Protein–RNA interactions for Protein: P25067

COL8A2, Collagen alpha-2(VIII) chain, humanhuman

Predictions only

Length 703 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A2P25067 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC21.98■■□□□ 1.11
COL8A2P25067 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
COL8A2P25067 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
COL8A2P25067 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
COL8A2P25067 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC21.96■■□□□ 1.11
COL8A2P25067 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC21.96■■□□□ 1.11
COL8A2P25067 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC21.96■■□□□ 1.11
COL8A2P25067 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
COL8A2P25067 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC21.95■■□□□ 1.1
COL8A2P25067 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC21.95■■□□□ 1.1
COL8A2P25067 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
COL8A2P25067 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
COL8A2P25067 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
COL8A2P25067 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC21.94■■□□□ 1.1
COL8A2P25067 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
COL8A2P25067 AGPS-202ENST00000409888 815 ntTSL 4 BASIC21.94■■□□□ 1.1
COL8A2P25067 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC21.94■■□□□ 1.1
COL8A2P25067 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC21.94■■□□□ 1.1
COL8A2P25067 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC21.94■■□□□ 1.1
COL8A2P25067 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
COL8A2P25067 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC21.93■■□□□ 1.1
COL8A2P25067 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
COL8A2P25067 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
COL8A2P25067 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC21.93■■□□□ 1.1
COL8A2P25067 CR559946.2-201ENST00000623684 991 ntBASIC21.93■■□□□ 1.1
COL8A2P25067 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
COL8A2P25067 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC21.92■■□□□ 1.1
COL8A2P25067 MIR639-201ENST00000384974 98 ntBASIC21.92■■□□□ 1.1
COL8A2P25067 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC21.92■■□□□ 1.1
COL8A2P25067 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC21.91■■□□□ 1.1
COL8A2P25067 AC127502.1-201ENST00000399971 1502 ntBASIC21.91■■□□□ 1.1
COL8A2P25067 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
COL8A2P25067 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC21.91■■□□□ 1.1
COL8A2P25067 LINC00273-201ENST00000539813 1452 ntBASIC21.9■■□□□ 1.1
COL8A2P25067 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
COL8A2P25067 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC21.9■■□□□ 1.1
COL8A2P25067 DUX4L13-201ENST00000554103 1267 ntBASIC21.9■■□□□ 1.1
COL8A2P25067 DUX4L15-201ENST00000611059 1267 ntBASIC21.9■■□□□ 1.1
COL8A2P25067 DUX4L23-201ENST00000615195 1269 ntBASIC21.9■■□□□ 1.1
COL8A2P25067 DUX4L24-201ENST00000617576 1269 ntBASIC21.9■■□□□ 1.1
COL8A2P25067 DUX4L22-201ENST00000618238 1269 ntBASIC21.9■■□□□ 1.1
COL8A2P25067 DUX4L20-201ENST00000619712 1269 ntBASIC21.9■■□□□ 1.1
COL8A2P25067 DUX4L21-201ENST00000622058 1269 ntBASIC21.9■■□□□ 1.1
COL8A2P25067 DUX4L10-201ENST00000622460 1267 ntBASIC21.9■■□□□ 1.1
COL8A2P25067 DUX4L25-201ENST00000624915 1269 ntBASIC21.9■■□□□ 1.1
COL8A2P25067 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
COL8A2P25067 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
COL8A2P25067 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC21.9■■□□□ 1.1
COL8A2P25067 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC21.89■■□□□ 1.09
COL8A2P25067 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
COL8A2P25067 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
COL8A2P25067 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC21.88■■□□□ 1.09
COL8A2P25067 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
COL8A2P25067 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
COL8A2P25067 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC21.88■■□□□ 1.09
COL8A2P25067 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC21.88■■□□□ 1.09
COL8A2P25067 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
COL8A2P25067 CHML-204ENST00000638121 920 ntTSL 2 BASIC21.88■■□□□ 1.09
COL8A2P25067 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
COL8A2P25067 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
COL8A2P25067 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC21.87■■□□□ 1.09
COL8A2P25067 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC21.87■■□□□ 1.09
COL8A2P25067 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC21.87■■□□□ 1.09
COL8A2P25067 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC21.87■■□□□ 1.09
COL8A2P25067 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
COL8A2P25067 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
COL8A2P25067 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
COL8A2P25067 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
COL8A2P25067 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC21.84■■□□□ 1.09
COL8A2P25067 MIR4449-201ENST00000578365 66 ntBASIC21.84■■□□□ 1.09
COL8A2P25067 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC21.84■■□□□ 1.09
COL8A2P25067 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
COL8A2P25067 HES6-205ENST00000409356 528 ntTSL 2 BASIC21.83■■□□□ 1.09
COL8A2P25067 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC21.83■■□□□ 1.09
COL8A2P25067 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
COL8A2P25067 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC21.82■■□□□ 1.08
COL8A2P25067 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC21.82■■□□□ 1.08
COL8A2P25067 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC21.82■■□□□ 1.08
COL8A2P25067 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
COL8A2P25067 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
COL8A2P25067 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
COL8A2P25067 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC21.81■■□□□ 1.08
COL8A2P25067 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC21.81■■□□□ 1.08
COL8A2P25067 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
COL8A2P25067 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC21.8■■□□□ 1.08
COL8A2P25067 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC21.8■■□□□ 1.08
COL8A2P25067 METRNL-202ENST00000570778 967 ntTSL 5 BASIC21.79■■□□□ 1.08
COL8A2P25067 ST7-AS1-201ENST00000456775 1889 ntBASIC21.79■■□□□ 1.08
COL8A2P25067 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
COL8A2P25067 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
COL8A2P25067 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
COL8A2P25067 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC21.78■■□□□ 1.08
COL8A2P25067 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
COL8A2P25067 CHST11-202ENST00000546689 756 ntTSL 2 BASIC21.77■■□□□ 1.08
COL8A2P25067 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.07
COL8A2P25067 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
COL8A2P25067 AC135983.2-203ENST00000454486 1613 ntBASIC21.77■■□□□ 1.07
COL8A2P25067 WHAMMP2-203ENST00000563942 1603 ntBASIC21.77■■□□□ 1.07
COL8A2P25067 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC21.76■■□□□ 1.07
COL8A2P25067 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 18.3 ms