Protein–RNA interactions for Protein: Q07457

BRE1, E3 ubiquitin-protein ligase BRE1, yeastyeast

Known RBP Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
BRE1Q07457 YOR072W-AYOR072W-A 249 nt2.12□□□□□ -2.07
BRE1Q07457 YHL041WYHL041W 450 nt2.11□□□□□ -2.07
BRE1Q07457 tW(UCA)QtW(UCA)Q 74 nt2.11□□□□□ -2.07
BRE1Q07457 RPL40BYKR094C 387 nt2.11□□□□□ -2.07
BRE1Q07457 PAC1YOR269W 1485 nt2.11□□□□□ -2.07
BRE1Q07457 YLR422WYLR422W 5799 nt2.11□□□□□ -2.07
BRE1Q07457 MAK10YEL053C 2202 nt2.1□□□□□ -2.07
BRE1Q07457 SAR1YPL218W 573 nt2.1□□□□□ -2.07
BRE1Q07457 AGC1YPR021C 2709 nt2.1□□□□□ -2.07
BRE1Q07457 CTR9YOL145C 3234 nt2.1□□□□□ -2.07
BRE1Q07457 PXA2YKL188C 2562 nt2.09□□□□□ -2.07
BRE1Q07457 KIP1YBL063W 3336 nt2.09□□□□□ -2.07
BRE1Q07457 SLY1YDR189W 2001 nt2.09□□□□□ -2.07
BRE1Q07457 SGO1YOR073W 1773 nt2.09□□□□□ -2.07
BRE1Q07457 YCL046WYCL046W 324 nt2.09□□□□□ -2.07
BRE1Q07457 FRK1YPL141C 2598 nt2.09□□□□□ -2.07
BRE1Q07457 OSH6YKR003W 1347 nt2.09□□□□□ -2.08
BRE1Q07457 NOP53YPL146C 1368 nt2.09□□□□□ -2.08
BRE1Q07457 YGR250CYGR250C 2346 nt2.08□□□□□ -2.08
BRE1Q07457 HMI1YOL095C 2121 nt2.08□□□□□ -2.08
BRE1Q07457 YER088C-AYER088C-A 324 nt2.08□□□□□ -2.08
BRE1Q07457 tT(UGU)HtT(UGU)H 72 nt2.08□□□□□ -2.08
BRE1Q07457 MCM22YJR135C 720 nt2.08□□□□□ -2.08
BRE1Q07457 PAU18YLL064C 363 nt2.08□□□□□ -2.08
BRE1Q07457 YMR247W-AYMR247W-A 144 nt2.08□□□□□ -2.08
BRE1Q07457 PAU6YNR076W 363 nt2.08□□□□□ -2.08
BRE1Q07457 MSH6YDR097C 3729 nt2.08□□□□□ -2.08
BRE1Q07457 RTP1YMR185W 2946 nt2.07□□□□□ -2.08
BRE1Q07457 YAF9YNL107W 681 nt2.07□□□□□ -2.08
BRE1Q07457 TIM18YOR297C 579 nt2.07□□□□□ -2.08
BRE1Q07457 ZIP1YDR285W 2628 nt2.07□□□□□ -2.08
BRE1Q07457 LRE1YCL051W 1752 nt2.06□□□□□ -2.08
BRE1Q07457 ZRG17YNR039C 1818 nt2.06□□□□□ -2.08
BRE1Q07457 CYC7YEL039C 342 nt2.06□□□□□ -2.08
BRE1Q07457 YGR265WYGR265W 411 nt2.06□□□□□ -2.08
BRE1Q07457 MRPL31YKL138C 396 nt2.06□□□□□ -2.08
BRE1Q07457 YOP1YPR028W 543 nt2.06□□□□□ -2.08
BRE1Q07457 YBP1YBR216C 2025 nt2.06□□□□□ -2.08
BRE1Q07457 CFT1YDR301W 4074 nt2.06□□□□□ -2.08
BRE1Q07457 YKL118WYKL118W 312 nt2.05□□□□□ -2.08
BRE1Q07457 RKM1YPL208W 1752 nt2.05□□□□□ -2.08
BRE1Q07457 YPL225WYPL225W 441 nt2.04□□□□□ -2.08
BRE1Q07457 YSY6YBR162W-A 198 nt2.04□□□□□ -2.08
BRE1Q07457 RFX1YLR176C 2436 nt2.03□□□□□ -2.08
BRE1Q07457 YOR019WYOR019W 2193 nt2.03□□□□□ -2.08
BRE1Q07457 MUK1YPL070W 1839 nt2.03□□□□□ -2.08
BRE1Q07457 YMR045CYMR045C 5268 nt2.03□□□□□ -2.08
BRE1Q07457 YHR210CYHR210C 1026 nt2.03□□□□□ -2.08
BRE1Q07457 UPS1YLR193C 528 nt2.03□□□□□ -2.08
BRE1Q07457 NUT2YPR168W 474 nt2.03□□□□□ -2.08
BRE1Q07457 LYS14YDR034C 2373 nt2.03□□□□□ -2.08
BRE1Q07457 MSC6YOR354C 2079 nt2.02□□□□□ -2.09
BRE1Q07457 ADR1YDR216W 3972 nt2.02□□□□□ -2.09
BRE1Q07457 RIM20YOR275C 1986 nt2.02□□□□□ -2.09
BRE1Q07457 ABM1YJR108W 372 nt2.02□□□□□ -2.09
BRE1Q07457 RPB10YOR210W 213 nt2.02□□□□□ -2.09
BRE1Q07457 RLM1YPL089C 2031 nt2.01□□□□□ -2.09
BRE1Q07457 IRC20YLR247C 4671 nt2.01□□□□□ -2.09
BRE1Q07457 YDR003W-AYDR003W-A 123 nt2□□□□□ -2.09
BRE1Q07457 YDR102CYDR102C 333 nt2□□□□□ -2.09
BRE1Q07457 TRX1YLR043C 312 nt2□□□□□ -2.09
BRE1Q07457 YML007C-AYML007C-A 111 nt2□□□□□ -2.09
BRE1Q07457 CSN9YDR179C 489 nt1.99□□□□□ -2.09
BRE1Q07457 PCC1YKR095W-A 267 nt1.99□□□□□ -2.09
BRE1Q07457 YMR230W-AYMR230W-A 189 nt1.99□□□□□ -2.09
BRE1Q07457 SPO24YPR036W-A 204 nt1.99□□□□□ -2.09
BRE1Q07457 snR36snR36 182 nt1.99□□□□□ -2.09
BRE1Q07457 snR51snR51 107 nt1.99□□□□□ -2.09
BRE1Q07457 SKI3YPR189W 4299 nt1.99□□□□□ -2.09
BRE1Q07457 CTF4YPR135W 2784 nt1.98□□□□□ -2.09
BRE1Q07457 NUP192YJL039C 5052 nt1.98□□□□□ -2.09
BRE1Q07457 RPL31AYDL075W 342 nt1.98□□□□□ -2.09
BRE1Q07457 RPL38YLR325C 237 nt1.98□□□□□ -2.09
BRE1Q07457 YNL146WYNL146W 303 nt1.98□□□□□ -2.09
BRE1Q07457 TRM3YDL112W 4311 nt1.98□□□□□ -2.09
BRE1Q07457 HSL1YKL101W 4557 nt1.98□□□□□ -2.09
BRE1Q07457 MDM20YOL076W 2391 nt1.98□□□□□ -2.09
BRE1Q07457 MLH3YPL164C 2148 nt1.97□□□□□ -2.09
BRE1Q07457 HIR3YJR140C 4947 nt1.97□□□□□ -2.09
BRE1Q07457 YDR413CYDR413C 576 nt1.97□□□□□ -2.09
BRE1Q07457 YHL037CYHL037C 402 nt1.97□□□□□ -2.09
BRE1Q07457 HTB2YBL002W 396 nt1.97□□□□□ -2.09
BRE1Q07457 SAS3YBL052C 2496 nt1.97□□□□□ -2.09
BRE1Q07457 YLR035C-AYLR035C-A 3468 nt1.97□□□□□ -2.09
BRE1Q07457 MSH5YDL154W 2706 nt1.97□□□□□ -2.09
BRE1Q07457 PMD1YER132C 5262 nt1.97□□□□□ -2.09
BRE1Q07457 SFB2YNL049C 2631 nt1.96□□□□□ -2.1
BRE1Q07457 TBS1YBR150C 3285 nt1.96□□□□□ -2.1
BRE1Q07457 RPL35AYDL191W 363 nt1.96□□□□□ -2.1
BRE1Q07457 NHP2YDL208W 471 nt1.96□□□□□ -2.1
BRE1Q07457 YDR426CYDR426C 378 nt1.96□□□□□ -2.1
BRE1Q07457 YHR007C-AYHR007C-A 216 nt1.96□□□□□ -2.1
BRE1Q07457 YMR141W-AYMR141W-A 225 nt1.96□□□□□ -2.1
BRE1Q07457 YLL032CYLL032C 2478 nt1.96□□□□□ -2.1
BRE1Q07457 SRP14YDL092W 441 nt1.95□□□□□ -2.1
BRE1Q07457 YDR169C-AYDR169C-A 150 nt1.95□□□□□ -2.1
BRE1Q07457 MEC1YBR136W 7107 nt1.95□□□□□ -2.1
BRE1Q07457 INP2YMR163C 2118 nt1.94□□□□□ -2.1
BRE1Q07457 YFL032WYFL032W 321 nt1.94□□□□□ -2.1
BRE1Q07457 TAR1YLR154W-C 375 nt1.94□□□□□ -2.1
Retrieved 100 of 7,029 protein–RNA pairs in 45.9 ms