Protein–RNA interactions for Protein: Q9BRG1

VPS25, Vacuolar protein-sorting-associated protein 25, humanhuman

Predictions only

Length 176 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25Q9BRG1 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC14.02□□□□□ -0.17
VPS25Q9BRG1 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
VPS25Q9BRG1 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC14.02□□□□□ -0.17
VPS25Q9BRG1 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
VPS25Q9BRG1 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC14.02□□□□□ -0.17
VPS25Q9BRG1 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
VPS25Q9BRG1 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
VPS25Q9BRG1 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
VPS25Q9BRG1 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC14.02□□□□□ -0.17
VPS25Q9BRG1 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
VPS25Q9BRG1 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC14.02□□□□□ -0.17
VPS25Q9BRG1 H19-210ENST00000439725 1929 ntTSL 2 BASIC14.02□□□□□ -0.17
VPS25Q9BRG1 DSEL-201ENST00000310045 9531 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
VPS25Q9BRG1 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC14.01□□□□□ -0.17
VPS25Q9BRG1 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
VPS25Q9BRG1 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
VPS25Q9BRG1 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC14.01□□□□□ -0.17
VPS25Q9BRG1 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
VPS25Q9BRG1 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC14.01□□□□□ -0.17
VPS25Q9BRG1 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
VPS25Q9BRG1 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
VPS25Q9BRG1 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
VPS25Q9BRG1 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC14.01□□□□□ -0.17
VPS25Q9BRG1 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC14.01□□□□□ -0.17
VPS25Q9BRG1 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
VPS25Q9BRG1 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
VPS25Q9BRG1 CIB2-204ENST00000557846 934 ntTSL 3 BASIC14.01□□□□□ -0.17
VPS25Q9BRG1 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
VPS25Q9BRG1 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC14.01□□□□□ -0.17
VPS25Q9BRG1 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
VPS25Q9BRG1 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC14.01□□□□□ -0.17
VPS25Q9BRG1 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC14.01□□□□□ -0.17
VPS25Q9BRG1 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC14.01□□□□□ -0.17
VPS25Q9BRG1 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
VPS25Q9BRG1 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
VPS25Q9BRG1 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
VPS25Q9BRG1 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC14.01□□□□□ -0.17
VPS25Q9BRG1 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
VPS25Q9BRG1 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
VPS25Q9BRG1 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
VPS25Q9BRG1 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC14□□□□□ -0.17
VPS25Q9BRG1 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
VPS25Q9BRG1 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
VPS25Q9BRG1 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
VPS25Q9BRG1 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC14□□□□□ -0.17
VPS25Q9BRG1 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
VPS25Q9BRG1 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC14□□□□□ -0.17
VPS25Q9BRG1 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC14□□□□□ -0.17
VPS25Q9BRG1 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC14□□□□□ -0.17
VPS25Q9BRG1 RPS2-210ENST00000530225 765 ntTSL 2 BASIC14□□□□□ -0.17
VPS25Q9BRG1 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC14□□□□□ -0.17
VPS25Q9BRG1 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
VPS25Q9BRG1 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC14□□□□□ -0.17
VPS25Q9BRG1 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC14□□□□□ -0.17
VPS25Q9BRG1 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
VPS25Q9BRG1 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC14□□□□□ -0.17
VPS25Q9BRG1 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC14□□□□□ -0.17
VPS25Q9BRG1 AL359504.2-201ENST00000605506 1601 ntBASIC14□□□□□ -0.17
VPS25Q9BRG1 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC14□□□□□ -0.17
VPS25Q9BRG1 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
VPS25Q9BRG1 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC14□□□□□ -0.17
VPS25Q9BRG1 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC14□□□□□ -0.17
VPS25Q9BRG1 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
VPS25Q9BRG1 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
VPS25Q9BRG1 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
VPS25Q9BRG1 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC14□□□□□ -0.17
VPS25Q9BRG1 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC13.99□□□□□ -0.17
VPS25Q9BRG1 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
VPS25Q9BRG1 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
VPS25Q9BRG1 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC13.99□□□□□ -0.17
VPS25Q9BRG1 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
VPS25Q9BRG1 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
VPS25Q9BRG1 AC073314.1-201ENST00000568729 2216 ntBASIC13.99□□□□□ -0.17
VPS25Q9BRG1 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
VPS25Q9BRG1 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
VPS25Q9BRG1 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
VPS25Q9BRG1 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
VPS25Q9BRG1 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
VPS25Q9BRG1 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
VPS25Q9BRG1 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
VPS25Q9BRG1 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC13.99□□□□□ -0.17
VPS25Q9BRG1 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
VPS25Q9BRG1 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC13.99□□□□□ -0.17
VPS25Q9BRG1 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC13.99□□□□□ -0.17
VPS25Q9BRG1 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
VPS25Q9BRG1 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
VPS25Q9BRG1 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC13.99□□□□□ -0.17
VPS25Q9BRG1 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
VPS25Q9BRG1 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
VPS25Q9BRG1 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC13.99□□□□□ -0.17
VPS25Q9BRG1 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC13.99□□□□□ -0.17
VPS25Q9BRG1 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
VPS25Q9BRG1 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC13.99□□□□□ -0.17
VPS25Q9BRG1 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC13.99□□□□□ -0.17
VPS25Q9BRG1 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
VPS25Q9BRG1 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
VPS25Q9BRG1 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
VPS25Q9BRG1 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
VPS25Q9BRG1 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
VPS25Q9BRG1 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 71 ms