Protein–RNA interactions for Protein: P36026

UBP11, Ubiquitin carboxyl-terminal hydrolase 11, yeastyeast

Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
UBP11P36026 snR65snR65 100 nt1.45□□□□□ -2.18
UBP11P36026 YMR193C-AYMR193C-A 387 nt1.45□□□□□ -2.18
UBP11P36026 DBP6YNR038W 1890 nt1.45□□□□□ -2.18
UBP11P36026 LCD1YDR499W 2244 nt1.44□□□□□ -2.18
UBP11P36026 COG4YPR105C 2586 nt1.44□□□□□ -2.18
UBP11P36026 HKR1YDR420W 5409 nt1.44□□□□□ -2.18
UBP11P36026 tH(GUG)E1tH(GUG)E1 72 nt1.44□□□□□ -2.18
UBP11P36026 tH(GUG)E2tH(GUG)E2 72 nt1.44□□□□□ -2.18
UBP11P36026 tH(GUG)G1tH(GUG)G1 72 nt1.44□□□□□ -2.18
UBP11P36026 tH(GUG)G2tH(GUG)G2 72 nt1.44□□□□□ -2.18
UBP11P36026 tH(GUG)HtH(GUG)H 72 nt1.44□□□□□ -2.18
UBP11P36026 tH(GUG)KtH(GUG)K 72 nt1.44□□□□□ -2.18
UBP11P36026 tH(GUG)MtH(GUG)M 72 nt1.44□□□□□ -2.18
UBP11P36026 RPL34BYIL052C 366 nt1.44□□□□□ -2.18
UBP11P36026 YLL054CYLL054C 2532 nt1.44□□□□□ -2.18
UBP11P36026 PIK1YNL267W 3201 nt1.44□□□□□ -2.18
UBP11P36026 CUL3YGR003W 2235 nt1.44□□□□□ -2.18
UBP11P36026 PAN2YGL094C 3348 nt1.44□□□□□ -2.18
UBP11P36026 SEC21YNL287W 2808 nt1.44□□□□□ -2.18
UBP11P36026 CCH1YGR217W 6120 nt1.43□□□□□ -2.18
UBP11P36026 YDR344CYDR344C 444 nt1.43□□□□□ -2.18
UBP11P36026 CDC25YLR310C 4770 nt1.43□□□□□ -2.18
UBP11P36026 SPO75YLL005C 2607 nt1.43□□□□□ -2.18
UBP11P36026 YCK3YER123W 1575 nt1.42□□□□□ -2.18
UBP11P36026 PTP2YOR208W 2253 nt1.42□□□□□ -2.18
UBP11P36026 YHL042WYHL042W 453 nt1.42□□□□□ -2.18
UBP11P36026 YIL032CYIL032C 357 nt1.42□□□□□ -2.18
UBP11P36026 YJL015CYJL015C 285 nt1.42□□□□□ -2.18
UBP11P36026 snR14snR14 160 nt1.42□□□□□ -2.18
UBP11P36026 SWI4YER111C 3282 nt1.42□□□□□ -2.18
UBP11P36026 AZF1YOR113W 2745 nt1.41□□□□□ -2.18
UBP11P36026 SPT21YMR179W 2277 nt1.41□□□□□ -2.18
UBP11P36026 PIP2YOR363C 2991 nt1.41□□□□□ -2.18
UBP11P36026 HMRA2YCR096C 360 nt1.4□□□□□ -2.19
UBP11P36026 ALG13YGL047W 609 nt1.4□□□□□ -2.19
UBP11P36026 IML1YJR138W 4755 nt1.4□□□□□ -2.19
UBP11P36026 MMS4YBR098W 2076 nt1.39□□□□□ -2.19
UBP11P36026 YLL007CYLL007C 1998 nt1.39□□□□□ -2.19
UBP11P36026 SSS1YDR086C 243 nt1.39□□□□□ -2.19
UBP11P36026 YIL115W-AYIL115W-A 372 nt1.39□□□□□ -2.19
UBP11P36026 YMR321CYMR321C 318 nt1.39□□□□□ -2.19
UBP11P36026 TTI1YKL033W 3117 nt1.39□□□□□ -2.19
UBP11P36026 NUP188YML103C 4968 nt1.38□□□□□ -2.19
UBP11P36026 COG8YML071C 1824 nt1.38□□□□□ -2.19
UBP11P36026 YDR521WYDR521W 336 nt1.38□□□□□ -2.19
UBP11P36026 GPG1YGL121C 381 nt1.38□□□□□ -2.19
UBP11P36026 MDS3YGL197W 4464 nt1.38□□□□□ -2.19
UBP11P36026 AIM44YPL158C 2277 nt1.38□□□□□ -2.19
UBP11P36026 PKH2YOL100W 3246 nt1.38□□□□□ -2.19
UBP11P36026 RSM22YKL155C 1887 nt1.37□□□□□ -2.19
UBP11P36026 YJL120WYJL120W 324 nt1.37□□□□□ -2.19
UBP11P36026 YOR231C-AYOR231C-A 201 nt1.37□□□□□ -2.19
UBP11P36026 NUP145YGL092W 3954 nt1.36□□□□□ -2.19
UBP11P36026 YNL277W-AYNL277W-A 189 nt1.36□□□□□ -2.19
UBP11P36026 YBL008W-AYBL008W-A 240 nt1.35□□□□□ -2.19
UBP11P36026 APL3YBL037W 3078 nt1.35□□□□□ -2.19
UBP11P36026 snR60snR60 104 nt1.34□□□□□ -2.19
UBP11P36026 YER181CYER181C 324 nt1.34□□□□□ -2.19
UBP11P36026 RRT15YLR162W-A 189 nt1.34□□□□□ -2.19
UBP11P36026 RPS25BYLR333C 327 nt1.34□□□□□ -2.19
UBP11P36026 PBY1YBR094W 2262 nt1.33□□□□□ -2.2
UBP11P36026 VIK1YPL253C 1944 nt1.33□□□□□ -2.2
UBP11P36026 AHC1YOR023C 1701 nt1.33□□□□□ -2.2
UBP11P36026 YDL206WYDL206W 2289 nt1.33□□□□□ -2.2
UBP11P36026 SEC3YER008C 4011 nt1.32□□□□□ -2.2
UBP11P36026 YOR008C-AYOR008C-A 225 nt1.32□□□□□ -2.2
UBP11P36026 SPO21YOL091W 1830 nt1.31□□□□□ -2.2
UBP11P36026 SET3YKR029C 2256 nt1.31□□□□□ -2.2
UBP11P36026 PDE2YOR360C 1581 nt1.31□□□□□ -2.2
UBP11P36026 INA22YIR024C 651 nt1.31□□□□□ -2.2
UBP11P36026 YLL020CYLL020C 306 nt1.31□□□□□ -2.2
UBP11P36026 YNL028WYNL028W 318 nt1.31□□□□□ -2.2
UBP11P36026 YPR010C-AYPR010C-A 219 nt1.31□□□□□ -2.2
UBP11P36026 SLD3YGL113W 2007 nt1.31□□□□□ -2.2
UBP11P36026 CDC36YDL165W 576 nt1.3□□□□□ -2.2
UBP11P36026 RPS27BYHR021C 249 nt1.3□□□□□ -2.2
UBP11P36026 CSE2YNR010W 450 nt1.3□□□□□ -2.2
UBP11P36026 RPL33BYOR234C 324 nt1.3□□□□□ -2.2
UBP11P36026 RAD61YDR014W 1944 nt1.3□□□□□ -2.2
UBP11P36026 YAR009CYAR009C 3591 nt1.3□□□□□ -2.2
UBP11P36026 SIP4YJL089W 2490 nt1.29□□□□□ -2.2
UBP11P36026 RAD9YDR217C 3930 nt1.29□□□□□ -2.2
UBP11P36026 YOR218CYOR218C 420 nt1.29□□□□□ -2.2
UBP11P36026 YBR206WYBR206W 324 nt1.29□□□□□ -2.2
UBP11P36026 YBR221W-AYBR221W-A 105 nt1.29□□□□□ -2.2
UBP11P36026 FIG4YNL325C 2640 nt1.28□□□□□ -2.2
UBP11P36026 EAF1YDR359C 2949 nt1.28□□□□□ -2.2
UBP11P36026 YNL284C-BYNL284C-B 5268 nt1.28□□□□□ -2.2
UBP11P36026 YIL020C-AYIL020C-A 339 nt1.28□□□□□ -2.2
UBP11P36026 YOR011W-AYOR011W-A 207 nt1.28□□□□□ -2.2
UBP11P36026 CDC39YCR093W 6327 nt1.27□□□□□ -2.21
UBP11P36026 STO1YMR125W 2586 nt1.27□□□□□ -2.21
UBP11P36026 STB6YKL072W 2301 nt1.27□□□□□ -2.21
UBP11P36026 NUP157YER105C 4176 nt1.26□□□□□ -2.21
UBP11P36026 YGR069WYGR069W 336 nt1.26□□□□□ -2.21
UBP11P36026 YML099W-AYML099W-A 330 nt1.26□□□□□ -2.21
UBP11P36026 IES4YOR189W 351 nt1.26□□□□□ -2.21
UBP11P36026 NST1YNL091W 3723 nt1.26□□□□□ -2.21
UBP11P36026 YLR120W-AYLR120W-A 102 nt1.25□□□□□ -2.21
UBP11P36026 YBR200W-AYBR200W-A 165 nt1.25□□□□□ -2.21
Retrieved 100 of 7,029 protein–RNA pairs in 28.5 ms