RNA–Protein interactions for RNA: ENST00000621189.4

RECQL4-210, Transcript of RecQ like helicase 4, humanhuman

TSL 1 (best) BASIC

Gene RECQL4, Length 3,896 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RECQL4-210ENST00000621189 NISCHQ9Y2I1 1504 aa30.83■■■□□ 2.53
RECQL4-210ENST00000621189 DCAF8L2P0C7V8 631 aa29.12■■■□□ 2.25
RECQL4-210ENST00000621189 SHROOM4Q9ULL8 1493 aa29■■■□□ 2.23
RECQL4-210ENST00000621189 SUPT5HO00267 1087 aaKnown RBP28.95■■■□□ 2.22
RECQL4-210ENST00000621189 EHMT2Q96KQ7 1210 aa27.68■■■□□ 2.02
RECQL4-210ENST00000621189 PCGF6Q9BYE7 350 aa27.54■■■□□ 2
RECQL4-210ENST00000621189 FAM9AQ8IZU1 332 aaPredicted RBP27.14■■□□□ 1.93
RECQL4-210ENST00000621189 CHIC1Q5VXU3 224 aa26.92■■□□□ 1.9
RECQL4-210ENST00000621189 LOC105371045A0A1W2PR82 267 aa26.91■■□□□ 1.9
RECQL4-210ENST00000621189 PPARGC1BQ86YN6 1023 aaKnown RBP26.87■■□□□ 1.89
RECQL4-210ENST00000621189 HRCP23327 699 aa26.73■■□□□ 1.87
RECQL4-210ENST00000621189 TTBK1Q5TCY1 1321 aaPredicted RBP26.72■■□□□ 1.87
RECQL4-210ENST00000621189 TRIM41Q8WV44 630 aa26.47■■□□□ 1.83
RECQL4-210ENST00000621189 TRIM26Q12899 539 aaPredicted RBP26.15■■□□□ 1.78
RECQL4-210ENST00000621189 MYO15BQ96JP2 1530 aa26.11■■□□□ 1.77
RECQL4-210ENST00000621189 RANGAP1P46060 587 aaPredicted RBP26■■□□□ 1.75
RECQL4-210ENST00000621189 CCER1Q8TC90 406 aaPredicted RBP25.98■■□□□ 1.75
RECQL4-210ENST00000621189 ZCCHC6Q5VYS8 1495 aaKnown RBP25.81■■□□□ 1.72
RECQL4-210ENST00000621189 ZEB1P37275 1124 aaPredicted RBP25.78■■□□□ 1.72
RECQL4-210ENST00000621189 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.74■■□□□ 1.71
RECQL4-210ENST00000621189 UBTFP17480 764 aaKnown RBP25.67■■□□□ 1.7
RECQL4-210ENST00000621189 YTHDC1Q96MU7 727 aaKnown RBP25.63■■□□□ 1.69
RECQL4-210ENST00000621189 APLP2Q06481 763 aa25.47■■□□□ 1.67
RECQL4-210ENST00000621189 ABCC9O60706 1549 aa25.34■■□□□ 1.65
RECQL4-210ENST00000621189 HNRNPUL2Q1KMD3 747 aaKnown RBP25.33■■□□□ 1.64
RECQL4-210ENST00000621189 CENPBP07199 599 aaPredicted RBP25.31■■□□□ 1.64
RECQL4-210ENST00000621189 DCAF1Q9Y4B6 1507 aa25.21■■□□□ 1.63
RECQL4-210ENST00000621189 PELP1Q8IZL8 1130 aaKnown RBP25.18■■□□□ 1.62
RECQL4-210ENST00000621189 DIEXFQ68CQ4 756 aaKnown RBP25.15■■□□□ 1.62
RECQL4-210ENST00000621189 SCRIBQ14160 1630 aa25.15■■□□□ 1.62
RECQL4-210ENST00000621189 PABPN1Q86U42 306 aaKnown RBP eCLIP25.08■■□□□ 1.611e-7■■■■■ 44.2
RECQL4-210ENST00000621189 CCDC180Q9P1Z9 1646 aa25.03■■□□□ 1.6
RECQL4-210ENST00000621189 ITGAEP38570 1179 aa25.02■■□□□ 1.6
RECQL4-210ENST00000621189 ATP1B4Q9UN42 357 aaPredicted RBP25■■□□□ 1.59
RECQL4-210ENST00000621189 GTF3C3Q9Y5Q9 886 aa24.98■■□□□ 1.59
RECQL4-210ENST00000621189 SCAF1Q9H7N4 1312 aaKnown RBP24.96■■□□□ 1.59
RECQL4-210ENST00000621189 RSF1Q96T23 1441 aaPredicted RBP24.91■■□□□ 1.58
RECQL4-210ENST00000621189 NEUROD1Q13562 356 aa24.81■■□□□ 1.56
RECQL4-210ENST00000621189 ACIN1Q9UKV3 1341 aaKnown RBP24.76■■□□□ 1.55
RECQL4-210ENST00000621189 CSRNP3Q8WYN3 585 aa24.65■■□□□ 1.54
RECQL4-210ENST00000621189 CECR2Q9BXF3 1484 aa24.61■■□□□ 1.53
RECQL4-210ENST00000621189 ZNF316A6NFI3 1004 aaPredicted RBP24.58■■□□□ 1.53
RECQL4-210ENST00000621189 RB1CC1Q8TDY2 1594 aa24.53■■□□□ 1.52
RECQL4-210ENST00000621189 MIER1Q8N108 512 aa24.37■■□□□ 1.49
RECQL4-210ENST00000621189 BCANQ96GW7 911 aa24.36■■□□□ 1.49
RECQL4-210ENST00000621189 CNGB1Q14028 1251 aaPredicted RBP24.3■■□□□ 1.48
RECQL4-210ENST00000621189 MROH2BQ7Z745 1585 aa24.25■■□□□ 1.47
RECQL4-210ENST00000621189 CEP162Q5TB80 1403 aa24.25■■□□□ 1.47
RECQL4-210ENST00000621189 FAM50AQ14320 339 aaKnown RBP24.25■■□□□ 1.47
RECQL4-210ENST00000621189 P3H3Q8IVL6 736 aa24.23■■□□□ 1.47
RECQL4-210ENST00000621189 SOGA1O94964 1423 aa24.21■■□□□ 1.47
RECQL4-210ENST00000621189 MYT1Q01538 1121 aa24.18■■□□□ 1.46
RECQL4-210ENST00000621189 ABCC8Q09428 1581 aa24.13■■□□□ 1.45
RECQL4-210ENST00000621189 NEFLP07196 543 aa24.12■■□□□ 1.45
RECQL4-210ENST00000621189 CCDC88BA6NC98 1476 aa24.08■■□□□ 1.44
RECQL4-210ENST00000621189 HIRIP3Q9BW71 556 aaPredicted RBP24.04■■□□□ 1.44
RECQL4-210ENST00000621189 WIZO95785 1651 aa24.02■■□□□ 1.44
RECQL4-210ENST00000621189 POLR3GLQ9BT43 218 aa23.99■■□□□ 1.43
RECQL4-210ENST00000621189 CLIP1P30622 1438 aa23.97■■□□□ 1.43
RECQL4-210ENST00000621189 TNIKQ9UKE5 1360 aa23.91■■□□□ 1.42
RECQL4-210ENST00000621189 DDX10Q13206 875 aaKnown RBP23.9■■□□□ 1.42
RECQL4-210ENST00000621189 ARID3CA6NKF2 412 aa23.9■■□□□ 1.42
RECQL4-210ENST00000621189 RUSC2Q8N2Y8 1516 aa23.89■■□□□ 1.42
RECQL4-210ENST00000621189 ERICH6Q7L0X2 663 aa23.88■■□□□ 1.41
RECQL4-210ENST00000621189 WRNQ14191 1432 aaPredicted RBP eCLIP23.85■■□□□ 1.41
RECQL4-210ENST00000621189 GOLGA3Q08378 1498 aa23.81■■□□□ 1.4
RECQL4-210ENST00000621189 NACADO15069 1562 aa23.8■■□□□ 1.4
RECQL4-210ENST00000621189 TRIM52Q96A61 297 aa23.77■■□□□ 1.4
RECQL4-210ENST00000621189 FKBP8Q14318 412 aa23.74■■□□□ 1.39
RECQL4-210ENST00000621189 BAZ1AQ9NRL2 1556 aaPredicted RBP23.74■■□□□ 1.39
RECQL4-210ENST00000621189 KANK4Q5T7N3 995 aaPredicted RBP23.7■■□□□ 1.39
RECQL4-210ENST00000621189 ANP32CO43423 234 aa23.65■■□□□ 1.38
RECQL4-210ENST00000621189 SIN3AQ96ST3 1273 aa23.64■■□□□ 1.37
RECQL4-210ENST00000621189 EEA1Q15075 1411 aa23.59■■□□□ 1.37
RECQL4-210ENST00000621189 IRX6P78412 446 aaPredicted RBP23.58■■□□□ 1.37
RECQL4-210ENST00000621189 ZNF326Q5BKZ1 582 aaKnown RBP23.56■■□□□ 1.36
RECQL4-210ENST00000621189 CEP164Q9UPV0 1460 aa23.56■■□□□ 1.36
RECQL4-210ENST00000621189 CHIC2Q9UKJ5 165 aa23.54■■□□□ 1.36
RECQL4-210ENST00000621189 SENP3-EIF4A1A0A087X0R7 540 aa23.53■■□□□ 1.36
RECQL4-210ENST00000621189 KCNH8Q96L42 1107 aa23.52■■□□□ 1.36
RECQL4-210ENST00000621189 SUPT16HQ9Y5B9 1047 aaKnown RBP23.48■■□□□ 1.35
RECQL4-210ENST00000621189 BAZ1BQ9UIG0 1483 aaKnown RBP23.44■■□□□ 1.34
RECQL4-210ENST00000621189 HNRNPUQ00839 825 aaKnown RBP eCLIP23.43■■□□□ 1.34
RECQL4-210ENST00000621189 VPS8Q8N3P4 1428 aa23.43■■□□□ 1.34
RECQL4-210ENST00000621189 RAPGEF2Q9Y4G8 1499 aa23.42■■□□□ 1.34
RECQL4-210ENST00000621189 TOP2AP11388 1531 aaKnown RBP23.39■■□□□ 1.33
RECQL4-210ENST00000621189 TONSLQ96HA7 1378 aa23.36■■□□□ 1.33
RECQL4-210ENST00000621189 FAM9BQ8IZU0 186 aa23.34■■□□□ 1.33
RECQL4-210ENST00000621189 RRP7BPQ9NSQ0 103 aa23.32■■□□□ 1.32
RECQL4-210ENST00000621189 CCNB3Q8WWL7 1395 aa23.26■■□□□ 1.31
RECQL4-210ENST00000621189 SMARCA2P51531 1590 aa23.25■■□□□ 1.31
RECQL4-210ENST00000621189 SMARCA4P51532 1647 aa23.25■■□□□ 1.31
RECQL4-210ENST00000621189 FBLN2P98095 1184 aa23.24■■□□□ 1.31
RECQL4-210ENST00000621189 ZNF777Q9ULD5 760 aaPredicted RBP23.23■■□□□ 1.31
RECQL4-210ENST00000621189 CDK11AQ9UQ88 783 aaPredicted RBP23.23■■□□□ 1.31
RECQL4-210ENST00000621189 KIF27Q86VH2 1401 aa23.21■■□□□ 1.31
RECQL4-210ENST00000621189 DHX57Q6P158 1386 aaKnown RBP23.2■■□□□ 1.3
RECQL4-210ENST00000621189 SALL2Q9Y467 1007 aaPredicted RBP23.18■■□□□ 1.3
RECQL4-210ENST00000621189 MTUS2Q5JR59 1369 aa23.15■■□□□ 1.3
RECQL4-210ENST00000621189 RAB3GAP2Q9H2M9 1393 aa23.15■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms