Protein–RNA interactions for Protein: P40965

MSH4, MutS protein homolog 4, yeastyeast

Predicted RBP Predictions only

Length 878 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
MSH4P40965 YDR306CYDR306C 1437 nt9.9□□□□□ -0.82
MSH4P40965 YMR007WYMR007W 381 nt9.9□□□□□ -0.82
MSH4P40965 AMF1YOR378W 1548 nt9.89□□□□□ -0.83
MSH4P40965 CYC3YAL039C 810 nt9.89□□□□□ -0.83
MSH4P40965 RCR1YBR005W 642 nt9.89□□□□□ -0.83
MSH4P40965 SWM1YDR260C 513 nt9.88□□□□□ -0.83
MSH4P40965 PCP1YGR101W 1041 nt9.88□□□□□ -0.83
MSH4P40965 PHB2YGR231C 933 nt9.88□□□□□ -0.83
MSH4P40965 YNR064CYNR064C 873 nt9.88□□□□□ -0.83
MSH4P40965 SER2YGR208W 930 nt9.87□□□□□ -0.83
MSH4P40965 YKR012CYKR012C 378 nt9.87□□□□□ -0.83
MSH4P40965 ODC1YPL134C 933 nt9.87□□□□□ -0.83
MSH4P40965 DMA2YNL116W 1569 nt9.87□□□□□ -0.83
MSH4P40965 YHR219WYHR219W 1875 nt9.87□□□□□ -0.83
MSH4P40965 SSL2YIL143C 2532 nt9.87□□□□□ -0.83
MSH4P40965 BUD20YLR074C 501 nt9.86□□□□□ -0.83
MSH4P40965 YKL133CYKL133C 1392 nt9.85□□□□□ -0.83
MSH4P40965 LEU2YCL018W 1095 nt9.84□□□□□ -0.83
MSH4P40965 HEM14YER014W 1620 nt9.84□□□□□ -0.83
MSH4P40965 DLD3YEL071W 1491 nt9.84□□□□□ -0.83
MSH4P40965 HTS1YPR033C 1641 nt9.83□□□□□ -0.84
MSH4P40965 ITR2YOL103W 1830 nt9.83□□□□□ -0.84
MSH4P40965 MDL2YPL270W 2322 nt9.82□□□□□ -0.84
MSH4P40965 PAB1YER165W 1734 nt9.82□□□□□ -0.84
MSH4P40965 ELO1YJL196C 933 nt9.81□□□□□ -0.84
MSH4P40965 FCY1YPR062W 477 nt9.8□□□□□ -0.84
MSH4P40965 TGA1tA(UGC)A 73 nt9.79□□□□□ -0.84
MSH4P40965 tA(UGC)EtA(UGC)E 73 nt9.79□□□□□ -0.84
MSH4P40965 tA(UGC)GtA(UGC)G 73 nt9.79□□□□□ -0.84
MSH4P40965 tA(UGC)LtA(UGC)L 73 nt9.79□□□□□ -0.84
MSH4P40965 tA(UGC)OtA(UGC)O 73 nt9.79□□□□□ -0.84
MSH4P40965 YHR218WYHR218W 1812 nt9.79□□□□□ -0.84
MSH4P40965 NAM8YHR086W 1572 nt9.78□□□□□ -0.84
MSH4P40965 ENO1YGR254W 1314 nt9.77□□□□□ -0.85
MSH4P40965 TPN1YGL186C 1740 nt9.76□□□□□ -0.85
MSH4P40965 KEL3YPL263C 1956 nt9.75□□□□□ -0.85
MSH4P40965 PUS7YOR243C 2031 nt9.75□□□□□ -0.85
MSH4P40965 MEX67YPL169C 1800 nt9.75□□□□□ -0.85
MSH4P40965 SWT21YNL187W 1074 nt9.75□□□□□ -0.85
MSH4P40965 SFL1YOR140W 2301 nt9.74□□□□□ -0.85
MSH4P40965 LSR1LSR1 1175 nt9.74□□□□□ -0.85
MSH4P40965 SDS24YBR214W 1584 nt9.73□□□□□ -0.85
MSH4P40965 SRP102YKL154W 735 nt9.73□□□□□ -0.85
MSH4P40965 YLR280CYLR280C 351 nt9.73□□□□□ -0.85
MSH4P40965 REG2YBR050C 1017 nt9.73□□□□□ -0.85
MSH4P40965 SUV3YPL029W 2214 nt9.72□□□□□ -0.85
MSH4P40965 VMA11YPL234C 495 nt9.72□□□□□ -0.85
MSH4P40965 ERO1YML130C 1692 nt9.71□□□□□ -0.85
MSH4P40965 YGR210CYGR210C 1236 nt9.71□□□□□ -0.86
MSH4P40965 MDM35YKL053C-A 261 nt9.7□□□□□ -0.86
MSH4P40965 YMR265CYMR265C 1386 nt9.7□□□□□ -0.86
MSH4P40965 TOM71YHR117W 1920 nt9.69□□□□□ -0.86
MSH4P40965 CWP2YKL096W-A 279 nt9.69□□□□□ -0.86
MSH4P40965 MET1YKR069W 1782 nt9.69□□□□□ -0.86
MSH4P40965 HAP5YOR358W 729 nt9.69□□□□□ -0.86
MSH4P40965 HXT10YFL011W 1641 nt9.68□□□□□ -0.86
MSH4P40965 REX2YLR059C 810 nt9.67□□□□□ -0.86
MSH4P40965 YOR343CYOR343C 327 nt9.67□□□□□ -0.86
MSH4P40965 GRH1YDR517W 1119 nt9.65□□□□□ -0.86
MSH4P40965 PAM17YKR065C 594 nt9.65□□□□□ -0.86
MSH4P40965 CRC1YOR100C 984 nt9.65□□□□□ -0.86
MSH4P40965 snR31snR31 225 nt9.65□□□□□ -0.86
MSH4P40965 VBA3YCL069W 1377 nt9.64□□□□□ -0.87
MSH4P40965 RPD3YNL330C 1302 nt9.64□□□□□ -0.87
MSH4P40965 HRA1HRA1 564 nt9.64□□□□□ -0.87
MSH4P40965 YKL053WYKL053W 375 nt9.64□□□□□ -0.87
MSH4P40965 SNX3YOR357C 489 nt9.64□□□□□ -0.87
MSH4P40965 RPN14YGL004C 1254 nt9.63□□□□□ -0.87
MSH4P40965 RIM2YBR192W 1134 nt9.63□□□□□ -0.87
MSH4P40965 LPD1YFL018C 1500 nt9.62□□□□□ -0.87
MSH4P40965 RPL12BYDR418W 498 nt9.62□□□□□ -0.87
MSH4P40965 YAL016C-AYAL016C-A 315 nt9.62□□□□□ -0.87
MSH4P40965 SRP54YPR088C 1626 nt9.62□□□□□ -0.87
MSH4P40965 UFD1YGR048W 1086 nt9.61□□□□□ -0.87
MSH4P40965 NAS6YGR232W 687 nt9.61□□□□□ -0.87
MSH4P40965 ALR1YOL130W 2580 nt9.6□□□□□ -0.87
MSH4P40965 YPL108WYPL108W 507 nt9.6□□□□□ -0.87
MSH4P40965 EMC3YKL207W 762 nt9.59□□□□□ -0.87
MSH4P40965 SAN1YDR143C 1833 nt9.57□□□□□ -0.88
MSH4P40965 FRA1YLL029W 2250 nt9.56□□□□□ -0.88
MSH4P40965 DPL1YDR294C 1770 nt9.56□□□□□ -0.88
MSH4P40965 YEL009C-AYEL009C-A 408 nt9.56□□□□□ -0.88
MSH4P40965 AGP3YFL055W 1677 nt9.55□□□□□ -0.88
MSH4P40965 KGD2YDR148C 1392 nt9.54□□□□□ -0.88
MSH4P40965 YJL160CYJL160C 864 nt9.54□□□□□ -0.88
MSH4P40965 YPT11YNL304W 1254 nt9.54□□□□□ -0.88
MSH4P40965 YMR210WYMR210W 1350 nt9.53□□□□□ -0.88
MSH4P40965 YRF1-2YER190W 5046 nt9.52□□□□□ -0.89
MSH4P40965 RPC31YNL151C 756 nt9.52□□□□□ -0.89
MSH4P40965 FIT1YDR534C 1587 nt9.51□□□□□ -0.89
MSH4P40965 RSM7YJR113C 744 nt9.51□□□□□ -0.89
MSH4P40965 LSP1YPL004C 1026 nt9.51□□□□□ -0.89
MSH4P40965 KRR1YCL059C 951 nt9.5□□□□□ -0.89
MSH4P40965 MRP1YDR347W 966 nt9.5□□□□□ -0.89
MSH4P40965 YFR020WYFR020W 699 nt9.5□□□□□ -0.89
MSH4P40965 YOR268CYOR268C 399 nt9.49□□□□□ -0.89
MSH4P40965 NBA1YOL070C 1506 nt9.48□□□□□ -0.89
MSH4P40965 YMR166CYMR166C 1107 nt9.47□□□□□ -0.89
MSH4P40965 NSG2YNL156C 900 nt9.47□□□□□ -0.89
MSH4P40965 ARA2YMR041C 1008 nt9.46□□□□□ -0.9
Retrieved 100 of 7,029 protein–RNA pairs in 63.9 ms