Protein–RNA interactions for Protein: P12838

DEFA4, Neutrophil defensin 4, humanhuman

Predictions only

Length 97 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEFA4P12838 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
DEFA4P12838 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
DEFA4P12838 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
DEFA4P12838 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
DEFA4P12838 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
DEFA4P12838 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
DEFA4P12838 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC20.78■□□□□ 0.92
DEFA4P12838 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
DEFA4P12838 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC20.77■□□□□ 0.92
DEFA4P12838 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
DEFA4P12838 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
DEFA4P12838 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
DEFA4P12838 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
DEFA4P12838 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
DEFA4P12838 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC20.77■□□□□ 0.91
DEFA4P12838 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
DEFA4P12838 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
DEFA4P12838 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC20.76■□□□□ 0.91
DEFA4P12838 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC20.76■□□□□ 0.91
DEFA4P12838 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
DEFA4P12838 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
DEFA4P12838 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC20.75■□□□□ 0.91
DEFA4P12838 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
DEFA4P12838 CAHM-201ENST00000604200 896 ntBASIC20.75■□□□□ 0.91
DEFA4P12838 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
DEFA4P12838 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
DEFA4P12838 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
DEFA4P12838 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC20.74■□□□□ 0.91
DEFA4P12838 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
DEFA4P12838 DENR-202ENST00000455982 1052 ntTSL 5 BASIC20.74■□□□□ 0.91
DEFA4P12838 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC20.74■□□□□ 0.91
DEFA4P12838 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
DEFA4P12838 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC20.73■□□□□ 0.91
DEFA4P12838 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
DEFA4P12838 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
DEFA4P12838 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
DEFA4P12838 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
DEFA4P12838 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
DEFA4P12838 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC20.72■□□□□ 0.91
DEFA4P12838 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC20.72■□□□□ 0.91
DEFA4P12838 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
DEFA4P12838 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
DEFA4P12838 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
DEFA4P12838 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
DEFA4P12838 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC20.71■□□□□ 0.91
DEFA4P12838 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
DEFA4P12838 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC20.7■□□□□ 0.91
DEFA4P12838 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
DEFA4P12838 AC010864.1-201ENST00000609407 1511 ntBASIC20.7■□□□□ 0.9
DEFA4P12838 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
DEFA4P12838 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC20.7■□□□□ 0.9
DEFA4P12838 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
DEFA4P12838 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
DEFA4P12838 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC20.68■□□□□ 0.9
DEFA4P12838 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
DEFA4P12838 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
DEFA4P12838 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
DEFA4P12838 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC20.67■□□□□ 0.9
DEFA4P12838 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC20.67■□□□□ 0.9
DEFA4P12838 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC20.67■□□□□ 0.9
DEFA4P12838 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
DEFA4P12838 DRD5P2-201ENST00000421395 2012 ntBASIC20.66■□□□□ 0.9
DEFA4P12838 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
DEFA4P12838 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
DEFA4P12838 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
DEFA4P12838 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
DEFA4P12838 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC20.66■□□□□ 0.9
DEFA4P12838 AL139393.2-201ENST00000608721 2025 ntBASIC20.66■□□□□ 0.9
DEFA4P12838 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
DEFA4P12838 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC20.65■□□□□ 0.9
DEFA4P12838 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
DEFA4P12838 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
DEFA4P12838 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
DEFA4P12838 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
DEFA4P12838 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
DEFA4P12838 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
DEFA4P12838 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC20.63■□□□□ 0.89
DEFA4P12838 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC20.63■□□□□ 0.89
DEFA4P12838 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
DEFA4P12838 AL121749.1-202ENST00000609313 2153 ntBASIC20.62■□□□□ 0.89
DEFA4P12838 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
DEFA4P12838 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
DEFA4P12838 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
DEFA4P12838 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
DEFA4P12838 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
DEFA4P12838 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
DEFA4P12838 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
DEFA4P12838 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
DEFA4P12838 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
DEFA4P12838 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC20.6■□□□□ 0.89
DEFA4P12838 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
DEFA4P12838 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC20.59■□□□□ 0.89
DEFA4P12838 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
DEFA4P12838 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
DEFA4P12838 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC20.58■□□□□ 0.89
DEFA4P12838 MIR762-201ENST00000390236 83 ntBASIC20.58■□□□□ 0.89
DEFA4P12838 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC20.58■□□□□ 0.89
DEFA4P12838 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
DEFA4P12838 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
DEFA4P12838 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC20.57■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms