Protein–RNA interactions for Protein: Q6MZP7

LIN54, Protein lin-54 homolog, humanhuman

Predictions only

Length 749 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54Q6MZP7 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC22■■□□□ 1.11
LIN54Q6MZP7 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC22■■□□□ 1.11
LIN54Q6MZP7 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
LIN54Q6MZP7 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC21.99■■□□□ 1.11
LIN54Q6MZP7 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
LIN54Q6MZP7 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
LIN54Q6MZP7 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
LIN54Q6MZP7 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
LIN54Q6MZP7 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
LIN54Q6MZP7 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC21.97■■□□□ 1.11
LIN54Q6MZP7 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
LIN54Q6MZP7 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC21.97■■□□□ 1.11
LIN54Q6MZP7 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
LIN54Q6MZP7 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
LIN54Q6MZP7 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC21.95■■□□□ 1.1
LIN54Q6MZP7 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
LIN54Q6MZP7 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC21.94■■□□□ 1.1
LIN54Q6MZP7 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC21.94■■□□□ 1.1
LIN54Q6MZP7 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC21.94■■□□□ 1.1
LIN54Q6MZP7 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
LIN54Q6MZP7 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
LIN54Q6MZP7 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
LIN54Q6MZP7 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
LIN54Q6MZP7 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
LIN54Q6MZP7 DRD5P2-201ENST00000421395 2012 ntBASIC21.93■■□□□ 1.1
LIN54Q6MZP7 KLF16-203ENST00000592313 508 ntTSL 3 BASIC21.93■■□□□ 1.1
LIN54Q6MZP7 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
LIN54Q6MZP7 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
LIN54Q6MZP7 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC21.92■■□□□ 1.1
LIN54Q6MZP7 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC21.92■■□□□ 1.1
LIN54Q6MZP7 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC21.91■■□□□ 1.1
LIN54Q6MZP7 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
LIN54Q6MZP7 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC21.91■■□□□ 1.1
LIN54Q6MZP7 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC21.9■■□□□ 1.1
LIN54Q6MZP7 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC21.9■■□□□ 1.1
LIN54Q6MZP7 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
LIN54Q6MZP7 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
LIN54Q6MZP7 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
LIN54Q6MZP7 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC21.89■■□□□ 1.1
LIN54Q6MZP7 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
LIN54Q6MZP7 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
LIN54Q6MZP7 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
LIN54Q6MZP7 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC21.89■■□□□ 1.09
LIN54Q6MZP7 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
LIN54Q6MZP7 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC21.88■■□□□ 1.09
LIN54Q6MZP7 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC21.88■■□□□ 1.09
LIN54Q6MZP7 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
LIN54Q6MZP7 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
LIN54Q6MZP7 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC21.88■■□□□ 1.09
LIN54Q6MZP7 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC21.88■■□□□ 1.09
LIN54Q6MZP7 AL139393.2-201ENST00000608721 2025 ntBASIC21.87■■□□□ 1.09
LIN54Q6MZP7 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
LIN54Q6MZP7 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC21.87■■□□□ 1.09
LIN54Q6MZP7 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
LIN54Q6MZP7 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
LIN54Q6MZP7 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC21.86■■□□□ 1.09
LIN54Q6MZP7 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
LIN54Q6MZP7 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC21.86■■□□□ 1.09
LIN54Q6MZP7 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC21.86■■□□□ 1.09
LIN54Q6MZP7 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC21.86■■□□□ 1.09
LIN54Q6MZP7 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC21.85■■□□□ 1.09
LIN54Q6MZP7 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC21.85■■□□□ 1.09
LIN54Q6MZP7 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC21.85■■□□□ 1.09
LIN54Q6MZP7 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
LIN54Q6MZP7 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC21.84■■□□□ 1.09
LIN54Q6MZP7 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
LIN54Q6MZP7 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC21.84■■□□□ 1.09
LIN54Q6MZP7 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC21.84■■□□□ 1.09
LIN54Q6MZP7 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC21.83■■□□□ 1.09
LIN54Q6MZP7 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
LIN54Q6MZP7 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
LIN54Q6MZP7 RARRES2P7-201ENST00000567349 469 ntBASIC21.82■■□□□ 1.08
LIN54Q6MZP7 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
LIN54Q6MZP7 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC21.82■■□□□ 1.08
LIN54Q6MZP7 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC21.81■■□□□ 1.08
LIN54Q6MZP7 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
LIN54Q6MZP7 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
LIN54Q6MZP7 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC21.8■■□□□ 1.08
LIN54Q6MZP7 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC21.8■■□□□ 1.08
LIN54Q6MZP7 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
LIN54Q6MZP7 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
LIN54Q6MZP7 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC21.79■■□□□ 1.08
LIN54Q6MZP7 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
LIN54Q6MZP7 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC21.78■■□□□ 1.08
LIN54Q6MZP7 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC21.78■■□□□ 1.08
LIN54Q6MZP7 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC21.78■■□□□ 1.08
LIN54Q6MZP7 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC21.78■■□□□ 1.08
LIN54Q6MZP7 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC21.78■■□□□ 1.08
LIN54Q6MZP7 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
LIN54Q6MZP7 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
LIN54Q6MZP7 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
LIN54Q6MZP7 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
LIN54Q6MZP7 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.07
LIN54Q6MZP7 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
LIN54Q6MZP7 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
LIN54Q6MZP7 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
LIN54Q6MZP7 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
LIN54Q6MZP7 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
LIN54Q6MZP7 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
LIN54Q6MZP7 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 14.2 ms