Protein–RNA interactions for Protein: O14817

TSPAN4, Tetraspanin-4, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4O14817 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
TSPAN4O14817 SAP30-201ENST00000296504 1108 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
TSPAN4O14817 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.02
TSPAN4O14817 ADRA2C-202ENST00000509482 1600 ntTSL 3 BASIC21.43■■□□□ 1.02
TSPAN4O14817 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
TSPAN4O14817 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC21.43■■□□□ 1.02
TSPAN4O14817 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC21.43■■□□□ 1.02
TSPAN4O14817 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC21.43■■□□□ 1.02
TSPAN4O14817 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
TSPAN4O14817 SH3GL1-202ENST00000417295 1404 ntTSL 2 BASIC21.42■■□□□ 1.02
TSPAN4O14817 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
TSPAN4O14817 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
TSPAN4O14817 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
TSPAN4O14817 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
TSPAN4O14817 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
TSPAN4O14817 FBXO2-201ENST00000354287 1560 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
TSPAN4O14817 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC21.39■■□□□ 1.01
TSPAN4O14817 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC21.39■■□□□ 1.01
TSPAN4O14817 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC21.39■■□□□ 1.01
TSPAN4O14817 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
TSPAN4O14817 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
TSPAN4O14817 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC21.37■■□□□ 1.01
TSPAN4O14817 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
TSPAN4O14817 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
TSPAN4O14817 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC21.36■■□□□ 1.01
TSPAN4O14817 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
TSPAN4O14817 PCYT2-205ENST00000570391 1857 ntTSL 2 BASIC21.36■■□□□ 1.01
TSPAN4O14817 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC21.36■■□□□ 1.01
TSPAN4O14817 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
TSPAN4O14817 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC21.35■■□□□ 1.01
TSPAN4O14817 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC21.35■■□□□ 1.01
TSPAN4O14817 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC21.35■■□□□ 1.01
TSPAN4O14817 LTB4R2-204ENST00000533293 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
TSPAN4O14817 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
TSPAN4O14817 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC21.34■■□□□ 1.01
TSPAN4O14817 AL031258.1-201ENST00000623562 325 ntBASIC21.34■■□□□ 1.01
TSPAN4O14817 ANXA5-201ENST00000296511 1762 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
TSPAN4O14817 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
TSPAN4O14817 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
TSPAN4O14817 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
TSPAN4O14817 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
TSPAN4O14817 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
TSPAN4O14817 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC21.31■■□□□ 1
TSPAN4O14817 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC21.3■■□□□ 1
TSPAN4O14817 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
TSPAN4O14817 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC21.3■■□□□ 1
TSPAN4O14817 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
TSPAN4O14817 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC21.3■■□□□ 1
TSPAN4O14817 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
TSPAN4O14817 CYP26C1-201ENST00000285949 1569 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
TSPAN4O14817 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
TSPAN4O14817 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC21.29■■□□□ 1
TSPAN4O14817 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
TSPAN4O14817 VPS37D-201ENST00000324941 1624 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
TSPAN4O14817 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC21.29■■□□□ 1
TSPAN4O14817 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC21.28■■□□□ 1
TSPAN4O14817 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC21.28■■□□□ 1
TSPAN4O14817 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC21.28■■□□□ 1
TSPAN4O14817 AL449106.1-201ENST00000608517 1980 ntBASIC21.28■■□□□ 1
TSPAN4O14817 MSANTD3-203ENST00000395067 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
TSPAN4O14817 EBPL-203ENST00000378270 579 ntTSL 2 BASIC21.27■■□□□ 1
TSPAN4O14817 MVK-208ENST00000539696 608 ntTSL 5 BASIC21.27■■□□□ 1
TSPAN4O14817 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
TSPAN4O14817 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
TSPAN4O14817 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
TSPAN4O14817 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
TSPAN4O14817 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
TSPAN4O14817 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
TSPAN4O14817 GNB5-202ENST00000358784 1735 ntAPPRIS ALT1 TSL 1 (best) BASIC21.25■□□□□ 0.99
TSPAN4O14817 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
TSPAN4O14817 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC21.24■□□□□ 0.99
TSPAN4O14817 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
TSPAN4O14817 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
TSPAN4O14817 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
TSPAN4O14817 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
TSPAN4O14817 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
TSPAN4O14817 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
TSPAN4O14817 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
TSPAN4O14817 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
TSPAN4O14817 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
TSPAN4O14817 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
TSPAN4O14817 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
TSPAN4O14817 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC21.22■□□□□ 0.99
TSPAN4O14817 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC21.22■□□□□ 0.99
TSPAN4O14817 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
TSPAN4O14817 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
TSPAN4O14817 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
TSPAN4O14817 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
TSPAN4O14817 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
TSPAN4O14817 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
TSPAN4O14817 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
TSPAN4O14817 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
TSPAN4O14817 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
TSPAN4O14817 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
TSPAN4O14817 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
TSPAN4O14817 AC093323.1-202ENST00000635031 2045 ntBASIC21.18■□□□□ 0.98
TSPAN4O14817 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC21.18■□□□□ 0.98
TSPAN4O14817 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
TSPAN4O14817 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
TSPAN4O14817 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC21.17■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 74.5 ms