Protein–RNA interactions for Protein: A0A140T963

RNF103-CHMP3, RNF103-CHMP3 readthrough (Fragment), humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF103-CHMP3A0A140T963 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
RNF103-CHMP3A0A140T963 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
RNF103-CHMP3A0A140T963 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
RNF103-CHMP3A0A140T963 EBPL-202ENST00000378268 680 ntTSL 3 BASIC24.67■■□□□ 1.54
RNF103-CHMP3A0A140T963 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
RNF103-CHMP3A0A140T963 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC24.67■■□□□ 1.54
RNF103-CHMP3A0A140T963 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
RNF103-CHMP3A0A140T963 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC24.66■■□□□ 1.54
RNF103-CHMP3A0A140T963 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
RNF103-CHMP3A0A140T963 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC24.66■■□□□ 1.54
RNF103-CHMP3A0A140T963 AC136428.2-201ENST00000563187 214 ntBASIC24.66■■□□□ 1.54
RNF103-CHMP3A0A140T963 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC24.65■■□□□ 1.54
RNF103-CHMP3A0A140T963 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC24.65■■□□□ 1.54
RNF103-CHMP3A0A140T963 AC097358.2-201ENST00000607541 1159 ntBASIC24.65■■□□□ 1.54
RNF103-CHMP3A0A140T963 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
RNF103-CHMP3A0A140T963 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
RNF103-CHMP3A0A140T963 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
RNF103-CHMP3A0A140T963 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC24.64■■□□□ 1.54
RNF103-CHMP3A0A140T963 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
RNF103-CHMP3A0A140T963 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC24.64■■□□□ 1.54
RNF103-CHMP3A0A140T963 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC24.64■■□□□ 1.53
RNF103-CHMP3A0A140T963 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
RNF103-CHMP3A0A140T963 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
RNF103-CHMP3A0A140T963 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
RNF103-CHMP3A0A140T963 DENR-202ENST00000455982 1052 ntTSL 5 BASIC24.63■■□□□ 1.53
RNF103-CHMP3A0A140T963 CAHM-201ENST00000604200 896 ntBASIC24.63■■□□□ 1.53
RNF103-CHMP3A0A140T963 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC24.63■■□□□ 1.53
RNF103-CHMP3A0A140T963 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
RNF103-CHMP3A0A140T963 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
RNF103-CHMP3A0A140T963 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
RNF103-CHMP3A0A140T963 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC24.62■■□□□ 1.53
RNF103-CHMP3A0A140T963 AL121749.1-202ENST00000609313 2153 ntBASIC24.62■■□□□ 1.53
RNF103-CHMP3A0A140T963 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
RNF103-CHMP3A0A140T963 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
RNF103-CHMP3A0A140T963 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
RNF103-CHMP3A0A140T963 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
RNF103-CHMP3A0A140T963 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC24.61■■□□□ 1.53
RNF103-CHMP3A0A140T963 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC24.61■■□□□ 1.53
RNF103-CHMP3A0A140T963 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
RNF103-CHMP3A0A140T963 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC24.6■■□□□ 1.53
RNF103-CHMP3A0A140T963 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC24.6■■□□□ 1.53
RNF103-CHMP3A0A140T963 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
RNF103-CHMP3A0A140T963 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
RNF103-CHMP3A0A140T963 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
RNF103-CHMP3A0A140T963 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
RNF103-CHMP3A0A140T963 AL139393.2-201ENST00000608721 2025 ntBASIC24.59■■□□□ 1.53
RNF103-CHMP3A0A140T963 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
RNF103-CHMP3A0A140T963 CREM-210ENST00000374721 2020 ntTSL 5 BASIC24.58■■□□□ 1.53
RNF103-CHMP3A0A140T963 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
RNF103-CHMP3A0A140T963 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.52
RNF103-CHMP3A0A140T963 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
RNF103-CHMP3A0A140T963 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
RNF103-CHMP3A0A140T963 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC24.57■■□□□ 1.52
RNF103-CHMP3A0A140T963 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
RNF103-CHMP3A0A140T963 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
RNF103-CHMP3A0A140T963 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
RNF103-CHMP3A0A140T963 DRD5P2-201ENST00000421395 2012 ntBASIC24.56■■□□□ 1.52
RNF103-CHMP3A0A140T963 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
RNF103-CHMP3A0A140T963 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC24.55■■□□□ 1.52
RNF103-CHMP3A0A140T963 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC24.55■■□□□ 1.52
RNF103-CHMP3A0A140T963 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC24.55■■□□□ 1.52
RNF103-CHMP3A0A140T963 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC24.55■■□□□ 1.52
RNF103-CHMP3A0A140T963 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
RNF103-CHMP3A0A140T963 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC24.54■■□□□ 1.52
RNF103-CHMP3A0A140T963 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC24.54■■□□□ 1.52
RNF103-CHMP3A0A140T963 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
RNF103-CHMP3A0A140T963 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
RNF103-CHMP3A0A140T963 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC24.53■■□□□ 1.52
RNF103-CHMP3A0A140T963 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
RNF103-CHMP3A0A140T963 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
RNF103-CHMP3A0A140T963 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC24.52■■□□□ 1.52
RNF103-CHMP3A0A140T963 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
RNF103-CHMP3A0A140T963 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC24.51■■□□□ 1.51
RNF103-CHMP3A0A140T963 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
RNF103-CHMP3A0A140T963 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC24.51■■□□□ 1.51
RNF103-CHMP3A0A140T963 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC24.51■■□□□ 1.51
RNF103-CHMP3A0A140T963 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC24.49■■□□□ 1.51
RNF103-CHMP3A0A140T963 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC24.49■■□□□ 1.51
RNF103-CHMP3A0A140T963 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC24.49■■□□□ 1.51
RNF103-CHMP3A0A140T963 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC24.49■■□□□ 1.51
RNF103-CHMP3A0A140T963 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
RNF103-CHMP3A0A140T963 AC135731.1-201ENST00000569415 2548 ntBASIC24.49■■□□□ 1.51
RNF103-CHMP3A0A140T963 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
RNF103-CHMP3A0A140T963 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC24.48■■□□□ 1.51
RNF103-CHMP3A0A140T963 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
RNF103-CHMP3A0A140T963 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC24.48■■□□□ 1.51
RNF103-CHMP3A0A140T963 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC24.48■■□□□ 1.51
RNF103-CHMP3A0A140T963 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC24.48■■□□□ 1.51
RNF103-CHMP3A0A140T963 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC24.47■■□□□ 1.51
RNF103-CHMP3A0A140T963 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
RNF103-CHMP3A0A140T963 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC24.47■■□□□ 1.51
RNF103-CHMP3A0A140T963 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
RNF103-CHMP3A0A140T963 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
RNF103-CHMP3A0A140T963 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
RNF103-CHMP3A0A140T963 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
RNF103-CHMP3A0A140T963 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC24.46■■□□□ 1.51
RNF103-CHMP3A0A140T963 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
RNF103-CHMP3A0A140T963 SHF-207ENST00000560540 2062 ntTSL 5 BASIC24.46■■□□□ 1.51
RNF103-CHMP3A0A140T963 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC24.45■■□□□ 1.51
RNF103-CHMP3A0A140T963 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC24.45■■□□□ 1.5
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms