Protein–RNA interactions for Protein: P39538

UBP12, Ubiquitin carboxyl-terminal hydrolase 12, yeastyeast

Predictions only

Length 1,254 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
UBP12P39538 MPT5YGL178W 2580 nt1.81□□□□□ -2.12
UBP12P39538 SSS1YDR086C 243 nt1.8□□□□□ -2.12
UBP12P39538 GPG1YGL121C 381 nt1.8□□□□□ -2.12
UBP12P39538 COG8YML071C 1824 nt1.8□□□□□ -2.12
UBP12P39538 MMS4YBR098W 2076 nt1.79□□□□□ -2.12
UBP12P39538 ALY2YJL084C 3141 nt1.79□□□□□ -2.12
UBP12P39538 IFH1YLR223C 3258 nt1.79□□□□□ -2.12
UBP12P39538 FIG2YCR089W 4830 nt1.78□□□□□ -2.12
UBP12P39538 PBY1YBR094W 2262 nt1.78□□□□□ -2.12
UBP12P39538 YJL015CYJL015C 285 nt1.77□□□□□ -2.13
UBP12P39538 YMR321CYMR321C 318 nt1.77□□□□□ -2.13
UBP12P39538 YPR010C-AYPR010C-A 219 nt1.77□□□□□ -2.13
UBP12P39538 AZF1YOR113W 2745 nt1.76□□□□□ -2.13
UBP12P39538 YLR419WYLR419W 4308 nt1.76□□□□□ -2.13
UBP12P39538 VIK1YPL253C 1944 nt1.76□□□□□ -2.13
UBP12P39538 YOR008C-AYOR008C-A 225 nt1.76□□□□□ -2.13
UBP12P39538 EST2YLR318W 2655 nt1.76□□□□□ -2.13
UBP12P39538 VPS15YBR097W 4365 nt1.75□□□□□ -2.13
UBP12P39538 YNL028WYNL028W 318 nt1.75□□□□□ -2.13
UBP12P39538 YOR218CYOR218C 420 nt1.75□□□□□ -2.13
UBP12P39538 PIP2YOR363C 2991 nt1.75□□□□□ -2.13
UBP12P39538 YBL008W-AYBL008W-A 240 nt1.74□□□□□ -2.13
UBP12P39538 CSE2YNR010W 450 nt1.74□□□□□ -2.13
UBP12P39538 RAD61YDR014W 1944 nt1.74□□□□□ -2.13
UBP12P39538 YGR069WYGR069W 336 nt1.73□□□□□ -2.13
UBP12P39538 RPS25BYLR333C 327 nt1.73□□□□□ -2.13
UBP12P39538 CLU1YMR012W 3834 nt1.73□□□□□ -2.13
UBP12P39538 SWI4YER111C 3282 nt1.72□□□□□ -2.13
UBP12P39538 YDL206WYDL206W 2289 nt1.71□□□□□ -2.13
UBP12P39538 PAN2YGL094C 3348 nt1.71□□□□□ -2.14
UBP12P39538 RPS27BYHR021C 249 nt1.71□□□□□ -2.14
UBP12P39538 snR14snR14 160 nt1.71□□□□□ -2.14
UBP12P39538 FIG4YNL325C 2640 nt1.71□□□□□ -2.14
UBP12P39538 SPO75YLL005C 2607 nt1.7□□□□□ -2.14
UBP12P39538 YLR422WYLR422W 5799 nt1.7□□□□□ -2.14
UBP12P39538 PMD1YER132C 5262 nt1.7□□□□□ -2.14
UBP12P39538 YGR109W-BYGR109W-B 4644 nt1.7□□□□□ -2.14
UBP12P39538 YDR521WYDR521W 336 nt1.7□□□□□ -2.14
UBP12P39538 MSN5YDR335W 3675 nt1.7□□□□□ -2.14
UBP12P39538 YBR174CYBR174C 315 nt1.69□□□□□ -2.14
UBP12P39538 SPC110YDR356W 2835 nt1.69□□□□□ -2.14
UBP12P39538 NUP145YGL092W 3954 nt1.69□□□□□ -2.14
UBP12P39538 LAA1YJL207C 6045 nt1.68□□□□□ -2.14
UBP12P39538 INA22YIR024C 651 nt1.68□□□□□ -2.14
UBP12P39538 YJL120WYJL120W 324 nt1.68□□□□□ -2.14
UBP12P39538 SEC3YER008C 4011 nt1.67□□□□□ -2.14
UBP12P39538 YGR130CYGR130C 2451 nt1.67□□□□□ -2.14
UBP12P39538 PDE2YOR360C 1581 nt1.67□□□□□ -2.14
UBP12P39538 SPO21YOL091W 1830 nt1.66□□□□□ -2.14
UBP12P39538 POL5YEL055C 3069 nt1.66□□□□□ -2.14
UBP12P39538 CDC36YDL165W 576 nt1.65□□□□□ -2.15
UBP12P39538 ROM2YLR371W 4071 nt1.65□□□□□ -2.15
UBP12P39538 SET3YKR029C 2256 nt1.64□□□□□ -2.15
UBP12P39538 YCR022CYCR022C 345 nt1.64□□□□□ -2.15
UBP12P39538 STF2YGR008C 255 nt1.64□□□□□ -2.15
UBP12P39538 SMC1YFL008W 3678 nt1.63□□□□□ -2.15
UBP12P39538 YLL020CYLL020C 306 nt1.63□□□□□ -2.15
UBP12P39538 YOR011W-AYOR011W-A 207 nt1.63□□□□□ -2.15
UBP12P39538 IES4YOR189W 351 nt1.63□□□□□ -2.15
UBP12P39538 YOR282WYOR282W 321 nt1.63□□□□□ -2.15
UBP12P39538 YBR221W-AYBR221W-A 105 nt1.63□□□□□ -2.15
UBP12P39538 STO1YMR125W 2586 nt1.63□□□□□ -2.15
UBP12P39538 YAR009CYAR009C 3591 nt1.63□□□□□ -2.15
UBP12P39538 YPL152W-AYPL152W-A 99 nt1.62□□□□□ -2.15
UBP12P39538 YBR200W-AYBR200W-A 165 nt1.62□□□□□ -2.15
UBP12P39538 APL3YBL037W 3078 nt1.62□□□□□ -2.15
UBP12P39538 NUP188YML103C 4968 nt1.61□□□□□ -2.15
UBP12P39538 TRM732YMR259C 4263 nt1.61□□□□□ -2.15
UBP12P39538 CCH1YGR217W 6120 nt1.61□□□□□ -2.15
UBP12P39538 tQ(UUG)E2tQ(UUG)E2 72 nt1.61□□□□□ -2.15
UBP12P39538 HUG1YML058W-A 207 nt1.61□□□□□ -2.15
UBP12P39538 YBR206WYBR206W 324 nt1.61□□□□□ -2.15
UBP12P39538 SLD3YGL113W 2007 nt1.61□□□□□ -2.15
UBP12P39538 MCM10YIL150C 1716 nt1.6□□□□□ -2.15
UBP12P39538 SSK2YNR031C 4740 nt1.59□□□□□ -2.15
UBP12P39538 tH(GUG)E1tH(GUG)E1 72 nt1.59□□□□□ -2.15
UBP12P39538 tH(GUG)E2tH(GUG)E2 72 nt1.59□□□□□ -2.15
UBP12P39538 tH(GUG)G1tH(GUG)G1 72 nt1.59□□□□□ -2.15
UBP12P39538 tH(GUG)G2tH(GUG)G2 72 nt1.59□□□□□ -2.15
UBP12P39538 tH(GUG)HtH(GUG)H 72 nt1.59□□□□□ -2.15
UBP12P39538 tH(GUG)KtH(GUG)K 72 nt1.59□□□□□ -2.15
UBP12P39538 tH(GUG)MtH(GUG)M 72 nt1.59□□□□□ -2.15
UBP12P39538 YHR063W-AYHR063W-A 336 nt1.59□□□□□ -2.15
UBP12P39538 YJL197C-AYJL197C-A 282 nt1.59□□□□□ -2.15
UBP12P39538 YLR120W-AYLR120W-A 102 nt1.59□□□□□ -2.15
UBP12P39538 SEC21YNL287W 2808 nt1.58□□□□□ -2.16
UBP12P39538 IML1YJR138W 4755 nt1.58□□□□□ -2.16
UBP12P39538 YEL020C-BYEL020C-B 198 nt1.58□□□□□ -2.16
UBP12P39538 FYV8YGR196C 2454 nt1.57□□□□□ -2.16
UBP12P39538 WAR1YML076C 2835 nt1.57□□□□□ -2.16
UBP12P39538 RRT15YLR162W-A 189 nt1.57□□□□□ -2.16
UBP12P39538 snR49snR49 165 nt1.57□□□□□ -2.16
UBP12P39538 CDC25YLR310C 4770 nt1.57□□□□□ -2.16
UBP12P39538 YGL052WYGL052W 306 nt1.56□□□□□ -2.16
UBP12P39538 YMR172C-AYMR172C-A 384 nt1.55□□□□□ -2.16
UBP12P39538 PET127YOR017W 2403 nt1.55□□□□□ -2.16
UBP12P39538 HKR1YDR420W 5409 nt1.54□□□□□ -2.16
UBP12P39538 ECM12YHR021W-A 456 nt1.53□□□□□ -2.16
UBP12P39538 RSM22YKL155C 1887 nt1.53□□□□□ -2.16
UBP12P39538 YOR015WYOR015W 360 nt1.53□□□□□ -2.16
Retrieved 100 of 7,029 protein–RNA pairs in 10.4 ms