ9BZA7 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC34.41■■■■□ 3.1
PCDH11XQ9BZA7 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC34.41■■■■□ 3.1
PCDH11XQ9BZA7 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC34.4■■■■□ 3.1
PCDH11XQ9BZA7 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC34.4■■■■□ 3.1
PCDH11XQ9BZA7 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC34.38■■■■□ 3.09
PCDH11XQ9BZA7 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC34.38■■■■□ 3.09
PCDH11XQ9BZA7 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC34.38■■■■□ 3.09
PCDH11XQ9BZA7 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC34.38■■■■□ 3.09
PCDH11XQ9BZA7 CSPG5-205ENST00000610462 2073 ntTSL 5 BASIC34.37■■■■□ 3.09
PCDH11XQ9BZA7 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC34.37■■■■□ 3.09
PCDH11XQ9BZA7 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC34.36■■■■□ 3.09
PCDH11XQ9BZA7 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC34.35■■■■□ 3.09
PCDH11XQ9BZA7 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC34.35■■■■□ 3.09
PCDH11XQ9BZA7 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC34.35■■■■□ 3.09
PCDH11XQ9BZA7 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC34.35■■■■□ 3.09
PCDH11XQ9BZA7 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC34.35■■■■□ 3.09
PCDH11XQ9BZA7 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC34.35■■■■□ 3.09
PCDH11XQ9BZA7 GPX1-201ENST00000419349 1106 ntBASIC34.34■■■■□ 3.09
PCDH11XQ9BZA7 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC34.34■■■■□ 3.09
PCDH11XQ9BZA7 TPT1-202ENST00000379055 948 ntTSL 2 BASIC34.32■■■■□ 3.09
PCDH11XQ9BZA7 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC34.32■■■■□ 3.09
PCDH11XQ9BZA7 ABHD17AP5-201ENST00000580133 923 ntBASIC34.31■■■■□ 3.08
PCDH11XQ9BZA7 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC34.31■■■■□ 3.08
PCDH11XQ9BZA7 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC34.3■■■■□ 3.08
PCDH11XQ9BZA7 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC34.3■■■■□ 3.08
PCDH11XQ9BZA7 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC34.28■■■■□ 3.08
PCDH11XQ9BZA7 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC34.28■■■■□ 3.08
PCDH11XQ9BZA7 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC34.28■■■■□ 3.08
PCDH11XQ9BZA7 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC34.28■■■■□ 3.08
PCDH11XQ9BZA7 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC34.27■■■■□ 3.08
PCDH11XQ9BZA7 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC34.27■■■■□ 3.08
PCDH11XQ9BZA7 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC34.27■■■■□ 3.08
PCDH11XQ9BZA7 RNF126P1-201ENST00000567452 1320 ntBASIC34.25■■■■□ 3.07
PCDH11XQ9BZA7 PDXP-201ENST00000215904 2010 ntAPPRIS P1 TSL 1 (best) BASIC34.24■■■■□ 3.07
PCDH11XQ9BZA7 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC34.24■■■■□ 3.07
PCDH11XQ9BZA7 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC34.23■■■■□ 3.07
PCDH11XQ9BZA7 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC34.23■■■■□ 3.07
PCDH11XQ9BZA7 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC34.23■■■■□ 3.07
PCDH11XQ9BZA7 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC34.21■■■■□ 3.07
PCDH11XQ9BZA7 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC34.2■■■■□ 3.07
PCDH11XQ9BZA7 SULT4A1-201ENST00000330884 2468 ntAPPRIS P1 TSL 1 (best) BASIC34.2■■■■□ 3.07
PCDH11XQ9BZA7 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC34.2■■■■□ 3.07
PCDH11XQ9BZA7 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC34.2■■■■□ 3.07
PCDH11XQ9BZA7 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC34.2■■■■□ 3.06
PCDH11XQ9BZA7 GRASP-201ENST00000293662 1933 ntAPPRIS P1 TSL 1 (best) BASIC34.18■■■■□ 3.06
PCDH11XQ9BZA7 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC34.18■■■■□ 3.06
PCDH11XQ9BZA7 CEP120-209ENST00000515110 606 ntTSL 3 BASIC34.18■■■■□ 3.06
PCDH11XQ9BZA7 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC34.18■■■■□ 3.06
PCDH11XQ9BZA7 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC34.17■■■■□ 3.06
PCDH11XQ9BZA7 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC34.17■■■■□ 3.06
PCDH11XQ9BZA7 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC34.17■■■■□ 3.06
PCDH11XQ9BZA7 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC34.17■■■■□ 3.06
PCDH11XQ9BZA7 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC34.16■■■■□ 3.06
PCDH11XQ9BZA7 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC34.16■■■■□ 3.06
PCDH11XQ9BZA7 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC34.16■■■■□ 3.06
PCDH11XQ9BZA7 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC34.15■■■■□ 3.06
PCDH11XQ9BZA7 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC34.15■■■■□ 3.06
PCDH11XQ9BZA7 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC34.15■■■■□ 3.06
PCDH11XQ9BZA7 FBRSL1-201ENST00000434748 5568 ntAPPRIS P2 TSL 1 (best) BASIC34.14■■■■□ 3.06
PCDH11XQ9BZA7 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC34.13■■■■□ 3.05
PCDH11XQ9BZA7 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC34.13■■■■□ 3.05
PCDH11XQ9BZA7 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC34.13■■■■□ 3.05
PCDH11XQ9BZA7 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC34.12■■■■□ 3.05
PCDH11XQ9BZA7 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC34.12■■■■□ 3.05
PCDH11XQ9BZA7 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC34.12■■■■□ 3.05
PCDH11XQ9BZA7 AC008813.1-201ENST00000536597 885 ntBASIC34.12■■■■□ 3.05
PCDH11XQ9BZA7 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC34.12■■■■□ 3.05
PCDH11XQ9BZA7 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC34.11■■■■□ 3.05
PCDH11XQ9BZA7 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC34.11■■■■□ 3.05
PCDH11XQ9BZA7 AC127502.1-201ENST00000399971 1502 ntBASIC34.11■■■■□ 3.05
PCDH11XQ9BZA7 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC34.09■■■■□ 3.05
PCDH11XQ9BZA7 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC34.09■■■■□ 3.05
PCDH11XQ9BZA7 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC34.08■■■■□ 3.05
PCDH11XQ9BZA7 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC34.08■■■■□ 3.05
PCDH11XQ9BZA7 AC135983.2-203ENST00000454486 1613 ntBASIC34.08■■■■□ 3.05
PCDH11XQ9BZA7 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC34.07■■■■□ 3.05
PCDH11XQ9BZA7 WHAMMP2-203ENST00000563942 1603 ntBASIC34.07■■■■□ 3.04
PCDH11XQ9BZA7 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC34.05■■■■□ 3.04
PCDH11XQ9BZA7 AC022413.1-201ENST00000624602 984 ntBASIC34.05■■■■□ 3.04
PCDH11XQ9BZA7 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC34.05■■■■□ 3.04
PCDH11XQ9BZA7 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC34.04■■■■□ 3.04
PCDH11XQ9BZA7 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC34.04■■■■□ 3.04
Retrieved 100 of 98,524 protein–RNA pairs in 17.5 ms