Protein–RNA interactions for Protein: P0C2J4

TY2A-LR1, Transposon Ty2-LR1 Gag polyprotein, yeastyeast

Predictions only

Length 438 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY2A-LR1P0C2J4 YMR272W-BYMR272W-B 108 nt1.74□□□□□ -2.13
TY2A-LR1P0C2J4 YDR182W-AYDR182W-A 204 nt1.73□□□□□ -2.13
TY2A-LR1P0C2J4 PAU2YEL049W 363 nt1.73□□□□□ -2.13
TY2A-LR1P0C2J4 DBP6YNR038W 1890 nt1.73□□□□□ -2.13
TY2A-LR1P0C2J4 SKI3YPR189W 4299 nt1.72□□□□□ -2.13
TY2A-LR1P0C2J4 YER181CYER181C 324 nt1.72□□□□□ -2.13
TY2A-LR1P0C2J4 SDH2YLL041C 801 nt1.72□□□□□ -2.13
TY2A-LR1P0C2J4 YML099W-AYML099W-A 330 nt1.72□□□□□ -2.13
TY2A-LR1P0C2J4 NIP100YPL174C 2607 nt1.71□□□□□ -2.13
TY2A-LR1P0C2J4 YIL115W-AYIL115W-A 372 nt1.71□□□□□ -2.14
TY2A-LR1P0C2J4 YPR063CYPR063C 423 nt1.71□□□□□ -2.14
TY2A-LR1P0C2J4 AI5_ALPHAQ0070 1893 nt1.7□□□□□ -2.14
TY2A-LR1P0C2J4 OST1YJL002C 1431 nt1.7□□□□□ -2.14
TY2A-LR1P0C2J4 YOR231C-AYOR231C-A 201 nt1.7□□□□□ -2.14
TY2A-LR1P0C2J4 MYO2YOR326W 4725 nt1.7□□□□□ -2.14
TY2A-LR1P0C2J4 REV3YPL167C 4515 nt1.7□□□□□ -2.14
TY2A-LR1P0C2J4 IRC20YLR247C 4671 nt1.69□□□□□ -2.14
TY2A-LR1P0C2J4 MAD1YGL086W 2250 nt1.69□□□□□ -2.14
TY2A-LR1P0C2J4 PKH3YDR466W 2697 nt1.69□□□□□ -2.14
TY2A-LR1P0C2J4 RTP1YMR185W 2946 nt1.69□□□□□ -2.14
TY2A-LR1P0C2J4 EMC5YIL027C 426 nt1.69□□□□□ -2.14
TY2A-LR1P0C2J4 YMR290W-AYMR290W-A 348 nt1.69□□□□□ -2.14
TY2A-LR1P0C2J4 RPL31AYDL075W 342 nt1.68□□□□□ -2.14
TY2A-LR1P0C2J4 YMR175W-AYMR175W-A 195 nt1.68□□□□□ -2.14
TY2A-LR1P0C2J4 HSL1YKL101W 4557 nt1.68□□□□□ -2.14
TY2A-LR1P0C2J4 RAD34YDR314C 2079 nt1.68□□□□□ -2.14
TY2A-LR1P0C2J4 CTF4YPR135W 2784 nt1.67□□□□□ -2.14
TY2A-LR1P0C2J4 NOC3YLR002C 1992 nt1.67□□□□□ -2.14
TY2A-LR1P0C2J4 YDL211CYDL211C 1119 nt1.67□□□□□ -2.14
TY2A-LR1P0C2J4 YIL032CYIL032C 357 nt1.67□□□□□ -2.14
TY2A-LR1P0C2J4 CFT1YDR301W 4074 nt1.66□□□□□ -2.14
TY2A-LR1P0C2J4 SPC98YNL126W 2541 nt1.66□□□□□ -2.14
TY2A-LR1P0C2J4 SPO24YPR036W-A 204 nt1.66□□□□□ -2.14
TY2A-LR1P0C2J4 KCS1YDR017C 3153 nt1.65□□□□□ -2.14
TY2A-LR1P0C2J4 YHL042WYHL042W 453 nt1.65□□□□□ -2.15
TY2A-LR1P0C2J4 SEC5YDR166C 2916 nt1.65□□□□□ -2.15
TY2A-LR1P0C2J4 YIR044CYIR044C 186 nt1.64□□□□□ -2.15
TY2A-LR1P0C2J4 YPR010C-AYPR010C-A 219 nt1.64□□□□□ -2.15
TY2A-LR1P0C2J4 SPT21YMR179W 2277 nt1.64□□□□□ -2.15
TY2A-LR1P0C2J4 UFD2YDL190C 2886 nt1.64□□□□□ -2.15
TY2A-LR1P0C2J4 RAD50YNL250W 3939 nt1.63□□□□□ -2.15
TY2A-LR1P0C2J4 LCD1YDR499W 2244 nt1.63□□□□□ -2.15
TY2A-LR1P0C2J4 YDR344CYDR344C 444 nt1.63□□□□□ -2.15
TY2A-LR1P0C2J4 YJL022WYJL022W 309 nt1.63□□□□□ -2.15
TY2A-LR1P0C2J4 NUT1YGL151W 3399 nt1.63□□□□□ -2.15
TY2A-LR1P0C2J4 SCW11YGL028C 1629 nt1.62□□□□□ -2.15
TY2A-LR1P0C2J4 MON2YNL297C 4911 nt1.62□□□□□ -2.15
TY2A-LR1P0C2J4 snR60snR60 104 nt1.62□□□□□ -2.15
TY2A-LR1P0C2J4 ALG13YGL047W 609 nt1.62□□□□□ -2.15
TY2A-LR1P0C2J4 MEC1YBR136W 7107 nt1.62□□□□□ -2.15
TY2A-LR1P0C2J4 YCK3YER123W 1575 nt1.62□□□□□ -2.15
TY2A-LR1P0C2J4 SAC3YDR159W 3906 nt1.61□□□□□ -2.15
TY2A-LR1P0C2J4 COG8YML071C 1824 nt1.61□□□□□ -2.15
TY2A-LR1P0C2J4 CUL3YGR003W 2235 nt1.61□□□□□ -2.15
TY2A-LR1P0C2J4 SSS1YDR086C 243 nt1.61□□□□□ -2.15
TY2A-LR1P0C2J4 RPL34BYIL052C 366 nt1.61□□□□□ -2.15
TY2A-LR1P0C2J4 COF1YLL050C 432 nt1.61□□□□□ -2.15
TY2A-LR1P0C2J4 SLI15YBR156C 2097 nt1.61□□□□□ -2.15
TY2A-LR1P0C2J4 MPT5YGL178W 2580 nt1.6□□□□□ -2.15
TY2A-LR1P0C2J4 BPH1YCR032W 6504 nt1.6□□□□□ -2.15
TY2A-LR1P0C2J4 LRE1YCL051W 1752 nt1.6□□□□□ -2.15
TY2A-LR1P0C2J4 VPS54YDR027C 2670 nt1.6□□□□□ -2.15
TY2A-LR1P0C2J4 ADR1YDR216W 3972 nt1.6□□□□□ -2.15
TY2A-LR1P0C2J4 YOR019WYOR019W 2193 nt1.6□□□□□ -2.15
TY2A-LR1P0C2J4 KIP1YBL063W 3336 nt1.6□□□□□ -2.15
TY2A-LR1P0C2J4 ALK1YGL021W 2283 nt1.59□□□□□ -2.15
TY2A-LR1P0C2J4 NCA2YPR155C 1851 nt1.59□□□□□ -2.15
TY2A-LR1P0C2J4 YHR210CYHR210C 1026 nt1.59□□□□□ -2.15
TY2A-LR1P0C2J4 YMR230W-AYMR230W-A 189 nt1.59□□□□□ -2.15
TY2A-LR1P0C2J4 YOR376WYOR376W 369 nt1.59□□□□□ -2.15
TY2A-LR1P0C2J4 SLX4YLR135W 2247 nt1.59□□□□□ -2.16
TY2A-LR1P0C2J4 TRM3YDL112W 4311 nt1.59□□□□□ -2.16
TY2A-LR1P0C2J4 SMC4YLR086W 4257 nt1.58□□□□□ -2.16
TY2A-LR1P0C2J4 YGL217CYGL217C 342 nt1.58□□□□□ -2.16
TY2A-LR1P0C2J4 YLR140WYLR140W 327 nt1.58□□□□□ -2.16
TY2A-LR1P0C2J4 YCS4YLR272C 3531 nt1.58□□□□□ -2.16
TY2A-LR1P0C2J4 BST1YFL025C 3090 nt1.58□□□□□ -2.16
TY2A-LR1P0C2J4 YLL054CYLL054C 2532 nt1.58□□□□□ -2.16
TY2A-LR1P0C2J4 PTP2YOR208W 2253 nt1.57□□□□□ -2.16
TY2A-LR1P0C2J4 COG4YPR105C 2586 nt1.57□□□□□ -2.16
TY2A-LR1P0C2J4 YOR093CYOR093C 4947 nt1.57□□□□□ -2.16
TY2A-LR1P0C2J4 DNF3YMR162C 4971 nt1.57□□□□□ -2.16
TY2A-LR1P0C2J4 HMRA2YCR096C 360 nt1.57□□□□□ -2.16
TY2A-LR1P0C2J4 YGR069WYGR069W 336 nt1.57□□□□□ -2.16
TY2A-LR1P0C2J4 VPS55YJR044C 423 nt1.57□□□□□ -2.16
TY2A-LR1P0C2J4 KAP122YGL016W 3246 nt1.57□□□□□ -2.16
TY2A-LR1P0C2J4 VIK1YPL253C 1944 nt1.56□□□□□ -2.16
TY2A-LR1P0C2J4 YOR008C-AYOR008C-A 225 nt1.56□□□□□ -2.16
TY2A-LR1P0C2J4 RAD61YDR014W 1944 nt1.56□□□□□ -2.16
TY2A-LR1P0C2J4 PKH2YOL100W 3246 nt1.55□□□□□ -2.16
TY2A-LR1P0C2J4 VPS15YBR097W 4365 nt1.55□□□□□ -2.16
TY2A-LR1P0C2J4 YBL008W-AYBL008W-A 240 nt1.55□□□□□ -2.16
TY2A-LR1P0C2J4 YLL007CYLL007C 1998 nt1.55□□□□□ -2.16
TY2A-LR1P0C2J4 BRR2YER172C 6492 nt1.55□□□□□ -2.16
TY2A-LR1P0C2J4 tT(UGU)HtT(UGU)H 72 nt1.54□□□□□ -2.16
TY2A-LR1P0C2J4 INA22YIR024C 651 nt1.54□□□□□ -2.16
TY2A-LR1P0C2J4 COA6YMR244C-A 315 nt1.54□□□□□ -2.16
TY2A-LR1P0C2J4 YNL028WYNL028W 318 nt1.54□□□□□ -2.16
TY2A-LR1P0C2J4 CSE2YNR010W 450 nt1.54□□□□□ -2.16
TY2A-LR1P0C2J4 YLR419WYLR419W 4308 nt1.54□□□□□ -2.16
Retrieved 100 of 7,029 protein–RNA pairs in 57.2 ms