Protein–RNA interactions for Protein: P48016

ATH1, Vacuolar acid trehalase, yeastyeast

Predictions only

Length 1,211 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
ATH1P48016 ARP8YOR141C 2646 nt2.56□□□□□ -2
ATH1P48016 YPL060C-AYPL060C-A 3315 nt2.56□□□□□ -2
ATH1P48016 PSD2YGR170W 3417 nt2.56□□□□□ -2
ATH1P48016 AI1Q0050 2505 nt2.56□□□□□ -2
ATH1P48016 SKI7YOR076C 2244 nt2.56□□□□□ -2
ATH1P48016 CDC25YLR310C 4770 nt2.54□□□□□ -2
ATH1P48016 RPL41AYDL184C 78 nt2.54□□□□□ -2
ATH1P48016 snR38snR38 95 nt2.54□□□□□ -2
ATH1P48016 TFC3YAL001C 3483 nt2.54□□□□□ -2
ATH1P48016 YDL159C-BYDL159C-B 177 nt2.53□□□□□ -2
ATH1P48016 KOG1YHR186C 4674 nt2.52□□□□□ -2.01
ATH1P48016 YPR160W-AYPR160W-A 81 nt2.52□□□□□ -2.01
ATH1P48016 PET127YOR017W 2403 nt2.52□□□□□ -2.01
ATH1P48016 TRA1YHR099W 11235 nt2.52□□□□□ -2.01
ATH1P48016 PDR1YGL013C 3207 nt2.51□□□□□ -2.01
ATH1P48016 KAP122YGL016W 3246 nt2.51□□□□□ -2.01
ATH1P48016 snR14snR14 160 nt2.51□□□□□ -2.01
ATH1P48016 YBR296C-AYBR296C-A 120 nt2.51□□□□□ -2.01
ATH1P48016 EST1YLR233C 2100 nt2.51□□□□□ -2.01
ATH1P48016 KCS1YDR017C 3153 nt2.5□□□□□ -2.01
ATH1P48016 STH1YIL126W 4080 nt2.5□□□□□ -2.01
ATH1P48016 NST1YNL091W 3723 nt2.5□□□□□ -2.01
ATH1P48016 AXL1YPR122W 3627 nt2.49□□□□□ -2.01
ATH1P48016 YHR180C-BYHR180C-B 105 nt2.49□□□□□ -2.01
ATH1P48016 BEM3YPL115C 3387 nt2.49□□□□□ -2.01
ATH1P48016 YLR419WYLR419W 4308 nt2.49□□□□□ -2.01
ATH1P48016 ULP2YIL031W 3105 nt2.48□□□□□ -2.01
ATH1P48016 SEC3YER008C 4011 nt2.48□□□□□ -2.01
ATH1P48016 YGR122C-AYGR122C-A 129 nt2.48□□□□□ -2.01
ATH1P48016 YML054C-AYML054C-A 159 nt2.48□□□□□ -2.01
ATH1P48016 PDR11YIL013C 4236 nt2.47□□□□□ -2.01
ATH1P48016 NIP1YMR309C 2439 nt2.47□□□□□ -2.01
ATH1P48016 STO1YMR125W 2586 nt2.47□□□□□ -2.01
ATH1P48016 SPF1YEL031W 3648 nt2.47□□□□□ -2.01
ATH1P48016 snR69snR69 101 nt2.45□□□□□ -2.02
ATH1P48016 SEC8YPR055W 3198 nt2.45□□□□□ -2.02
ATH1P48016 MSH3YCR092C 3057 nt2.42□□□□□ -2.02
ATH1P48016 YSP1YHR155W 3687 nt2.42□□□□□ -2.02
ATH1P48016 IRC20YLR247C 4671 nt2.41□□□□□ -2.02
ATH1P48016 HER1YOR227W 3741 nt2.4□□□□□ -2.03
ATH1P48016 MSN5YDR335W 3675 nt2.39□□□□□ -2.03
ATH1P48016 tN(GUU)QtN(GUU)Q 71 nt2.39□□□□□ -2.03
ATH1P48016 RDS3YPR094W 324 nt2.39□□□□□ -2.03
ATH1P48016 SKI3YPR189W 4299 nt2.38□□□□□ -2.03
ATH1P48016 UBR2YLR024C 5619 nt2.38□□□□□ -2.03
ATH1P48016 SMC4YLR086W 4257 nt2.38□□□□□ -2.03
ATH1P48016 PRP16YKR086W 3216 nt2.38□□□□□ -2.03
ATH1P48016 YLR399W-AYLR399W-A 105 nt2.37□□□□□ -2.03
ATH1P48016 CSE1YGL238W 2883 nt2.36□□□□□ -2.03
ATH1P48016 UTP22YGR090W 3714 nt2.35□□□□□ -2.03
ATH1P48016 YOR055WYOR055W 435 nt2.35□□□□□ -2.03
ATH1P48016 MSB1YOR188W 3414 nt2.35□□□□□ -2.03
ATH1P48016 CSF1YLR087C 8877 nt2.34□□□□□ -2.03
ATH1P48016 TOR1YJR066W 7413 nt2.34□□□□□ -2.04
ATH1P48016 GEA2YEL022W 4380 nt2.33□□□□□ -2.04
ATH1P48016 INO80YGL150C 4470 nt2.33□□□□□ -2.04
ATH1P48016 SEC31YDL195W 3822 nt2.33□□□□□ -2.04
ATH1P48016 SCD5YOR329C 2619 nt2.33□□□□□ -2.04
ATH1P48016 SXM1YDR395W 2835 nt2.32□□□□□ -2.04
ATH1P48016 YHR180W-AYHR180W-A 183 nt2.3□□□□□ -2.04
ATH1P48016 VPS13YLL040C 9435 nt2.29□□□□□ -2.04
ATH1P48016 IRA2YOL081W 9240 nt2.29□□□□□ -2.04
ATH1P48016 UBP2YOR124C 3819 nt2.29□□□□□ -2.04
ATH1P48016 MYO4YAL029C 4416 nt2.29□□□□□ -2.04
ATH1P48016 YOL098CYOL098C 3114 nt2.28□□□□□ -2.04
ATH1P48016 BNI1YNL271C 5862 nt2.28□□□□□ -2.04
ATH1P48016 ATG9YDL149W 2994 nt2.27□□□□□ -2.05
ATH1P48016 APL3YBL037W 3078 nt2.27□□□□□ -2.05
ATH1P48016 SEC16YPL085W 6588 nt2.27□□□□□ -2.05
ATH1P48016 SWI4YER111C 3282 nt2.26□□□□□ -2.05
ATH1P48016 DNF1YER166W 4716 nt2.24□□□□□ -2.05
ATH1P48016 PET111YMR257C 2403 nt2.22□□□□□ -2.05
ATH1P48016 YJL077W-AYJL077W-A 87 nt2.22□□□□□ -2.05
ATH1P48016 TRM732YMR259C 4263 nt2.2□□□□□ -2.06
ATH1P48016 HUG1YML058W-A 207 nt2.2□□□□□ -2.06
ATH1P48016 NUP145YGL092W 3954 nt2.19□□□□□ -2.06
ATH1P48016 USO1YDL058W 5373 nt2.18□□□□□ -2.06
ATH1P48016 FAB1YFR019W 6837 nt2.17□□□□□ -2.06
ATH1P48016 EST2YLR318W 2655 nt2.17□□□□□ -2.06
ATH1P48016 PAU12YGR294W 363 nt2.16□□□□□ -2.06
ATH1P48016 SIP4YJL089W 2490 nt2.15□□□□□ -2.06
ATH1P48016 BUL2YML111W 2763 nt2.14□□□□□ -2.07
ATH1P48016 BPH1YCR032W 6504 nt2.13□□□□□ -2.07
ATH1P48016 CAT8YMR280C 4302 nt2.12□□□□□ -2.07
ATH1P48016 TOR2YKL203C 7425 nt2.11□□□□□ -2.07
ATH1P48016 MON2YNL297C 4911 nt2.08□□□□□ -2.08
ATH1P48016 PEP1YBL017C 4740 nt2.07□□□□□ -2.08
ATH1P48016 CLU1YMR012W 3834 nt2.06□□□□□ -2.08
ATH1P48016 tQ(UUG)QtQ(UUG)Q 76 nt2.04□□□□□ -2.08
ATH1P48016 NUP188YML103C 4968 nt2.03□□□□□ -2.08
ATH1P48016 YLL006W-AYLL006W-A 177 nt2.03□□□□□ -2.08
ATH1P48016 CDC39YCR093W 6327 nt2.03□□□□□ -2.09
ATH1P48016 DGR1YNL130C-A 147 nt2.02□□□□□ -2.09
ATH1P48016 FYV8YGR196C 2454 nt2.01□□□□□ -2.09
ATH1P48016 SPP41YDR464W 4308 nt2□□□□□ -2.09
ATH1P48016 PMD1YER132C 5262 nt2□□□□□ -2.09
ATH1P48016 NEO1YIL048W 3456 nt1.98□□□□□ -2.09
ATH1P48016 YER090C-AYER090C-A 90 nt1.98□□□□□ -2.09
ATH1P48016 TMA7YLR262C-A 195 nt1.98□□□□□ -2.09
ATH1P48016 NUP192YJL039C 5052 nt1.98□□□□□ -2.09
Retrieved 100 of 7,029 protein–RNA pairs in 65.7 ms