Protein–RNA interactions for Protein: P61129

ZC3H6, Zinc finger CCCH domain-containing protein 6, humanhuman

Known RBP Predictions only

Length 1,189 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H6P61129 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC27.04■■□□□ 1.92
ZC3H6P61129 KSR1P1-201ENST00000446298 240 ntBASIC27.04■■□□□ 1.92
ZC3H6P61129 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC27.04■■□□□ 1.92
ZC3H6P61129 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC27.04■■□□□ 1.92
ZC3H6P61129 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC27.04■■□□□ 1.92
ZC3H6P61129 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC27.04■■□□□ 1.92
ZC3H6P61129 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC27.04■■□□□ 1.92
ZC3H6P61129 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC27.04■■□□□ 1.92
ZC3H6P61129 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC27.04■■□□□ 1.92
ZC3H6P61129 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC27.04■■□□□ 1.92
ZC3H6P61129 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC27.03■■□□□ 1.92
ZC3H6P61129 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC27.03■■□□□ 1.92
ZC3H6P61129 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC27.03■■□□□ 1.92
ZC3H6P61129 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC27.03■■□□□ 1.92
ZC3H6P61129 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC27.03■■□□□ 1.92
ZC3H6P61129 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC27.03■■□□□ 1.92
ZC3H6P61129 AC010203.1-204ENST00000548782 407 ntBASIC27.03■■□□□ 1.92
ZC3H6P61129 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC27.03■■□□□ 1.92
ZC3H6P61129 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC27.03■■□□□ 1.92
ZC3H6P61129 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC27.03■■□□□ 1.92
ZC3H6P61129 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC27.03■■□□□ 1.92
ZC3H6P61129 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC27.02■■□□□ 1.92
ZC3H6P61129 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
ZC3H6P61129 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC27.02■■□□□ 1.92
ZC3H6P61129 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC27.02■■□□□ 1.92
ZC3H6P61129 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC27.02■■□□□ 1.92
ZC3H6P61129 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC27.02■■□□□ 1.92
ZC3H6P61129 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC27.02■■□□□ 1.92
ZC3H6P61129 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC27.02■■□□□ 1.92
ZC3H6P61129 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC27.02■■□□□ 1.92
ZC3H6P61129 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC27.02■■□□□ 1.92
ZC3H6P61129 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC27.02■■□□□ 1.92
ZC3H6P61129 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC27.02■■□□□ 1.92
ZC3H6P61129 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC27.02■■□□□ 1.92
ZC3H6P61129 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC27.02■■□□□ 1.92
ZC3H6P61129 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC27.02■■□□□ 1.92
ZC3H6P61129 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC27.02■■□□□ 1.92
ZC3H6P61129 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC27.02■■□□□ 1.92
ZC3H6P61129 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC27.02■■□□□ 1.92
ZC3H6P61129 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC27.02■■□□□ 1.92
ZC3H6P61129 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
ZC3H6P61129 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC27.02■■□□□ 1.92
ZC3H6P61129 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
ZC3H6P61129 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.91
ZC3H6P61129 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC27.01■■□□□ 1.91
ZC3H6P61129 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC27.01■■□□□ 1.91
ZC3H6P61129 KRT16P1-201ENST00000399124 1418 ntBASIC27.01■■□□□ 1.91
ZC3H6P61129 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC27.01■■□□□ 1.91
ZC3H6P61129 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC27.01■■□□□ 1.91
ZC3H6P61129 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC27.01■■□□□ 1.91
ZC3H6P61129 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.91
ZC3H6P61129 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC27.01■■□□□ 1.91
ZC3H6P61129 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.91
ZC3H6P61129 WWOX-216ENST00000569818 525 ntBASIC27.01■■□□□ 1.91
ZC3H6P61129 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.91
ZC3H6P61129 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.91
ZC3H6P61129 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC27.01■■□□□ 1.91
ZC3H6P61129 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC27■■□□□ 1.91
ZC3H6P61129 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC27■■□□□ 1.91
ZC3H6P61129 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
ZC3H6P61129 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC27■■□□□ 1.91
ZC3H6P61129 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC27■■□□□ 1.91
ZC3H6P61129 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC27■■□□□ 1.91
ZC3H6P61129 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC27■■□□□ 1.91
ZC3H6P61129 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC27■■□□□ 1.91
ZC3H6P61129 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC27■■□□□ 1.91
ZC3H6P61129 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC27■■□□□ 1.91
ZC3H6P61129 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
ZC3H6P61129 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
ZC3H6P61129 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC27■■□□□ 1.91
ZC3H6P61129 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC27■■□□□ 1.91
ZC3H6P61129 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC27■■□□□ 1.91
ZC3H6P61129 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC27■■□□□ 1.91
ZC3H6P61129 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC27■■□□□ 1.91
ZC3H6P61129 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC27■■□□□ 1.91
ZC3H6P61129 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC27■■□□□ 1.91
ZC3H6P61129 GUSBP5-202ENST00000510805 1989 ntBASIC27■■□□□ 1.91
ZC3H6P61129 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC27■■□□□ 1.91
ZC3H6P61129 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC27■■□□□ 1.91
ZC3H6P61129 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC27■■□□□ 1.91
ZC3H6P61129 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC27■■□□□ 1.91
ZC3H6P61129 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC26.99■■□□□ 1.91
ZC3H6P61129 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC26.99■■□□□ 1.91
ZC3H6P61129 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
ZC3H6P61129 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
ZC3H6P61129 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC26.99■■□□□ 1.91
ZC3H6P61129 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC26.99■■□□□ 1.91
ZC3H6P61129 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC26.99■■□□□ 1.91
ZC3H6P61129 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC26.99■■□□□ 1.91
ZC3H6P61129 AC087388.1-201ENST00000571370 1112 ntBASIC26.99■■□□□ 1.91
ZC3H6P61129 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC26.99■■□□□ 1.91
ZC3H6P61129 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
ZC3H6P61129 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
ZC3H6P61129 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
ZC3H6P61129 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC26.99■■□□□ 1.91
ZC3H6P61129 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC26.99■■□□□ 1.91
ZC3H6P61129 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
ZC3H6P61129 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
ZC3H6P61129 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
ZC3H6P61129 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC26.98■■□□□ 1.91
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms