RNA–Protein interactions for RNA: ENST00000397024.1

MCF2L-207, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5 BASIC

Gene MCF2L, Length 490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-207ENST00000397024 NISCHQ9Y2I1 1504 aa46.84■■■■■ 5.09
MCF2L-207ENST00000397024 CCDC180Q9P1Z9 1646 aa41.81■■■■■ 4.28
MCF2L-207ENST00000397024 ABCC9O60706 1549 aa41.68■■■■■ 4.26
MCF2L-207ENST00000397024 RB1CC1Q8TDY2 1594 aa39.7■■■■□ 3.95
MCF2L-207ENST00000397024 DCAF8L2P0C7V8 631 aa39.51■■■■□ 3.92
MCF2L-207ENST00000397024 NACADO15069 1562 aa39.5■■■■□ 3.91
MCF2L-207ENST00000397024 MYO15BQ96JP2 1530 aa39.04■■■■□ 3.84
MCF2L-207ENST00000397024 DNAJC5BQ9UF47 199 aa38.98■■■■□ 3.83
MCF2L-207ENST00000397024 PABPN1Q86U42 306 aaKnown RBP eCLIP38.92■■■■□ 3.82
MCF2L-207ENST00000397024 ZCCHC6Q5VYS8 1495 aaKnown RBP38.86■■■■□ 3.81
MCF2L-207ENST00000397024 UNC13AQ9UPW8 1703 aa38.85■■■■□ 3.81
MCF2L-207ENST00000397024 DCAF1Q9Y4B6 1507 aa38.66■■■■□ 3.78
MCF2L-207ENST00000397024 BICRAQ9NZM4 1560 aa38.62■■■■□ 3.77
MCF2L-207ENST00000397024 SCRIBQ14160 1630 aa38.2■■■■□ 3.71
MCF2L-207ENST00000397024 SHROOM4Q9ULL8 1493 aa37.98■■■■□ 3.67
MCF2L-207ENST00000397024 CC2D2AQ9P2K1 1620 aa37.62■■■■□ 3.61
MCF2L-207ENST00000397024 EIF4G1Q04637 1599 aaKnown RBP37.6■■■■□ 3.61
MCF2L-207ENST00000397024 CECR2Q9BXF3 1484 aa37.48■■■■□ 3.59
MCF2L-207ENST00000397024 NCAPD3P42695 1498 aa36.52■■■■□ 3.44
MCF2L-207ENST00000397024 SMARCA4P51532 1647 aa36.46■■■■□ 3.43
MCF2L-207ENST00000397024 ATAD2BQ9ULI0 1458 aa36.46■■■■□ 3.43
MCF2L-207ENST00000397024 SMARCA2P51531 1590 aa36.31■■■■□ 3.4
MCF2L-207ENST00000397024 BAZ1AQ9NRL2 1556 aaPredicted RBP36.29■■■■□ 3.4
MCF2L-207ENST00000397024 HMGXB3Q12766 1538 aa36.21■■■■□ 3.39
MCF2L-207ENST00000397024 MROH2BQ7Z745 1585 aa36.15■■■■□ 3.38
MCF2L-207ENST00000397024 PEG3Q9GZU2 1588 aa36.09■■■■□ 3.37
MCF2L-207ENST00000397024 BAZ1BQ9UIG0 1483 aaKnown RBP36.08■■■■□ 3.37
MCF2L-207ENST00000397024 NESP48681 1621 aa35.91■■■■□ 3.34
MCF2L-207ENST00000397024 ERCC6Q03468 1493 aa35.9■■■■□ 3.34
MCF2L-207ENST00000397024 CUX2O14529 1486 aa35.72■■■■□ 3.31
MCF2L-207ENST00000397024 WIZO95785 1651 aa35.7■■■■□ 3.31
MCF2L-207ENST00000397024 LAMC3Q9Y6N6 1575 aa35.59■■■■□ 3.29
MCF2L-207ENST00000397024 RSF1Q96T23 1441 aaPredicted RBP35.5■■■■□ 3.27
MCF2L-207ENST00000397024 DNAJC5Q9H3Z4 198 aa35.5■■■■□ 3.27
MCF2L-207ENST00000397024 CADPSQ9ULU8 1353 aa35.44■■■■□ 3.26
MCF2L-207ENST00000397024 PDS5BQ9NTI5 1447 aa35.4■■■■□ 3.26
MCF2L-207ENST00000397024 THOC2Q8NI27 1593 aaKnown RBP35.4■■■■□ 3.26
MCF2L-207ENST00000397024 KIF21AQ7Z4S6 1674 aa35.38■■■■□ 3.25
MCF2L-207ENST00000397024 TOP2AP11388 1531 aaKnown RBP35.22■■■■□ 3.23
MCF2L-207ENST00000397024 MRC2Q9UBG0 1479 aa35.09■■■■□ 3.21
MCF2L-207ENST00000397024 CFTRP13569 1480 aa35.08■■■■□ 3.21
MCF2L-207ENST00000397024 FANCD2Q9BXW9 1451 aa35.02■■■■□ 3.2
MCF2L-207ENST00000397024 CEP164Q9UPV0 1460 aa34.99■■■■□ 3.19
MCF2L-207ENST00000397024 WDR62O43379 1518 aa34.97■■■■□ 3.19
MCF2L-207ENST00000397024 CCDC88BA6NC98 1476 aa34.9■■■■□ 3.18
MCF2L-207ENST00000397024 URB2Q14146 1524 aaKnown RBP34.75■■■■□ 3.15
MCF2L-207ENST00000397024 PRDM2Q13029 1718 aa34.65■■■■□ 3.14
MCF2L-207ENST00000397024 TOPBP1Q92547 1522 aa34.39■■■■□ 3.1
MCF2L-207ENST00000397024 IFT140Q96RY7 1462 aa34.29■■■■□ 3.08
MCF2L-207ENST00000397024 ZNF608Q9ULD9 1512 aaPredicted RBP34.29■■■■□ 3.08
MCF2L-207ENST00000397024 ABCC8Q09428 1581 aa34.28■■■■□ 3.08
MCF2L-207ENST00000397024 DNMBPQ6XZF7 1577 aa34.25■■■■□ 3.07
MCF2L-207ENST00000397024 OSCARQ8IYS5 282 aa34.23■■■■□ 3.07
MCF2L-207ENST00000397024 SUPT5HO00267 1087 aaKnown RBP34.2■■■■□ 3.07
MCF2L-207ENST00000397024 TARBP1Q13395 1621 aaKnown RBP34.07■■■■□ 3.04
MCF2L-207ENST00000397024 TRIM41Q8WV44 630 aa34.06■■■■□ 3.04
MCF2L-207ENST00000397024 POLA1P09884 1462 aaPredicted RBP34.06■■■■□ 3.04
MCF2L-207ENST00000397024 EIF4G3O43432 1585 aaKnown RBP34.02■■■■□ 3.04
MCF2L-207ENST00000397024 AQRO60306 1485 aaKnown RBP eCLIP34.02■■■■□ 3.04
MCF2L-207ENST00000397024 RAD54L2Q9Y4B4 1467 aa33.98■■■■□ 3.03
MCF2L-207ENST00000397024 SOGA1O94964 1423 aa33.94■■■■□ 3.02
MCF2L-207ENST00000397024 CUX1P39880 1505 aa33.93■■■■□ 3.02
MCF2L-207ENST00000397024 FGD5Q6ZNL6 1462 aa33.88■■■■□ 3.01
MCF2L-207ENST00000397024 TDRD9Q8NDG6 1382 aaKnown RBP33.86■■■■□ 3.01
MCF2L-207ENST00000397024 FBLN2P98095 1184 aa33.74■■■□□ 2.99
MCF2L-207ENST00000397024 CHD1O14646 1710 aa33.73■■■□□ 2.99
MCF2L-207ENST00000397024 RIMBP3CA6NJZ7 1639 aa33.7■■■□□ 2.99
MCF2L-207ENST00000397024 RIMBP3BA6NNM3 1639 aa33.7■■■□□ 2.99
MCF2L-207ENST00000397024 RIMBP3Q9UFD9 1639 aa33.7■■■□□ 2.99
MCF2L-207ENST00000397024 ARHGEF11O15085 1522 aa33.63■■■□□ 2.97
MCF2L-207ENST00000397024 SNAPC4Q5SXM2 1469 aa33.63■■■□□ 2.97
MCF2L-207ENST00000397024 WDR97A6NE52 1622 aa33.62■■■□□ 2.97
MCF2L-207ENST00000397024 GRIN2BQ13224 1484 aa33.56■■■□□ 2.96
MCF2L-207ENST00000397024 CHMP7Q8WUX9 453 aaPredicted RBP33.51■■■□□ 2.95
MCF2L-207ENST00000397024 GAPVD1Q14C86 1478 aa33.5■■■□□ 2.95
MCF2L-207ENST00000397024 MAGI1Q96QZ7 1491 aaPredicted RBP33.5■■■□□ 2.95
MCF2L-207ENST00000397024 ABCA10Q8WWZ4 1543 aa33.5■■■□□ 2.95
MCF2L-207ENST00000397024 CYB5RLQ6IPT4 315 aa33.45■■■□□ 2.95
MCF2L-207ENST00000397024 WRNQ14191 1432 aaPredicted RBP eCLIP33.44■■■□□ 2.94
MCF2L-207ENST00000397024 SYNJ2O15056 1496 aa33.42■■■□□ 2.94
MCF2L-207ENST00000397024 SYNJ1O43426 1573 aa33.41■■■□□ 2.94
MCF2L-207ENST00000397024 TOP2BQ02880 1626 aa33.41■■■□□ 2.94
MCF2L-207ENST00000397024 ABCA5Q8WWZ7 1642 aa33.41■■■□□ 2.94
MCF2L-207ENST00000397024 PBRM1Q86U86 1689 aa33.41■■■□□ 2.94
MCF2L-207ENST00000397024 BIVM-ERCC5R4GMW8 1640 aa33.39■■■□□ 2.94
MCF2L-207ENST00000397024 CLASP1Q7Z460 1538 aa33.36■■■□□ 2.93
MCF2L-207ENST00000397024 ARAP1Q96P48 1450 aa33.34■■■□□ 2.93
MCF2L-207ENST00000397024 GRIN2AQ12879 1464 aa33.13■■■□□ 2.89
MCF2L-207ENST00000397024 ADAMTS12P58397 1594 aa33.13■■■□□ 2.89
MCF2L-207ENST00000397024 FHAD1B1AJZ9 1412 aa33.08■■■□□ 2.89
MCF2L-207ENST00000397024 ERICH3Q5RHP9 1530 aa33.06■■■□□ 2.88
MCF2L-207ENST00000397024 NUP160Q12769 1436 aa33.02■■■□□ 2.88
MCF2L-207ENST00000397024 CEP170Q5SW79 1584 aa33.01■■■□□ 2.88
MCF2L-207ENST00000397024 TRHP20396 242 aaPredicted RBP32.94■■■□□ 2.86
MCF2L-207ENST00000397024 ERCC6L2Q5T890 1561 aa32.93■■■□□ 2.86
MCF2L-207ENST00000397024 IGF1RP08069 1367 aa32.82■■■□□ 2.84
MCF2L-207ENST00000397024 SHROOM2Q13796 1616 aa32.81■■■□□ 2.84
MCF2L-207ENST00000397024 KIF27Q86VH2 1401 aa32.77■■■□□ 2.84
MCF2L-207ENST00000397024 JPH4Q96JJ6 628 aa32.75■■■□□ 2.83
MCF2L-207ENST00000397024 PRG4Q92954 1404 aaPredicted RBP32.7■■■□□ 2.83
Retrieved 100 of 20,778 RNA–protein pairs in 71 ms