Protein–RNA interactions for Protein: P06753

TPM3, Tropomyosin alpha-3 chain, humanhuman

Predictions only

Length 285 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P06753 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC28.91■■■□□ 2.22
TPM3P06753 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC28.91■■■□□ 2.22
TPM3P06753 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC28.9■■■□□ 2.22
TPM3P06753 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC28.9■■■□□ 2.22
TPM3P06753 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC28.9■■■□□ 2.22
TPM3P06753 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC28.9■■■□□ 2.22
TPM3P06753 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC28.9■■■□□ 2.22
TPM3P06753 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC28.89■■■□□ 2.22
TPM3P06753 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC28.89■■■□□ 2.21
TPM3P06753 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC28.88■■■□□ 2.21
TPM3P06753 WASH5P-204ENST00000632292 975 ntBASIC28.88■■■□□ 2.21
TPM3P06753 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC28.88■■■□□ 2.21
TPM3P06753 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC28.87■■■□□ 2.21
TPM3P06753 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC28.87■■■□□ 2.21
TPM3P06753 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC28.86■■■□□ 2.21
TPM3P06753 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC28.85■■■□□ 2.21
TPM3P06753 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC28.85■■■□□ 2.21
TPM3P06753 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC28.85■■■□□ 2.21
TPM3P06753 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC28.85■■■□□ 2.21
TPM3P06753 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC28.84■■■□□ 2.21
TPM3P06753 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC28.83■■■□□ 2.21
TPM3P06753 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC28.83■■■□□ 2.21
TPM3P06753 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC28.82■■■□□ 2.2
TPM3P06753 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC28.81■■■□□ 2.2
TPM3P06753 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC28.81■■■□□ 2.2
TPM3P06753 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC28.81■■■□□ 2.2
TPM3P06753 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC28.8■■■□□ 2.2
TPM3P06753 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC28.8■■■□□ 2.2
TPM3P06753 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC28.8■■■□□ 2.2
TPM3P06753 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC28.8■■■□□ 2.2
TPM3P06753 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC28.8■■■□□ 2.2
TPM3P06753 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC28.78■■■□□ 2.2
TPM3P06753 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC28.78■■■□□ 2.2
TPM3P06753 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC28.78■■■□□ 2.2
TPM3P06753 BX255925.1-201ENST00000566954 1854 ntBASIC28.77■■■□□ 2.2
TPM3P06753 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC28.77■■■□□ 2.2
TPM3P06753 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC28.77■■■□□ 2.2
TPM3P06753 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC28.77■■■□□ 2.2
TPM3P06753 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC28.77■■■□□ 2.2
TPM3P06753 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC28.77■■■□□ 2.2
TPM3P06753 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC28.77■■■□□ 2.2
TPM3P06753 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC28.76■■■□□ 2.19
TPM3P06753 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC28.76■■■□□ 2.19
TPM3P06753 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC28.75■■■□□ 2.19
TPM3P06753 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC28.75■■■□□ 2.19
TPM3P06753 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC28.75■■■□□ 2.19
TPM3P06753 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC28.74■■■□□ 2.19
TPM3P06753 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC28.73■■■□□ 2.19
TPM3P06753 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC28.73■■■□□ 2.19
TPM3P06753 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC28.73■■■□□ 2.19
TPM3P06753 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC28.73■■■□□ 2.19
TPM3P06753 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC28.73■■■□□ 2.19
TPM3P06753 SHF-208ENST00000560734 1731 ntTSL 3 BASIC28.72■■■□□ 2.19
TPM3P06753 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC28.72■■■□□ 2.19
TPM3P06753 MAF-203ENST00000569649 1217 ntAPPRIS ALT2 TSL 5 BASIC28.72■■■□□ 2.19
TPM3P06753 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC28.72■■■□□ 2.19
TPM3P06753 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC28.72■■■□□ 2.19
TPM3P06753 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC28.71■■■□□ 2.19
TPM3P06753 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC28.71■■■□□ 2.19
TPM3P06753 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC28.71■■■□□ 2.19
TPM3P06753 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC28.71■■■□□ 2.19
TPM3P06753 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC28.7■■■□□ 2.19
TPM3P06753 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC28.7■■■□□ 2.18
TPM3P06753 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC28.69■■■□□ 2.18
TPM3P06753 AC010864.1-201ENST00000609407 1511 ntBASIC28.69■■■□□ 2.18
TPM3P06753 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC28.68■■■□□ 2.18
TPM3P06753 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC28.68■■■□□ 2.18
TPM3P06753 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC28.67■■■□□ 2.18
TPM3P06753 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC28.67■■■□□ 2.18
TPM3P06753 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC28.67■■■□□ 2.18
TPM3P06753 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC28.67■■■□□ 2.18
TPM3P06753 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC28.67■■■□□ 2.18
TPM3P06753 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC28.67■■■□□ 2.18
TPM3P06753 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC28.66■■■□□ 2.18
TPM3P06753 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC28.66■■■□□ 2.18
TPM3P06753 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC28.66■■■□□ 2.18
TPM3P06753 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC28.66■■■□□ 2.18
TPM3P06753 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC28.65■■■□□ 2.18
TPM3P06753 KLF16-203ENST00000592313 508 ntTSL 3 BASIC28.65■■■□□ 2.18
TPM3P06753 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC28.65■■■□□ 2.18
TPM3P06753 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC28.64■■■□□ 2.18
TPM3P06753 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC28.64■■■□□ 2.18
TPM3P06753 AL133380.1-201ENST00000506013 324 ntBASIC28.64■■■□□ 2.18
TPM3P06753 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC28.64■■■□□ 2.18
TPM3P06753 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC28.64■■■□□ 2.17
TPM3P06753 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC28.63■■■□□ 2.17
TPM3P06753 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC28.63■■■□□ 2.17
TPM3P06753 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC28.63■■■□□ 2.17
TPM3P06753 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC28.63■■■□□ 2.17
TPM3P06753 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC28.62■■■□□ 2.17
TPM3P06753 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC28.62■■■□□ 2.17
TPM3P06753 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC28.62■■■□□ 2.17
TPM3P06753 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC28.62■■■□□ 2.17
TPM3P06753 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC28.62■■■□□ 2.17
TPM3P06753 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC28.61■■■□□ 2.17
TPM3P06753 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC28.61■■■□□ 2.17
TPM3P06753 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC28.6■■■□□ 2.17
TPM3P06753 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC28.6■■■□□ 2.17
TPM3P06753 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC28.6■■■□□ 2.17
TPM3P06753 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC28.6■■■□□ 2.17
Retrieved 100 of 98,524 protein–RNA pairs in 55.4 ms