Protein–RNA interactions for Protein: Q5SQN1

SNAP47, Synaptosomal-associated protein 47, humanhuman

Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAP47Q5SQN1 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
SNAP47Q5SQN1 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SNAP47Q5SQN1 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SNAP47Q5SQN1 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC19.5■□□□□ 0.71
SNAP47Q5SQN1 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
SNAP47Q5SQN1 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
SNAP47Q5SQN1 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SNAP47Q5SQN1 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SNAP47Q5SQN1 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
SNAP47Q5SQN1 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
SNAP47Q5SQN1 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SNAP47Q5SQN1 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SNAP47Q5SQN1 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC19.49■□□□□ 0.71
SNAP47Q5SQN1 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SNAP47Q5SQN1 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SNAP47Q5SQN1 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SNAP47Q5SQN1 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SNAP47Q5SQN1 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
SNAP47Q5SQN1 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC19.49■□□□□ 0.71
SNAP47Q5SQN1 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC19.49■□□□□ 0.71
SNAP47Q5SQN1 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
SNAP47Q5SQN1 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC19.49■□□□□ 0.71
SNAP47Q5SQN1 AC005829.2-201ENST00000571422 1056 ntBASIC19.49■□□□□ 0.71
SNAP47Q5SQN1 KLF2-202ENST00000592003 564 ntTSL 3 BASIC19.49■□□□□ 0.71
SNAP47Q5SQN1 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC19.49■□□□□ 0.71
SNAP47Q5SQN1 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
SNAP47Q5SQN1 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SNAP47Q5SQN1 MOK-233ENST00000524214 1539 ntTSL 2 BASIC19.49■□□□□ 0.71
SNAP47Q5SQN1 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SNAP47Q5SQN1 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC19.49■□□□□ 0.71
SNAP47Q5SQN1 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
SNAP47Q5SQN1 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC19.48■□□□□ 0.71
SNAP47Q5SQN1 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
SNAP47Q5SQN1 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
SNAP47Q5SQN1 AC121338.2-201ENST00000622535 1744 ntBASIC19.48■□□□□ 0.71
SNAP47Q5SQN1 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
SNAP47Q5SQN1 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
SNAP47Q5SQN1 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
SNAP47Q5SQN1 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SNAP47Q5SQN1 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
SNAP47Q5SQN1 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC19.48■□□□□ 0.71
SNAP47Q5SQN1 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SNAP47Q5SQN1 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
SNAP47Q5SQN1 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SNAP47Q5SQN1 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
SNAP47Q5SQN1 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
SNAP47Q5SQN1 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC19.48■□□□□ 0.71
SNAP47Q5SQN1 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC19.48■□□□□ 0.71
SNAP47Q5SQN1 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SNAP47Q5SQN1 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
SNAP47Q5SQN1 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
SNAP47Q5SQN1 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
SNAP47Q5SQN1 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
SNAP47Q5SQN1 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
SNAP47Q5SQN1 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC19.48■□□□□ 0.71
SNAP47Q5SQN1 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
SNAP47Q5SQN1 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SNAP47Q5SQN1 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC19.48■□□□□ 0.71
SNAP47Q5SQN1 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC19.48■□□□□ 0.71
SNAP47Q5SQN1 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
SNAP47Q5SQN1 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
SNAP47Q5SQN1 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
SNAP47Q5SQN1 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
SNAP47Q5SQN1 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
SNAP47Q5SQN1 AC027702.1-201ENST00000563810 1770 ntBASIC19.47■□□□□ 0.71
SNAP47Q5SQN1 AL049796.1-201ENST00000565336 1766 ntBASIC19.47■□□□□ 0.71
SNAP47Q5SQN1 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SNAP47Q5SQN1 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC19.47■□□□□ 0.71
SNAP47Q5SQN1 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC19.47■□□□□ 0.71
SNAP47Q5SQN1 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SNAP47Q5SQN1 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
SNAP47Q5SQN1 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
SNAP47Q5SQN1 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
SNAP47Q5SQN1 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC19.47■□□□□ 0.71
SNAP47Q5SQN1 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SNAP47Q5SQN1 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SNAP47Q5SQN1 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC19.47■□□□□ 0.71
SNAP47Q5SQN1 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC19.47■□□□□ 0.71
SNAP47Q5SQN1 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC19.47■□□□□ 0.71
SNAP47Q5SQN1 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC19.47■□□□□ 0.71
SNAP47Q5SQN1 AC120498.8-201ENST00000614275 531 ntBASIC19.47■□□□□ 0.71
SNAP47Q5SQN1 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC19.47■□□□□ 0.71
SNAP47Q5SQN1 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
SNAP47Q5SQN1 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SNAP47Q5SQN1 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
SNAP47Q5SQN1 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
SNAP47Q5SQN1 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
SNAP47Q5SQN1 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SNAP47Q5SQN1 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SNAP47Q5SQN1 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC19.46■□□□□ 0.71
SNAP47Q5SQN1 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SNAP47Q5SQN1 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
SNAP47Q5SQN1 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC19.46■□□□□ 0.71
SNAP47Q5SQN1 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC19.46■□□□□ 0.71
SNAP47Q5SQN1 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SNAP47Q5SQN1 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC19.46■□□□□ 0.71
SNAP47Q5SQN1 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SNAP47Q5SQN1 ABHD17AP6-201ENST00000458502 1044 ntBASIC19.46■□□□□ 0.71
SNAP47Q5SQN1 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
SNAP47Q5SQN1 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC19.46■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 57.4 ms