Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
HIST1H1AQ02539 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
HIST1H1AQ02539 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
HIST1H1AQ02539 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC19.56■□□□□ 0.72
HIST1H1AQ02539 AC136428.2-201ENST00000563187 214 ntBASIC19.56■□□□□ 0.72
HIST1H1AQ02539 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
HIST1H1AQ02539 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC19.56■□□□□ 0.72
HIST1H1AQ02539 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC19.56■□□□□ 0.72
HIST1H1AQ02539 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
HIST1H1AQ02539 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
HIST1H1AQ02539 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
HIST1H1AQ02539 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
HIST1H1AQ02539 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
HIST1H1AQ02539 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
HIST1H1AQ02539 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
HIST1H1AQ02539 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
HIST1H1AQ02539 DENR-202ENST00000455982 1052 ntTSL 5 BASIC19.54■□□□□ 0.72
HIST1H1AQ02539 CAHM-201ENST00000604200 896 ntBASIC19.54■□□□□ 0.72
HIST1H1AQ02539 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
HIST1H1AQ02539 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
HIST1H1AQ02539 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
HIST1H1AQ02539 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
HIST1H1AQ02539 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC19.53■□□□□ 0.72
HIST1H1AQ02539 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
HIST1H1AQ02539 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
HIST1H1AQ02539 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
HIST1H1AQ02539 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC19.52■□□□□ 0.72
HIST1H1AQ02539 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC19.52■□□□□ 0.72
HIST1H1AQ02539 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
HIST1H1AQ02539 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
HIST1H1AQ02539 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC19.51■□□□□ 0.71
HIST1H1AQ02539 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
HIST1H1AQ02539 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
HIST1H1AQ02539 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
HIST1H1AQ02539 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
HIST1H1AQ02539 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
HIST1H1AQ02539 AL139393.2-201ENST00000608721 2025 ntBASIC19.51■□□□□ 0.71
HIST1H1AQ02539 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
HIST1H1AQ02539 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC19.5■□□□□ 0.71
HIST1H1AQ02539 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
HIST1H1AQ02539 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
HIST1H1AQ02539 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
HIST1H1AQ02539 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
HIST1H1AQ02539 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
HIST1H1AQ02539 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
HIST1H1AQ02539 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
HIST1H1AQ02539 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
HIST1H1AQ02539 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC19.48■□□□□ 0.71
HIST1H1AQ02539 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
HIST1H1AQ02539 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
HIST1H1AQ02539 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
HIST1H1AQ02539 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
HIST1H1AQ02539 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
HIST1H1AQ02539 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
HIST1H1AQ02539 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
HIST1H1AQ02539 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
HIST1H1AQ02539 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC19.46■□□□□ 0.71
HIST1H1AQ02539 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
HIST1H1AQ02539 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC19.45■□□□□ 0.7
HIST1H1AQ02539 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
HIST1H1AQ02539 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
HIST1H1AQ02539 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC19.45■□□□□ 0.7
HIST1H1AQ02539 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
HIST1H1AQ02539 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC19.45■□□□□ 0.7
HIST1H1AQ02539 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC19.44■□□□□ 0.7
HIST1H1AQ02539 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
HIST1H1AQ02539 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
HIST1H1AQ02539 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
HIST1H1AQ02539 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
HIST1H1AQ02539 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC19.42■□□□□ 0.7
HIST1H1AQ02539 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
HIST1H1AQ02539 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
HIST1H1AQ02539 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC19.42■□□□□ 0.7
HIST1H1AQ02539 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
HIST1H1AQ02539 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
HIST1H1AQ02539 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC19.41■□□□□ 0.7
HIST1H1AQ02539 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
HIST1H1AQ02539 CREM-210ENST00000374721 2020 ntTSL 5 BASIC19.41■□□□□ 0.7
HIST1H1AQ02539 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
HIST1H1AQ02539 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
HIST1H1AQ02539 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC19.4■□□□□ 0.7
HIST1H1AQ02539 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
HIST1H1AQ02539 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC19.39■□□□□ 0.69
HIST1H1AQ02539 DRD5P2-201ENST00000421395 2012 ntBASIC19.39■□□□□ 0.69
HIST1H1AQ02539 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
HIST1H1AQ02539 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
HIST1H1AQ02539 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
HIST1H1AQ02539 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC19.38■□□□□ 0.69
HIST1H1AQ02539 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
HIST1H1AQ02539 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
HIST1H1AQ02539 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
HIST1H1AQ02539 MIR762-201ENST00000390236 83 ntBASIC19.37■□□□□ 0.69
HIST1H1AQ02539 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
HIST1H1AQ02539 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
HIST1H1AQ02539 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC19.36■□□□□ 0.69
HIST1H1AQ02539 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC19.36■□□□□ 0.69
HIST1H1AQ02539 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC19.36■□□□□ 0.69
HIST1H1AQ02539 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
HIST1H1AQ02539 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
HIST1H1AQ02539 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 273 ms