Protein–RNA interactions for Protein: A0A0U1RRI6

CENPVL3, Centromere protein V-like 3, humanhuman

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPVL3A0A0U1RRI6 LINC00273-201ENST00000539813 1452 ntBASIC21.18■□□□□ 0.98
CENPVL3A0A0U1RRI6 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CENPVL3A0A0U1RRI6 MIR639-201ENST00000384974 98 ntBASIC21.17■□□□□ 0.98
CENPVL3A0A0U1RRI6 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CENPVL3A0A0U1RRI6 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC21.17■□□□□ 0.98
CENPVL3A0A0U1RRI6 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC21.17■□□□□ 0.98
CENPVL3A0A0U1RRI6 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CENPVL3A0A0U1RRI6 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CENPVL3A0A0U1RRI6 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CENPVL3A0A0U1RRI6 AC127502.1-201ENST00000399971 1502 ntBASIC21.16■□□□□ 0.98
CENPVL3A0A0U1RRI6 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC21.16■□□□□ 0.98
CENPVL3A0A0U1RRI6 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CENPVL3A0A0U1RRI6 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CENPVL3A0A0U1RRI6 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC21.16■□□□□ 0.98
CENPVL3A0A0U1RRI6 DUX4L13-201ENST00000554103 1267 ntBASIC21.16■□□□□ 0.98
CENPVL3A0A0U1RRI6 DUX4L15-201ENST00000611059 1267 ntBASIC21.16■□□□□ 0.98
CENPVL3A0A0U1RRI6 DUX4L23-201ENST00000615195 1269 ntBASIC21.16■□□□□ 0.98
CENPVL3A0A0U1RRI6 DUX4L24-201ENST00000617576 1269 ntBASIC21.16■□□□□ 0.98
CENPVL3A0A0U1RRI6 DUX4L22-201ENST00000618238 1269 ntBASIC21.16■□□□□ 0.98
CENPVL3A0A0U1RRI6 DUX4L20-201ENST00000619712 1269 ntBASIC21.16■□□□□ 0.98
CENPVL3A0A0U1RRI6 DUX4L21-201ENST00000622058 1269 ntBASIC21.16■□□□□ 0.98
CENPVL3A0A0U1RRI6 DUX4L10-201ENST00000622460 1267 ntBASIC21.16■□□□□ 0.98
CENPVL3A0A0U1RRI6 DUX4L25-201ENST00000624915 1269 ntBASIC21.16■□□□□ 0.98
CENPVL3A0A0U1RRI6 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC21.16■□□□□ 0.98
CENPVL3A0A0U1RRI6 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
CENPVL3A0A0U1RRI6 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CENPVL3A0A0U1RRI6 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CENPVL3A0A0U1RRI6 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CENPVL3A0A0U1RRI6 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC21.15■□□□□ 0.98
CENPVL3A0A0U1RRI6 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.98
CENPVL3A0A0U1RRI6 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC21.14■□□□□ 0.98
CENPVL3A0A0U1RRI6 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC21.14■□□□□ 0.98
CENPVL3A0A0U1RRI6 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
CENPVL3A0A0U1RRI6 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CENPVL3A0A0U1RRI6 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
CENPVL3A0A0U1RRI6 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CENPVL3A0A0U1RRI6 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CENPVL3A0A0U1RRI6 CHML-204ENST00000638121 920 ntTSL 2 BASIC21.13■□□□□ 0.97
CENPVL3A0A0U1RRI6 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CENPVL3A0A0U1RRI6 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CENPVL3A0A0U1RRI6 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CENPVL3A0A0U1RRI6 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
CENPVL3A0A0U1RRI6 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CENPVL3A0A0U1RRI6 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC21.11■□□□□ 0.97
CENPVL3A0A0U1RRI6 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
CENPVL3A0A0U1RRI6 MIR4449-201ENST00000578365 66 ntBASIC21.1■□□□□ 0.97
CENPVL3A0A0U1RRI6 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
CENPVL3A0A0U1RRI6 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
CENPVL3A0A0U1RRI6 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CENPVL3A0A0U1RRI6 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC21.09■□□□□ 0.97
CENPVL3A0A0U1RRI6 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CENPVL3A0A0U1RRI6 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CENPVL3A0A0U1RRI6 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC21.08■□□□□ 0.97
CENPVL3A0A0U1RRI6 ST7-205ENST00000393446 2114 ntTSL 5 BASIC21.08■□□□□ 0.96
CENPVL3A0A0U1RRI6 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
CENPVL3A0A0U1RRI6 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
CENPVL3A0A0U1RRI6 HES6-205ENST00000409356 528 ntTSL 2 BASIC21.07■□□□□ 0.96
CENPVL3A0A0U1RRI6 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC21.07■□□□□ 0.96
CENPVL3A0A0U1RRI6 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
CENPVL3A0A0U1RRI6 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CENPVL3A0A0U1RRI6 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
CENPVL3A0A0U1RRI6 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
CENPVL3A0A0U1RRI6 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
CENPVL3A0A0U1RRI6 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CENPVL3A0A0U1RRI6 ST7-AS1-201ENST00000456775 1889 ntBASIC21.05■□□□□ 0.96
CENPVL3A0A0U1RRI6 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CENPVL3A0A0U1RRI6 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC21.04■□□□□ 0.96
CENPVL3A0A0U1RRI6 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC21.04■□□□□ 0.96
CENPVL3A0A0U1RRI6 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
CENPVL3A0A0U1RRI6 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CENPVL3A0A0U1RRI6 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CENPVL3A0A0U1RRI6 AC135983.2-203ENST00000454486 1613 ntBASIC21.02■□□□□ 0.96
CENPVL3A0A0U1RRI6 METRNL-202ENST00000570778 967 ntTSL 5 BASIC21.01■□□□□ 0.95
CENPVL3A0A0U1RRI6 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
CENPVL3A0A0U1RRI6 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC21.01■□□□□ 0.95
CENPVL3A0A0U1RRI6 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC21.01■□□□□ 0.95
CENPVL3A0A0U1RRI6 WHAMMP2-203ENST00000563942 1603 ntBASIC21■□□□□ 0.95
CENPVL3A0A0U1RRI6 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CENPVL3A0A0U1RRI6 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CENPVL3A0A0U1RRI6 CHST11-202ENST00000546689 756 ntTSL 2 BASIC21■□□□□ 0.95
CENPVL3A0A0U1RRI6 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
CENPVL3A0A0U1RRI6 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CENPVL3A0A0U1RRI6 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CENPVL3A0A0U1RRI6 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
CENPVL3A0A0U1RRI6 ST7-202ENST00000323984 2142 ntTSL 5 BASIC20.99■□□□□ 0.95
CENPVL3A0A0U1RRI6 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CENPVL3A0A0U1RRI6 ST7-207ENST00000393449 2127 ntTSL 5 BASIC20.99■□□□□ 0.95
CENPVL3A0A0U1RRI6 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CENPVL3A0A0U1RRI6 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CENPVL3A0A0U1RRI6 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CENPVL3A0A0U1RRI6 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC20.98■□□□□ 0.95
CENPVL3A0A0U1RRI6 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CENPVL3A0A0U1RRI6 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CENPVL3A0A0U1RRI6 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
CENPVL3A0A0U1RRI6 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CENPVL3A0A0U1RRI6 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC20.97■□□□□ 0.95
CENPVL3A0A0U1RRI6 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CENPVL3A0A0U1RRI6 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CENPVL3A0A0U1RRI6 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
CENPVL3A0A0U1RRI6 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 10.3 ms