Protein–RNA interactions for Protein: P13500

CCL2, C-C motif chemokine 2, humanhuman

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL2P13500 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC17.41■□□□□ 0.38
CCL2P13500 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC17.41■□□□□ 0.38
CCL2P13500 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
CCL2P13500 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CCL2P13500 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CCL2P13500 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CCL2P13500 AC092368.3-202ENST00000574180 1591 ntBASIC17.41■□□□□ 0.38
CCL2P13500 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CCL2P13500 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CCL2P13500 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC17.41■□□□□ 0.38
CCL2P13500 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CCL2P13500 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
CCL2P13500 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CCL2P13500 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
CCL2P13500 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC17.41■□□□□ 0.38
CCL2P13500 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
CCL2P13500 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CCL2P13500 USP39-204ENST00000409766 2033 ntTSL 2 BASIC17.41■□□□□ 0.38
CCL2P13500 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC17.41■□□□□ 0.38
CCL2P13500 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
CCL2P13500 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC17.41■□□□□ 0.38
CCL2P13500 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CCL2P13500 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
CCL2P13500 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CCL2P13500 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC17.4■□□□□ 0.38
CCL2P13500 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CCL2P13500 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC17.4■□□□□ 0.38
CCL2P13500 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CCL2P13500 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC17.4■□□□□ 0.38
CCL2P13500 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC17.4■□□□□ 0.38
CCL2P13500 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC17.4■□□□□ 0.38
CCL2P13500 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CCL2P13500 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CCL2P13500 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CCL2P13500 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC17.4■□□□□ 0.38
CCL2P13500 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC17.4■□□□□ 0.38
CCL2P13500 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC17.4■□□□□ 0.38
CCL2P13500 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
CCL2P13500 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC17.4■□□□□ 0.38
CCL2P13500 KRT18P6-201ENST00000555540 1265 ntBASIC17.4■□□□□ 0.38
CCL2P13500 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC17.4■□□□□ 0.38
CCL2P13500 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CCL2P13500 INO80E-214ENST00000620599 515 ntTSL 2 BASIC17.4■□□□□ 0.38
CCL2P13500 AC006557.6-201ENST00000623071 864 ntBASIC17.4■□□□□ 0.38
CCL2P13500 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CCL2P13500 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
CCL2P13500 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC17.4■□□□□ 0.38
CCL2P13500 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC17.4■□□□□ 0.38
CCL2P13500 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CCL2P13500 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CCL2P13500 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
CCL2P13500 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
CCL2P13500 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CCL2P13500 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CCL2P13500 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
CCL2P13500 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
CCL2P13500 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
CCL2P13500 KRT8P17-201ENST00000453110 1448 ntBASIC17.39■□□□□ 0.38
CCL2P13500 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CCL2P13500 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CCL2P13500 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC17.39■□□□□ 0.37
CCL2P13500 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CCL2P13500 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC17.39■□□□□ 0.37
CCL2P13500 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CCL2P13500 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CCL2P13500 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CCL2P13500 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC17.39■□□□□ 0.37
CCL2P13500 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CCL2P13500 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC17.39■□□□□ 0.37
CCL2P13500 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CCL2P13500 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CCL2P13500 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC17.39■□□□□ 0.37
CCL2P13500 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CCL2P13500 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC17.39■□□□□ 0.37
CCL2P13500 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CCL2P13500 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
CCL2P13500 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
CCL2P13500 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC17.39■□□□□ 0.37
CCL2P13500 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CCL2P13500 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CCL2P13500 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
CCL2P13500 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC17.39■□□□□ 0.37
CCL2P13500 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CCL2P13500 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CCL2P13500 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
CCL2P13500 KRT8P20-201ENST00000423953 1409 ntBASIC17.38■□□□□ 0.37
CCL2P13500 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CCL2P13500 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CCL2P13500 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC17.38■□□□□ 0.37
CCL2P13500 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CCL2P13500 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC17.38■□□□□ 0.37
CCL2P13500 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC17.38■□□□□ 0.37
CCL2P13500 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
CCL2P13500 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC17.38■□□□□ 0.37
CCL2P13500 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CCL2P13500 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC17.38■□□□□ 0.37
CCL2P13500 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CCL2P13500 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC17.38■□□□□ 0.37
CCL2P13500 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC17.38■□□□□ 0.37
CCL2P13500 PNMA6B-201ENST00000538162 1200 ntBASIC17.38■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 155.1 ms