Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
PDLIM5Q96HC4 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC25.48■■□□□ 1.67
PDLIM5Q96HC4 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC25.48■■□□□ 1.67
PDLIM5Q96HC4 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC25.47■■□□□ 1.67
PDLIM5Q96HC4 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC25.47■■□□□ 1.67
PDLIM5Q96HC4 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
PDLIM5Q96HC4 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC25.46■■□□□ 1.67
PDLIM5Q96HC4 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
PDLIM5Q96HC4 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC25.46■■□□□ 1.67
PDLIM5Q96HC4 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
PDLIM5Q96HC4 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC25.45■■□□□ 1.66
PDLIM5Q96HC4 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC25.44■■□□□ 1.66
PDLIM5Q96HC4 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC25.44■■□□□ 1.66
PDLIM5Q96HC4 DUX4L28-201ENST00000623687 678 ntBASIC25.44■■□□□ 1.66
PDLIM5Q96HC4 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC25.44■■□□□ 1.66
PDLIM5Q96HC4 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC25.43■■□□□ 1.66
PDLIM5Q96HC4 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
PDLIM5Q96HC4 MIR3665-201ENST00000578708 105 ntBASIC25.43■■□□□ 1.66
PDLIM5Q96HC4 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC25.42■■□□□ 1.66
PDLIM5Q96HC4 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC25.42■■□□□ 1.66
PDLIM5Q96HC4 AP006261.1-201ENST00000584783 668 ntBASIC25.42■■□□□ 1.66
PDLIM5Q96HC4 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC25.41■■□□□ 1.66
PDLIM5Q96HC4 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
PDLIM5Q96HC4 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC25.41■■□□□ 1.66
PDLIM5Q96HC4 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC25.41■■□□□ 1.66
PDLIM5Q96HC4 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC25.4■■□□□ 1.66
PDLIM5Q96HC4 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC25.4■■□□□ 1.66
PDLIM5Q96HC4 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC25.4■■□□□ 1.66
PDLIM5Q96HC4 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC25.4■■□□□ 1.66
PDLIM5Q96HC4 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
PDLIM5Q96HC4 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC25.39■■□□□ 1.66
PDLIM5Q96HC4 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC25.39■■□□□ 1.66
PDLIM5Q96HC4 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC25.39■■□□□ 1.66
PDLIM5Q96HC4 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC25.39■■□□□ 1.66
PDLIM5Q96HC4 AC142086.6-201ENST00000621154 1765 ntBASIC25.39■■□□□ 1.65
PDLIM5Q96HC4 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC25.39■■□□□ 1.65
PDLIM5Q96HC4 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
PDLIM5Q96HC4 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
PDLIM5Q96HC4 AC108673.1-201ENST00000510422 1159 ntBASIC25.38■■□□□ 1.65
PDLIM5Q96HC4 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
PDLIM5Q96HC4 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
PDLIM5Q96HC4 DRD5P2-201ENST00000421395 2012 ntBASIC25.37■■□□□ 1.65
PDLIM5Q96HC4 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
PDLIM5Q96HC4 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
PDLIM5Q96HC4 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC25.36■■□□□ 1.65
PDLIM5Q96HC4 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC25.35■■□□□ 1.65
PDLIM5Q96HC4 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
PDLIM5Q96HC4 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC25.35■■□□□ 1.65
PDLIM5Q96HC4 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC25.35■■□□□ 1.65
PDLIM5Q96HC4 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC25.35■■□□□ 1.65
PDLIM5Q96HC4 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC25.34■■□□□ 1.65
PDLIM5Q96HC4 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
PDLIM5Q96HC4 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
PDLIM5Q96HC4 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC25.33■■□□□ 1.65
PDLIM5Q96HC4 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC25.32■■□□□ 1.64
PDLIM5Q96HC4 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
PDLIM5Q96HC4 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC25.32■■□□□ 1.64
PDLIM5Q96HC4 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
PDLIM5Q96HC4 NRG1-221ENST00000614767 762 ntTSL 5 BASIC25.31■■□□□ 1.64
PDLIM5Q96HC4 MIR6090-201ENST00000622481 60 ntBASIC25.31■■□□□ 1.64
PDLIM5Q96HC4 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC25.3■■□□□ 1.64
PDLIM5Q96HC4 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC25.29■■□□□ 1.64
PDLIM5Q96HC4 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC25.29■■□□□ 1.64
PDLIM5Q96HC4 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
PDLIM5Q96HC4 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC25.29■■□□□ 1.64
PDLIM5Q96HC4 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
PDLIM5Q96HC4 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC25.28■■□□□ 1.64
PDLIM5Q96HC4 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
PDLIM5Q96HC4 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC25.28■■□□□ 1.64
PDLIM5Q96HC4 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
PDLIM5Q96HC4 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
PDLIM5Q96HC4 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
PDLIM5Q96HC4 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC25.26■■□□□ 1.63
PDLIM5Q96HC4 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC25.26■■□□□ 1.63
PDLIM5Q96HC4 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
PDLIM5Q96HC4 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
PDLIM5Q96HC4 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC25.26■■□□□ 1.63
PDLIM5Q96HC4 AC087741.3-201ENST00000624270 1347 ntBASIC25.26■■□□□ 1.63
PDLIM5Q96HC4 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC25.26■■□□□ 1.63
PDLIM5Q96HC4 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
PDLIM5Q96HC4 EI24-212ENST00000615917 1407 ntTSL 2 BASIC25.25■■□□□ 1.63
PDLIM5Q96HC4 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
PDLIM5Q96HC4 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
PDLIM5Q96HC4 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC25.24■■□□□ 1.63
PDLIM5Q96HC4 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC25.24■■□□□ 1.63
PDLIM5Q96HC4 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC25.23■■□□□ 1.63
PDLIM5Q96HC4 PROC-203ENST00000409048 1586 ntTSL 5 BASIC25.23■■□□□ 1.63
PDLIM5Q96HC4 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
PDLIM5Q96HC4 AL162393.1-201ENST00000437852 946 ntBASIC25.23■■□□□ 1.63
PDLIM5Q96HC4 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC25.23■■□□□ 1.63
PDLIM5Q96HC4 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
PDLIM5Q96HC4 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
PDLIM5Q96HC4 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC25.21■■□□□ 1.63
PDLIM5Q96HC4 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
PDLIM5Q96HC4 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
PDLIM5Q96HC4 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC25.21■■□□□ 1.63
PDLIM5Q96HC4 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
PDLIM5Q96HC4 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
PDLIM5Q96HC4 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC25.2■■□□□ 1.62
PDLIM5Q96HC4 AC135983.2-203ENST00000454486 1613 ntBASIC25.19■■□□□ 1.62
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms