Protein–RNA interactions for Protein: Q08949

DDC1, DNA damage checkpoint protein 1, yeastyeast

Predictions only

Length 612 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
DDC1Q08949 NUP188YML103C 4968 nt1.14□□□□□ -2.23
DDC1Q08949 YAR009CYAR009C 3591 nt1.14□□□□□ -2.23
DDC1Q08949 NPC2YDL046W 522 nt1.13□□□□□ -2.23
DDC1Q08949 NHP2YDL208W 471 nt1.13□□□□□ -2.23
DDC1Q08949 snR14snR14 160 nt1.13□□□□□ -2.23
DDC1Q08949 SCW11YGL028C 1629 nt1.12□□□□□ -2.23
DDC1Q08949 SWI4YER111C 3282 nt1.12□□□□□ -2.23
DDC1Q08949 YDR048CYDR048C 315 nt1.12□□□□□ -2.23
DDC1Q08949 PCC1YKR095W-A 267 nt1.12□□□□□ -2.23
DDC1Q08949 TAR1YLR154W-C 375 nt1.12□□□□□ -2.23
DDC1Q08949 NIP100YPL174C 2607 nt1.12□□□□□ -2.23
DDC1Q08949 YAR029WYAR029W 225 nt1.11□□□□□ -2.23
DDC1Q08949 YBL008W-AYBL008W-A 240 nt1.11□□□□□ -2.23
DDC1Q08949 snR36snR36 182 nt1.11□□□□□ -2.23
DDC1Q08949 SPT21YMR179W 2277 nt1.11□□□□□ -2.23
DDC1Q08949 VAM6YDL077C 3150 nt1.1□□□□□ -2.23
DDC1Q08949 YKL118WYKL118W 312 nt1.1□□□□□ -2.23
DDC1Q08949 YPR063CYPR063C 423 nt1.1□□□□□ -2.23
DDC1Q08949 RAD34YDR314C 2079 nt1.1□□□□□ -2.23
DDC1Q08949 APL1YJR005W 2103 nt1.1□□□□□ -2.23
DDC1Q08949 MPT5YGL178W 2580 nt1.09□□□□□ -2.23
DDC1Q08949 ROM2YLR371W 4071 nt1.09□□□□□ -2.23
DDC1Q08949 YDR413CYDR413C 576 nt1.09□□□□□ -2.23
DDC1Q08949 YFL032WYFL032W 321 nt1.09□□□□□ -2.23
DDC1Q08949 MAM33YIL070C 801 nt1.09□□□□□ -2.23
DDC1Q08949 YJR011CYJR011C 786 nt1.09□□□□□ -2.23
DDC1Q08949 YOR108C-AYOR108C-A 210 nt1.09□□□□□ -2.23
DDC1Q08949 SPT7YBR081C 3999 nt1.08□□□□□ -2.24
DDC1Q08949 APL3YBL037W 3078 nt1.08□□□□□ -2.24
DDC1Q08949 YER097WYER097W 330 nt1.08□□□□□ -2.24
DDC1Q08949 YLL020CYLL020C 306 nt1.08□□□□□ -2.24
DDC1Q08949 ALY2YJL084C 3141 nt1.08□□□□□ -2.24
DDC1Q08949 YDR183C-AYDR183C-A 258 nt1.07□□□□□ -2.24
DDC1Q08949 RPL34BYIL052C 366 nt1.07□□□□□ -2.24
DDC1Q08949 YKL136WYKL136W 399 nt1.07□□□□□ -2.24
DDC1Q08949 SLI15YBR156C 2097 nt1.06□□□□□ -2.24
DDC1Q08949 SEC3YER008C 4011 nt1.05□□□□□ -2.24
DDC1Q08949 LCD1YDR499W 2244 nt1.05□□□□□ -2.24
DDC1Q08949 AIM44YPL158C 2277 nt1.05□□□□□ -2.24
DDC1Q08949 NUP145YGL092W 3954 nt1.05□□□□□ -2.24
DDC1Q08949 SLD3YGL113W 2007 nt1.05□□□□□ -2.24
DDC1Q08949 YFL063WYFL063W 456 nt1.05□□□□□ -2.24
DDC1Q08949 YMR290W-AYMR290W-A 348 nt1.05□□□□□ -2.24
DDC1Q08949 CDC39YCR093W 6327 nt1.05□□□□□ -2.24
DDC1Q08949 EAF1YDR359C 2949 nt1.04□□□□□ -2.24
DDC1Q08949 DBP6YNR038W 1890 nt1.04□□□□□ -2.24
DDC1Q08949 SSS1YDR086C 243 nt1.04□□□□□ -2.24
DDC1Q08949 OST1YJL002C 1431 nt1.04□□□□□ -2.24
DDC1Q08949 YJR029WYJR029W 5268 nt1.04□□□□□ -2.24
DDC1Q08949 YPR137C-BYPR137C-B 5268 nt1.04□□□□□ -2.24
DDC1Q08949 YCK3YER123W 1575 nt1.04□□□□□ -2.24
DDC1Q08949 SET3YKR029C 2256 nt1.03□□□□□ -2.24
DDC1Q08949 STB6YKL072W 2301 nt1.03□□□□□ -2.24
DDC1Q08949 EMT1tM(CAU)D 73 nt1.03□□□□□ -2.24
DDC1Q08949 EMT5tM(CAU)J1 73 nt1.03□□□□□ -2.24
DDC1Q08949 EMT3tM(CAU)J2 73 nt1.03□□□□□ -2.24
DDC1Q08949 EMT4tM(CAU)M 73 nt1.03□□□□□ -2.24
DDC1Q08949 EMT2tM(CAU)O2 73 nt1.03□□□□□ -2.24
DDC1Q08949 MMS4YBR098W 2076 nt1.03□□□□□ -2.25
DDC1Q08949 HTL1YCR020W-B 237 nt1.02□□□□□ -2.25
DDC1Q08949 YDR344CYDR344C 444 nt1.02□□□□□ -2.25
DDC1Q08949 YIL115W-AYIL115W-A 372 nt1.02□□□□□ -2.25
DDC1Q08949 YBR221W-AYBR221W-A 105 nt1.02□□□□□ -2.25
DDC1Q08949 PKH2YOL100W 3246 nt1.01□□□□□ -2.25
DDC1Q08949 STE5YDR103W 2754 nt1.01□□□□□ -2.25
DDC1Q08949 FIG4YNL325C 2640 nt1.01□□□□□ -2.25
DDC1Q08949 STO1YMR125W 2586 nt1□□□□□ -2.25
DDC1Q08949 INA22YIR024C 651 nt1□□□□□ -2.25
DDC1Q08949 YBR206WYBR206W 324 nt1□□□□□ -2.25
DDC1Q08949 PDE2YOR360C 1581 nt1□□□□□ -2.25
DDC1Q08949 IFH1YLR223C 3258 nt0.99□□□□□ -2.25
DDC1Q08949 YDR521WYDR521W 336 nt0.99□□□□□ -2.25
DDC1Q08949 YGL149WYGL149W 306 nt0.99□□□□□ -2.25
DDC1Q08949 YIL032CYIL032C 357 nt0.99□□□□□ -2.25
DDC1Q08949 YIR044CYIR044C 186 nt0.99□□□□□ -2.25
DDC1Q08949 YMR193C-AYMR193C-A 387 nt0.99□□□□□ -2.25
DDC1Q08949 YNL146WYNL146W 303 nt0.99□□□□□ -2.25
DDC1Q08949 YBR200W-AYBR200W-A 165 nt0.99□□□□□ -2.25
DDC1Q08949 YLL007CYLL007C 1998 nt0.99□□□□□ -2.25
DDC1Q08949 YDL206WYDL206W 2289 nt0.99□□□□□ -2.25
DDC1Q08949 CUL3YGR003W 2235 nt0.99□□□□□ -2.25
DDC1Q08949 SCC2YDR180W 4482 nt0.98□□□□□ -2.25
DDC1Q08949 BEM2YER155C 6504 nt0.98□□□□□ -2.25
DDC1Q08949 snR60snR60 104 nt0.98□□□□□ -2.25
DDC1Q08949 PAM16YJL104W 450 nt0.98□□□□□ -2.25
DDC1Q08949 DOP1YDR141C 5097 nt0.98□□□□□ -2.25
DDC1Q08949 BUD3YCL014W 4911 nt0.98□□□□□ -2.25
DDC1Q08949 GPG1YGL121C 381 nt0.97□□□□□ -2.25
DDC1Q08949 YJL120WYJL120W 324 nt0.97□□□□□ -2.25
DDC1Q08949 RPL39YJL189W 156 nt0.97□□□□□ -2.25
DDC1Q08949 YPR010C-AYPR010C-A 219 nt0.97□□□□□ -2.25
DDC1Q08949 PAN2YGL094C 3348 nt0.97□□□□□ -2.25
DDC1Q08949 SPO21YOL091W 1830 nt0.96□□□□□ -2.26
DDC1Q08949 YPR117WYPR117W 7470 nt0.96□□□□□ -2.26
DDC1Q08949 RPS25BYLR333C 327 nt0.96□□□□□ -2.26
DDC1Q08949 YMR031W-AYMR031W-A 327 nt0.96□□□□□ -2.26
DDC1Q08949 RPS30BYOR182C 192 nt0.96□□□□□ -2.26
DDC1Q08949 NUP157YER105C 4176 nt0.96□□□□□ -2.26
DDC1Q08949 PTP2YOR208W 2253 nt0.95□□□□□ -2.26
DDC1Q08949 UTP20YBL004W 7482 nt0.94□□□□□ -2.26
Retrieved 100 of 7,029 protein–RNA pairs in 7.6 ms