Protein–RNA interactions for Protein: P53044

UFD1, Ubiquitin fusion degradation protein 1, yeastyeast

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
UFD1P53044 ISF1YMR081C 1017 nt1.08□□□□□ -2.24
UFD1P53044 RPB10YOR210W 213 nt1.08□□□□□ -2.24
UFD1P53044 NOC3YLR002C 1992 nt1.07□□□□□ -2.24
UFD1P53044 YLL054CYLL054C 2532 nt1.07□□□□□ -2.24
UFD1P53044 UPS1YLR193C 528 nt1.07□□□□□ -2.24
UFD1P53044 RRT1YBL048W 312 nt1.07□□□□□ -2.24
UFD1P53044 LEE1YPL054W 906 nt1.07□□□□□ -2.24
UFD1P53044 NUT2YPR168W 474 nt1.07□□□□□ -2.24
UFD1P53044 APL1YJR005W 2103 nt1.07□□□□□ -2.24
UFD1P53044 AZF1YOR113W 2745 nt1.07□□□□□ -2.24
UFD1P53044 IML1YJR138W 4755 nt1.07□□□□□ -2.24
UFD1P53044 SPO75YLL005C 2607 nt1.06□□□□□ -2.24
UFD1P53044 YDL211CYDL211C 1119 nt1.06□□□□□ -2.24
UFD1P53044 YDR182W-AYDR182W-A 204 nt1.06□□□□□ -2.24
UFD1P53044 tV(UAC)BtV(UAC)B 74 nt1.06□□□□□ -2.24
UFD1P53044 tV(UAC)DtV(UAC)D 74 nt1.06□□□□□ -2.24
UFD1P53044 YKL202WYKL202W 582 nt1.06□□□□□ -2.24
UFD1P53044 YMR175W-AYMR175W-A 195 nt1.06□□□□□ -2.24
UFD1P53044 snR14snR14 160 nt1.06□□□□□ -2.24
UFD1P53044 VPS54YDR027C 2670 nt1.06□□□□□ -2.24
UFD1P53044 MSN5YDR335W 3675 nt1.05□□□□□ -2.24
UFD1P53044 RRT15YLR162W-A 189 nt1.05□□□□□ -2.24
UFD1P53044 YMR001C-AYMR001C-A 231 nt1.05□□□□□ -2.24
UFD1P53044 NST1YNL091W 3723 nt1.04□□□□□ -2.24
UFD1P53044 SCW11YGL028C 1629 nt1.04□□□□□ -2.24
UFD1P53044 NUP188YML103C 4968 nt1.04□□□□□ -2.24
UFD1P53044 MUK1YPL070W 1839 nt1.04□□□□□ -2.24
UFD1P53044 YDR169C-AYDR169C-A 150 nt1.04□□□□□ -2.24
UFD1P53044 YOR053WYOR053W 342 nt1.04□□□□□ -2.24
UFD1P53044 YOR293C-AYOR293C-A 150 nt1.04□□□□□ -2.24
UFD1P53044 VAM6YDL077C 3150 nt1.04□□□□□ -2.24
UFD1P53044 RPL34BYIL052C 366 nt1.03□□□□□ -2.24
UFD1P53044 YJL135WYJL135W 318 nt1.03□□□□□ -2.24
UFD1P53044 snR51snR51 107 nt1.03□□□□□ -2.24
UFD1P53044 PAC1YOR269W 1485 nt1.03□□□□□ -2.24
UFD1P53044 PIP2YOR363C 2991 nt1.03□□□□□ -2.24
UFD1P53044 ZIP2YGL249W 2115 nt1.03□□□□□ -2.25
UFD1P53044 MDS3YGL197W 4464 nt1.02□□□□□ -2.25
UFD1P53044 snR72snR72 98 nt1.02□□□□□ -2.25
UFD1P53044 YER137W-AYER137W-A 306 nt1.02□□□□□ -2.25
UFD1P53044 YHR138CYHR138C 345 nt1.02□□□□□ -2.25
UFD1P53044 YLR154W-FYLR154W-F 141 nt1.02□□□□□ -2.25
UFD1P53044 BSC3YLR465C 309 nt1.02□□□□□ -2.25
UFD1P53044 APL2YKL135C 2181 nt1.01□□□□□ -2.25
UFD1P53044 SPT7YBR081C 3999 nt1.01□□□□□ -2.25
UFD1P53044 YMR242W-AYMR242W-A 90 nt1.01□□□□□ -2.25
UFD1P53044 YNL058CYNL058C 951 nt1.01□□□□□ -2.25
UFD1P53044 ENV11YGR071C 2583 nt1.01□□□□□ -2.25
UFD1P53044 MPT5YGL178W 2580 nt1□□□□□ -2.25
UFD1P53044 NPC2YDL046W 522 nt1□□□□□ -2.25
UFD1P53044 YJR029WYJR029W 5268 nt1□□□□□ -2.25
UFD1P53044 YPR137C-BYPR137C-B 5268 nt1□□□□□ -2.25
UFD1P53044 SPT21YMR179W 2277 nt0.99□□□□□ -2.25
UFD1P53044 AIM44YPL158C 2277 nt0.99□□□□□ -2.25
UFD1P53044 YDR157WYDR157W 402 nt0.99□□□□□ -2.25
UFD1P53044 YOR199WYOR199W 330 nt0.99□□□□□ -2.25
UFD1P53044 YLL020CYLL020C 306 nt0.98□□□□□ -2.25
UFD1P53044 YAL068W-AYAL068W-A 255 nt0.98□□□□□ -2.25
UFD1P53044 IRC23YOR044W 474 nt0.98□□□□□ -2.25
UFD1P53044 YOR121CYOR121C 306 nt0.98□□□□□ -2.25
UFD1P53044 YPR063CYPR063C 423 nt0.98□□□□□ -2.25
UFD1P53044 SIP4YJL089W 2490 nt0.98□□□□□ -2.25
UFD1P53044 FIG4YNL325C 2640 nt0.98□□□□□ -2.25
UFD1P53044 LCD1YDR499W 2244 nt0.97□□□□□ -2.25
UFD1P53044 YOR072W-AYOR072W-A 249 nt0.97□□□□□ -2.25
UFD1P53044 INP2YMR163C 2118 nt0.97□□□□□ -2.25
UFD1P53044 SCC2YDR180W 4482 nt0.96□□□□□ -2.26
UFD1P53044 YOL160WYOL160W 342 nt0.96□□□□□ -2.26
UFD1P53044 YOR108C-AYOR108C-A 210 nt0.96□□□□□ -2.26
UFD1P53044 NUT1YGL151W 3399 nt0.96□□□□□ -2.26
UFD1P53044 SLI15YBR156C 2097 nt0.96□□□□□ -2.26
UFD1P53044 YJR003CYJR003C 1560 nt0.96□□□□□ -2.26
UFD1P53044 EMT1tM(CAU)D 73 nt0.95□□□□□ -2.26
UFD1P53044 EMT5tM(CAU)J1 73 nt0.95□□□□□ -2.26
UFD1P53044 EMT3tM(CAU)J2 73 nt0.95□□□□□ -2.26
UFD1P53044 EMT4tM(CAU)M 73 nt0.95□□□□□ -2.26
UFD1P53044 EMT2tM(CAU)O2 73 nt0.95□□□□□ -2.26
UFD1P53044 RPS20YHL015W 366 nt0.95□□□□□ -2.26
UFD1P53044 YOR161W-BYOR161W-B 261 nt0.95□□□□□ -2.26
UFD1P53044 YCS4YLR272C 3531 nt0.95□□□□□ -2.26
UFD1P53044 COG4YPR105C 2586 nt0.94□□□□□ -2.26
UFD1P53044 YFL019CYFL019C 354 nt0.94□□□□□ -2.26
UFD1P53044 YML007C-AYML007C-A 111 nt0.94□□□□□ -2.26
UFD1P53044 YBR221W-AYBR221W-A 105 nt0.94□□□□□ -2.26
UFD1P53044 SWI4YER111C 3282 nt0.94□□□□□ -2.26
UFD1P53044 SLD3YGL113W 2007 nt0.93□□□□□ -2.26
UFD1P53044 STO1YMR125W 2586 nt0.93□□□□□ -2.26
UFD1P53044 YDR426CYDR426C 378 nt0.93□□□□□ -2.26
UFD1P53044 YAR053WYAR053W 297 nt0.93□□□□□ -2.26
UFD1P53044 YPR002C-AYPR002C-A 198 nt0.93□□□□□ -2.26
UFD1P53044 TTI1YKL033W 3117 nt0.93□□□□□ -2.26
UFD1P53044 APL3YBL037W 3078 nt0.92□□□□□ -2.26
UFD1P53044 ATG31YDR022C 591 nt0.92□□□□□ -2.26
UFD1P53044 PKH2YOL100W 3246 nt0.92□□□□□ -2.26
UFD1P53044 MMS4YBR098W 2076 nt0.92□□□□□ -2.26
UFD1P53044 SET3YKR029C 2256 nt0.91□□□□□ -2.26
UFD1P53044 CSN9YDR179C 489 nt0.91□□□□□ -2.26
UFD1P53044 YBL008W-AYBL008W-A 240 nt0.91□□□□□ -2.26
UFD1P53044 YMR290W-AYMR290W-A 348 nt0.91□□□□□ -2.26
UFD1P53044 YBR012CYBR012C 420 nt0.91□□□□□ -2.26
Retrieved 100 of 7,029 protein–RNA pairs in 112.8 ms