Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
PDLIM5Q96HC4 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC25.48■■□□□ 1.67
PDLIM5Q96HC4 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC25.48■■□□□ 1.67
PDLIM5Q96HC4 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC25.47■■□□□ 1.67
PDLIM5Q96HC4 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC25.47■■□□□ 1.67
PDLIM5Q96HC4 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
PDLIM5Q96HC4 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC25.46■■□□□ 1.67
PDLIM5Q96HC4 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
PDLIM5Q96HC4 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC25.46■■□□□ 1.67
PDLIM5Q96HC4 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
PDLIM5Q96HC4 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC25.45■■□□□ 1.66
PDLIM5Q96HC4 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC25.44■■□□□ 1.66
PDLIM5Q96HC4 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC25.44■■□□□ 1.66
PDLIM5Q96HC4 DUX4L28-201ENST00000623687 678 ntBASIC25.44■■□□□ 1.66
PDLIM5Q96HC4 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC25.44■■□□□ 1.66
PDLIM5Q96HC4 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC25.43■■□□□ 1.66
PDLIM5Q96HC4 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
PDLIM5Q96HC4 MIR3665-201ENST00000578708 105 ntBASIC25.43■■□□□ 1.66
PDLIM5Q96HC4 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC25.42■■□□□ 1.66
PDLIM5Q96HC4 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC25.42■■□□□ 1.66
PDLIM5Q96HC4 AP006261.1-201ENST00000584783 668 ntBASIC25.42■■□□□ 1.66
PDLIM5Q96HC4 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC25.41■■□□□ 1.66
PDLIM5Q96HC4 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
PDLIM5Q96HC4 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC25.41■■□□□ 1.66
PDLIM5Q96HC4 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC25.41■■□□□ 1.66
PDLIM5Q96HC4 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC25.4■■□□□ 1.66
PDLIM5Q96HC4 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC25.4■■□□□ 1.66
PDLIM5Q96HC4 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC25.4■■□□□ 1.66
PDLIM5Q96HC4 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC25.4■■□□□ 1.66
PDLIM5Q96HC4 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
PDLIM5Q96HC4 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC25.39■■□□□ 1.66
PDLIM5Q96HC4 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC25.39■■□□□ 1.66
PDLIM5Q96HC4 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC25.39■■□□□ 1.66
PDLIM5Q96HC4 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC25.39■■□□□ 1.66
PDLIM5Q96HC4 AC142086.6-201ENST00000621154 1765 ntBASIC25.39■■□□□ 1.65
PDLIM5Q96HC4 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC25.39■■□□□ 1.65
PDLIM5Q96HC4 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
PDLIM5Q96HC4 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
PDLIM5Q96HC4 AC108673.1-201ENST00000510422 1159 ntBASIC25.38■■□□□ 1.65
PDLIM5Q96HC4 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
PDLIM5Q96HC4 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
PDLIM5Q96HC4 DRD5P2-201ENST00000421395 2012 ntBASIC25.37■■□□□ 1.65
PDLIM5Q96HC4 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
PDLIM5Q96HC4 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
PDLIM5Q96HC4 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC25.36■■□□□ 1.65
PDLIM5Q96HC4 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC25.35■■□□□ 1.65
PDLIM5Q96HC4 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
PDLIM5Q96HC4 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC25.35■■□□□ 1.65
PDLIM5Q96HC4 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC25.35■■□□□ 1.65
PDLIM5Q96HC4 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC25.35■■□□□ 1.65
PDLIM5Q96HC4 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC25.34■■□□□ 1.65
PDLIM5Q96HC4 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
PDLIM5Q96HC4 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
PDLIM5Q96HC4 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC25.33■■□□□ 1.65
PDLIM5Q96HC4 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC25.32■■□□□ 1.64
PDLIM5Q96HC4 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
PDLIM5Q96HC4 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC25.32■■□□□ 1.64
PDLIM5Q96HC4 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
PDLIM5Q96HC4 NRG1-221ENST00000614767 762 ntTSL 5 BASIC25.31■■□□□ 1.64
PDLIM5Q96HC4 MIR6090-201ENST00000622481 60 ntBASIC25.31■■□□□ 1.64
PDLIM5Q96HC4 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC25.3■■□□□ 1.64
PDLIM5Q96HC4 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC25.29■■□□□ 1.64
PDLIM5Q96HC4 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC25.29■■□□□ 1.64
PDLIM5Q96HC4 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
PDLIM5Q96HC4 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC25.29■■□□□ 1.64
PDLIM5Q96HC4 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
PDLIM5Q96HC4 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC25.28■■□□□ 1.64
PDLIM5Q96HC4 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
PDLIM5Q96HC4 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC25.28■■□□□ 1.64
PDLIM5Q96HC4 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
PDLIM5Q96HC4 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
PDLIM5Q96HC4 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
PDLIM5Q96HC4 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC25.26■■□□□ 1.63
PDLIM5Q96HC4 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC25.26■■□□□ 1.63
PDLIM5Q96HC4 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
PDLIM5Q96HC4 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
PDLIM5Q96HC4 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC25.26■■□□□ 1.63
PDLIM5Q96HC4 AC087741.3-201ENST00000624270 1347 ntBASIC25.26■■□□□ 1.63
PDLIM5Q96HC4 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC25.26■■□□□ 1.63
PDLIM5Q96HC4 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
PDLIM5Q96HC4 EI24-212ENST00000615917 1407 ntTSL 2 BASIC25.25■■□□□ 1.63
PDLIM5Q96HC4 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
PDLIM5Q96HC4 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
PDLIM5Q96HC4 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC25.24■■□□□ 1.63
PDLIM5Q96HC4 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC25.24■■□□□ 1.63
PDLIM5Q96HC4 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC25.23■■□□□ 1.63
PDLIM5Q96HC4 PROC-203ENST00000409048 1586 ntTSL 5 BASIC25.23■■□□□ 1.63
PDLIM5Q96HC4 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
PDLIM5Q96HC4 AL162393.1-201ENST00000437852 946 ntBASIC25.23■■□□□ 1.63
PDLIM5Q96HC4 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC25.23■■□□□ 1.63
PDLIM5Q96HC4 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
PDLIM5Q96HC4 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
PDLIM5Q96HC4 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC25.21■■□□□ 1.63
PDLIM5Q96HC4 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
PDLIM5Q96HC4 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
PDLIM5Q96HC4 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC25.21■■□□□ 1.63
PDLIM5Q96HC4 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
PDLIM5Q96HC4 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
PDLIM5Q96HC4 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC25.2■■□□□ 1.62
PDLIM5Q96HC4 AC135983.2-203ENST00000454486 1613 ntBASIC25.19■■□□□ 1.62
Retrieved 100 of 98,524 protein–RNA pairs in 11.1 ms