Protein–RNA interactions for Protein: P39940

RSP5, E3 ubiquitin-protein ligase RSP5, yeastyeast

Known RBP Predictions only

Length 809 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RSP5P39940 YHR032W-AYHR032W-A 180 nt2.35□□□□□ -2.03
RSP5P39940 KTI11YBL071W-A 249 nt2.35□□□□□ -2.03
RSP5P39940 MSH5YDL154W 2706 nt2.35□□□□□ -2.03
RSP5P39940 MDM20YOL076W 2391 nt2.35□□□□□ -2.03
RSP5P39940 MSC6YOR354C 2079 nt2.34□□□□□ -2.03
RSP5P39940 MBB1YJL199C 327 nt2.34□□□□□ -2.03
RSP5P39940 SPF1YEL031W 3648 nt2.34□□□□□ -2.04
RSP5P39940 MLH3YPL164C 2148 nt2.33□□□□□ -2.04
RSP5P39940 YOL098CYOL098C 3114 nt2.33□□□□□ -2.04
RSP5P39940 STE11YLR362W 2154 nt2.33□□□□□ -2.04
RSP5P39940 YIL156W-BYIL156W-B 222 nt2.33□□□□□ -2.04
RSP5P39940 COF1YLL050C 432 nt2.33□□□□□ -2.04
RSP5P39940 HSH155YMR288W 2916 nt2.33□□□□□ -2.04
RSP5P39940 SGS1YMR190C 4344 nt2.33□□□□□ -2.04
RSP5P39940 SEY1YOR165W 2331 nt2.33□□□□□ -2.04
RSP5P39940 TOF1YNL273W 3717 nt2.32□□□□□ -2.04
RSP5P39940 BUD2YKL092C 3315 nt2.32□□□□□ -2.04
RSP5P39940 RLM1YPL089C 2031 nt2.32□□□□□ -2.04
RSP5P39940 SRP14YDL092W 441 nt2.32□□□□□ -2.04
RSP5P39940 VTC1YER072W 390 nt2.32□□□□□ -2.04
RSP5P39940 YBL012CYBL012C 402 nt2.32□□□□□ -2.04
RSP5P39940 AGC1YPR021C 2709 nt2.32□□□□□ -2.04
RSP5P39940 IRA2YOL081W 9240 nt2.32□□□□□ -2.04
RSP5P39940 CHC1YGL206C 4962 nt2.31□□□□□ -2.04
RSP5P39940 BNI1YNL271C 5862 nt2.31□□□□□ -2.04
RSP5P39940 YDR524C-AYDR524C-A 120 nt2.31□□□□□ -2.04
RSP5P39940 ZIP2YGL249W 2115 nt2.31□□□□□ -2.04
RSP5P39940 YMR242W-AYMR242W-A 90 nt2.31□□□□□ -2.04
RSP5P39940 NEW1YPL226W 3591 nt2.31□□□□□ -2.04
RSP5P39940 ENV11YGR071C 2583 nt2.31□□□□□ -2.04
RSP5P39940 YEF3YLR249W 3135 nt2.31□□□□□ -2.04
RSP5P39940 SPC98YNL126W 2541 nt2.3□□□□□ -2.04
RSP5P39940 MSB1YOR188W 3414 nt2.3□□□□□ -2.04
RSP5P39940 YDL118WYDL118W 381 nt2.3□□□□□ -2.04
RSP5P39940 YEL014CYEL014C 306 nt2.3□□□□□ -2.04
RSP5P39940 VPS55YJR044C 423 nt2.3□□□□□ -2.04
RSP5P39940 YKL165C-AYKL165C-A 234 nt2.3□□□□□ -2.04
RSP5P39940 APL2YKL135C 2181 nt2.3□□□□□ -2.04
RSP5P39940 DGR2YKL121W 2559 nt2.3□□□□□ -2.04
RSP5P39940 SCD5YOR329C 2619 nt2.29□□□□□ -2.04
RSP5P39940 SEC63YOR254C 1992 nt2.29□□□□□ -2.04
RSP5P39940 YLR120W-AYLR120W-A 102 nt2.29□□□□□ -2.04
RSP5P39940 YOR015WYOR015W 360 nt2.29□□□□□ -2.04
RSP5P39940 FRK1YPL141C 2598 nt2.29□□□□□ -2.04
RSP5P39940 YFR016CYFR016C 3702 nt2.29□□□□□ -2.04
RSP5P39940 tW(CCA)G1tW(CCA)G1 72 nt2.28□□□□□ -2.04
RSP5P39940 tW(CCA)G2tW(CCA)G2 72 nt2.28□□□□□ -2.04
RSP5P39940 tW(CCA)JtW(CCA)J 72 nt2.28□□□□□ -2.04
RSP5P39940 tW(CCA)KtW(CCA)K 72 nt2.28□□□□□ -2.04
RSP5P39940 tW(CCA)MtW(CCA)M 72 nt2.28□□□□□ -2.04
RSP5P39940 tW(CCA)PtW(CCA)P 72 nt2.28□□□□□ -2.04
RSP5P39940 AI5_ALPHAQ0070 1893 nt2.28□□□□□ -2.04
RSP5P39940 PDE2YOR360C 1581 nt2.27□□□□□ -2.05
RSP5P39940 MPT5YGL178W 2580 nt2.27□□□□□ -2.05
RSP5P39940 OLI1Q0130 231 nt2.27□□□□□ -2.05
RSP5P39940 YMR321CYMR321C 318 nt2.27□□□□□ -2.05
RSP5P39940 ATG11YPR049C 3537 nt2.27□□□□□ -2.05
RSP5P39940 PUT3YKL015W 2940 nt2.27□□□□□ -2.05
RSP5P39940 PIG1YLR273C 1947 nt2.27□□□□□ -2.05
RSP5P39940 YHR180W-AYHR180W-A 183 nt2.26□□□□□ -2.05
RSP5P39940 INA22YIR024C 651 nt2.26□□□□□ -2.05
RSP5P39940 YIR044CYIR044C 186 nt2.26□□□□□ -2.05
RSP5P39940 MAD1YGL086W 2250 nt2.26□□□□□ -2.05
RSP5P39940 MSH6YDR097C 3729 nt2.26□□□□□ -2.05
RSP5P39940 FKS3YMR306W 5358 nt2.25□□□□□ -2.05
RSP5P39940 YNL097C-BYNL097C-B 123 nt2.25□□□□□ -2.05
RSP5P39940 YOR218CYOR218C 420 nt2.25□□□□□ -2.05
RSP5P39940 RAD34YDR314C 2079 nt2.25□□□□□ -2.05
RSP5P39940 SKP2YNL311C 2292 nt2.25□□□□□ -2.05
RSP5P39940 SEC16YPL085W 6588 nt2.24□□□□□ -2.05
RSP5P39940 ATG9YDL149W 2994 nt2.24□□□□□ -2.05
RSP5P39940 PDR3YBL005W 2931 nt2.24□□□□□ -2.05
RSP5P39940 VPS54YDR027C 2670 nt2.24□□□□□ -2.05
RSP5P39940 RPL34BYIL052C 366 nt2.23□□□□□ -2.05
RSP5P39940 YBL109WYBL109W 336 nt2.23□□□□□ -2.05
RSP5P39940 YOR343W-BYOR343W-B 5313 nt2.22□□□□□ -2.05
RSP5P39940 RPS27BYHR021C 249 nt2.22□□□□□ -2.05
RSP5P39940 PDR11YIL013C 4236 nt2.22□□□□□ -2.05
RSP5P39940 YDR182W-AYDR182W-A 204 nt2.21□□□□□ -2.06
RSP5P39940 RRT15YLR162W-A 189 nt2.21□□□□□ -2.06
RSP5P39940 PDR8YLR266C 2106 nt2.21□□□□□ -2.06
RSP5P39940 UFD4YKL010C 4452 nt2.2□□□□□ -2.06
RSP5P39940 USO1YDL058W 5373 nt2.2□□□□□ -2.06
RSP5P39940 YGL217CYGL217C 342 nt2.2□□□□□ -2.06
RSP5P39940 snR46snR46 197 nt2.2□□□□□ -2.06
RSP5P39940 IRC8YJL051W 2469 nt2.2□□□□□ -2.06
RSP5P39940 STH1YIL126W 4080 nt2.2□□□□□ -2.06
RSP5P39940 HIR3YJR140C 4947 nt2.2□□□□□ -2.06
RSP5P39940 CUL3YGR003W 2235 nt2.19□□□□□ -2.06
RSP5P39940 MGA2YIR033W 3342 nt2.19□□□□□ -2.06
RSP5P39940 MYO4YAL029C 4416 nt2.19□□□□□ -2.06
RSP5P39940 LRE1YCL051W 1752 nt2.19□□□□□ -2.06
RSP5P39940 ATP7YKL016C 525 nt2.19□□□□□ -2.06
RSP5P39940 DNF1YER166W 4716 nt2.19□□□□□ -2.06
RSP5P39940 SFB2YNL049C 2631 nt2.19□□□□□ -2.06
RSP5P39940 SEC31YDL195W 3822 nt2.18□□□□□ -2.06
RSP5P39940 YBL053WYBL053W 375 nt2.18□□□□□ -2.06
RSP5P39940 KOG1YHR186C 4674 nt2.18□□□□□ -2.06
RSP5P39940 YNL144CYNL144C 2223 nt2.18□□□□□ -2.06
RSP5P39940 SPO75YLL005C 2607 nt2.18□□□□□ -2.06
Retrieved 100 of 7,029 protein–RNA pairs in 24.1 ms