Protein–RNA interactions for Protein: P25846

MSH1, DNA mismatch repair protein MSH1, mitochondrial, yeastyeast

Predictions only

Length 959 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
MSH1P25846 VIK1YPL253C 1944 nt1.75□□□□□ -2.13
MSH1P25846 YCK3YER123W 1575 nt1.74□□□□□ -2.13
MSH1P25846 YIR044CYIR044C 186 nt1.74□□□□□ -2.13
MSH1P25846 PFD1YJL179W 330 nt1.74□□□□□ -2.13
MSH1P25846 CSE2YNR010W 450 nt1.74□□□□□ -2.13
MSH1P25846 YOR302WYOR302W 78 nt1.74□□□□□ -2.13
MSH1P25846 UFD2YDL190C 2886 nt1.74□□□□□ -2.13
MSH1P25846 ALK1YGL021W 2283 nt1.74□□□□□ -2.13
MSH1P25846 LCD1YDR499W 2244 nt1.74□□□□□ -2.13
MSH1P25846 SPT21YMR179W 2277 nt1.73□□□□□ -2.13
MSH1P25846 YGR109W-BYGR109W-B 4644 nt1.73□□□□□ -2.13
MSH1P25846 snR55snR55 98 nt1.73□□□□□ -2.13
MSH1P25846 Q0032Q0032 291 nt1.73□□□□□ -2.13
MSH1P25846 COF1YLL050C 432 nt1.73□□□□□ -2.13
MSH1P25846 YMR046W-AYMR046W-A 129 nt1.73□□□□□ -2.13
MSH1P25846 YMR230W-AYMR230W-A 189 nt1.73□□□□□ -2.13
MSH1P25846 YNL028WYNL028W 318 nt1.73□□□□□ -2.13
MSH1P25846 MON2YNL297C 4911 nt1.72□□□□□ -2.13
MSH1P25846 TRM3YDL112W 4311 nt1.72□□□□□ -2.13
MSH1P25846 YDR406W-AYDR406W-A 246 nt1.72□□□□□ -2.13
MSH1P25846 APQ12YIL040W 417 nt1.72□□□□□ -2.13
MSH1P25846 YJL022WYJL022W 309 nt1.72□□□□□ -2.13
MSH1P25846 PAM16YJL104W 450 nt1.72□□□□□ -2.13
MSH1P25846 VPS55YJR044C 423 nt1.72□□□□□ -2.13
MSH1P25846 YOR019WYOR019W 2193 nt1.72□□□□□ -2.13
MSH1P25846 NCA2YPR155C 1851 nt1.71□□□□□ -2.14
MSH1P25846 tQ(UUG)E2tQ(UUG)E2 72 nt1.71□□□□□ -2.14
MSH1P25846 YMR307C-AYMR307C-A 195 nt1.71□□□□□ -2.14
MSH1P25846 ALY2YJL084C 3141 nt1.71□□□□□ -2.14
MSH1P25846 NUP192YJL039C 5052 nt1.7□□□□□ -2.14
MSH1P25846 tF(GAA)QtF(GAA)Q 75 nt1.7□□□□□ -2.14
MSH1P25846 YGL217CYGL217C 342 nt1.7□□□□□ -2.14
MSH1P25846 SLI15YBR156C 2097 nt1.7□□□□□ -2.14
MSH1P25846 PDE2YOR360C 1581 nt1.69□□□□□ -2.14
MSH1P25846 GPG1YGL121C 381 nt1.69□□□□□ -2.14
MSH1P25846 YOR376WYOR376W 369 nt1.69□□□□□ -2.14
MSH1P25846 RAD50YNL250W 3939 nt1.69□□□□□ -2.14
MSH1P25846 BST1YFL025C 3090 nt1.68□□□□□ -2.14
MSH1P25846 YLR419WYLR419W 4308 nt1.68□□□□□ -2.14
MSH1P25846 MEC1YBR136W 7107 nt1.68□□□□□ -2.14
MSH1P25846 VPS54YDR027C 2670 nt1.67□□□□□ -2.14
MSH1P25846 PET127YOR017W 2403 nt1.67□□□□□ -2.14
MSH1P25846 snR74snR74 88 nt1.67□□□□□ -2.14
MSH1P25846 RPL34BYIL052C 366 nt1.67□□□□□ -2.14
MSH1P25846 SBE22YHR103W 2559 nt1.67□□□□□ -2.14
MSH1P25846 YGL007C-AYGL007C-A 87 nt1.66□□□□□ -2.14
MSH1P25846 SEC5YDR166C 2916 nt1.66□□□□□ -2.14
MSH1P25846 YLR422WYLR422W 5799 nt1.66□□□□□ -2.14
MSH1P25846 COG4YPR105C 2586 nt1.65□□□□□ -2.14
MSH1P25846 IFH1YLR223C 3258 nt1.65□□□□□ -2.15
MSH1P25846 YPR092WYPR092W 306 nt1.65□□□□□ -2.15
MSH1P25846 SPO75YLL005C 2607 nt1.65□□□□□ -2.15
MSH1P25846 SLX4YLR135W 2247 nt1.64□□□□□ -2.15
MSH1P25846 SMC4YLR086W 4257 nt1.64□□□□□ -2.15
MSH1P25846 YLR140WYLR140W 327 nt1.64□□□□□ -2.15
MSH1P25846 YOR161W-BYOR161W-B 261 nt1.64□□□□□ -2.15
MSH1P25846 CUL3YGR003W 2235 nt1.64□□□□□ -2.15
MSH1P25846 CLU1YMR012W 3834 nt1.64□□□□□ -2.15
MSH1P25846 FYV8YGR196C 2454 nt1.63□□□□□ -2.15
MSH1P25846 YLL054CYLL054C 2532 nt1.63□□□□□ -2.15
MSH1P25846 TRM732YMR259C 4263 nt1.62□□□□□ -2.15
MSH1P25846 ANS1YHR126C 480 nt1.62□□□□□ -2.15
MSH1P25846 YLR294CYLR294C 330 nt1.62□□□□□ -2.15
MSH1P25846 YOR011W-AYOR011W-A 207 nt1.62□□□□□ -2.15
MSH1P25846 SXM1YDR395W 2835 nt1.62□□□□□ -2.15
MSH1P25846 PTP2YOR208W 2253 nt1.61□□□□□ -2.15
MSH1P25846 MSN5YDR335W 3675 nt1.61□□□□□ -2.15
MSH1P25846 YLL007CYLL007C 1998 nt1.6□□□□□ -2.15
MSH1P25846 YDL185C-AYDL185C-A 228 nt1.6□□□□□ -2.15
MSH1P25846 ISD11YER048W-A 285 nt1.6□□□□□ -2.15
MSH1P25846 RPS27BYHR021C 249 nt1.6□□□□□ -2.15
MSH1P25846 SPO21YOL091W 1830 nt1.6□□□□□ -2.15
MSH1P25846 PAN2YGL094C 3348 nt1.6□□□□□ -2.15
MSH1P25846 SPC110YDR356W 2835 nt1.6□□□□□ -2.15
MSH1P25846 EST2YLR318W 2655 nt1.6□□□□□ -2.15
MSH1P25846 SWI4YER111C 3282 nt1.6□□□□□ -2.15
MSH1P25846 YDR521WYDR521W 336 nt1.59□□□□□ -2.15
MSH1P25846 YJL120WYJL120W 324 nt1.59□□□□□ -2.15
MSH1P25846 YBL008W-AYBL008W-A 240 nt1.59□□□□□ -2.15
MSH1P25846 YLR466C-BYLR466C-B 117 nt1.59□□□□□ -2.15
MSH1P25846 CHS1YNL192W 3396 nt1.58□□□□□ -2.16
MSH1P25846 PKH2YOL100W 3246 nt1.58□□□□□ -2.16
MSH1P25846 YJL182CYJL182C 318 nt1.58□□□□□ -2.16
MSH1P25846 RRT15YLR162W-A 189 nt1.58□□□□□ -2.16
MSH1P25846 COA6YMR244C-A 315 nt1.58□□□□□ -2.16
MSH1P25846 snR14snR14 160 nt1.58□□□□□ -2.16
MSH1P25846 SGF11YPL047W 300 nt1.58□□□□□ -2.16
MSH1P25846 CCH1YGR217W 6120 nt1.57□□□□□ -2.16
MSH1P25846 YJL150WYJL150W 303 nt1.57□□□□□ -2.16
MSH1P25846 RPS25BYLR333C 327 nt1.57□□□□□ -2.16
MSH1P25846 YNL097C-BYNL097C-B 123 nt1.57□□□□□ -2.16
MSH1P25846 YOR218CYOR218C 420 nt1.57□□□□□ -2.16
MSH1P25846 YBR182C-AYBR182C-A 195 nt1.57□□□□□ -2.16
MSH1P25846 MMS4YBR098W 2076 nt1.57□□□□□ -2.16
MSH1P25846 PMD1YER132C 5262 nt1.57□□□□□ -2.16
MSH1P25846 YGR151CYGR151C 336 nt1.56□□□□□ -2.16
MSH1P25846 YBR131C-AYBR131C-A 90 nt1.56□□□□□ -2.16
MSH1P25846 ROM2YLR371W 4071 nt1.56□□□□□ -2.16
MSH1P25846 POL5YEL055C 3069 nt1.55□□□□□ -2.16
MSH1P25846 AIM44YPL158C 2277 nt1.55□□□□□ -2.16
Retrieved 100 of 7,029 protein–RNA pairs in 137.2 ms