Protein–RNA interactions for Protein: Q02260

SMD1, Small nuclear ribonucleoprotein Sm D1, yeastyeast

Predicted RBP Predictions only

Length 146 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SMD1Q02260 YOR121CYOR121C 306 nt1.24□□□□□ -2.21
SMD1Q02260 YPL229WYPL229W 621 nt1.24□□□□□ -2.21
SMD1Q02260 YPR012WYPR012W 255 nt1.24□□□□□ -2.21
SMD1Q02260 MSH5YDL154W 2706 nt1.24□□□□□ -2.21
SMD1Q02260 ZIP1YDR285W 2628 nt1.24□□□□□ -2.21
SMD1Q02260 ADR1YDR216W 3972 nt1.24□□□□□ -2.21
SMD1Q02260 RKM1YPL208W 1752 nt1.24□□□□□ -2.21
SMD1Q02260 CHS1YNL192W 3396 nt1.24□□□□□ -2.21
SMD1Q02260 LYS14YDR034C 2373 nt1.23□□□□□ -2.21
SMD1Q02260 HMRA1YCR097W 381 nt1.23□□□□□ -2.21
SMD1Q02260 YEL057CYEL057C 702 nt1.23□□□□□ -2.21
SMD1Q02260 YGR174W-AYGR174W-A 87 nt1.23□□□□□ -2.21
SMD1Q02260 HIT1YJR055W 495 nt1.23□□□□□ -2.21
SMD1Q02260 YML003WYML003W 873 nt1.23□□□□□ -2.21
SMD1Q02260 YMR141W-AYMR141W-A 225 nt1.23□□□□□ -2.21
SMD1Q02260 YPL261CYPL261C 309 nt1.23□□□□□ -2.21
SMD1Q02260 EFR3YMR212C 2349 nt1.23□□□□□ -2.21
SMD1Q02260 RTR1YER139C 681 nt1.22□□□□□ -2.21
SMD1Q02260 YIL059CYIL059C 366 nt1.22□□□□□ -2.21
SMD1Q02260 SPO24YPR036W-A 204 nt1.22□□□□□ -2.21
SMD1Q02260 SLN1YIL147C 3663 nt1.22□□□□□ -2.21
SMD1Q02260 YBR174CYBR174C 315 nt1.21□□□□□ -2.22
SMD1Q02260 SPC110YDR356W 2835 nt1.21□□□□□ -2.22
SMD1Q02260 PMD1YER132C 5262 nt1.21□□□□□ -2.22
SMD1Q02260 RFX1YLR176C 2436 nt1.2□□□□□ -2.22
SMD1Q02260 PAC1YOR269W 1485 nt1.2□□□□□ -2.22
SMD1Q02260 IRC23YOR044W 474 nt1.2□□□□□ -2.22
SMD1Q02260 MLH3YPL164C 2148 nt1.2□□□□□ -2.22
SMD1Q02260 SFB2YNL049C 2631 nt1.19□□□□□ -2.22
SMD1Q02260 snR56snR56 88 nt1.19□□□□□ -2.22
SMD1Q02260 YPP1YGR198W 2454 nt1.19□□□□□ -2.22
SMD1Q02260 YHL037CYHL037C 402 nt1.19□□□□□ -2.22
SMD1Q02260 MRPL31YKL138C 396 nt1.19□□□□□ -2.22
SMD1Q02260 UPS1YLR193C 528 nt1.19□□□□□ -2.22
SMD1Q02260 SKI3YPR189W 4299 nt1.19□□□□□ -2.22
SMD1Q02260 SXM1YDR395W 2835 nt1.18□□□□□ -2.22
SMD1Q02260 FAB1YFR019W 6837 nt1.18□□□□□ -2.22
SMD1Q02260 PAU2YEL049W 363 nt1.18□□□□□ -2.22
SMD1Q02260 YOL159C-AYOL159C-A 273 nt1.18□□□□□ -2.22
SMD1Q02260 ATG11YPR049C 3537 nt1.18□□□□□ -2.22
SMD1Q02260 SMC4YLR086W 4257 nt1.18□□□□□ -2.22
SMD1Q02260 YLL032CYLL032C 2478 nt1.17□□□□□ -2.22
SMD1Q02260 POL5YEL055C 3069 nt1.17□□□□□ -2.22
SMD1Q02260 CTF4YPR135W 2784 nt1.17□□□□□ -2.22
SMD1Q02260 YJL022WYJL022W 309 nt1.17□□□□□ -2.22
SMD1Q02260 YAR053WYAR053W 297 nt1.17□□□□□ -2.22
SMD1Q02260 NUT2YPR168W 474 nt1.17□□□□□ -2.22
SMD1Q02260 SSK2YNR031C 4740 nt1.17□□□□□ -2.22
SMD1Q02260 YJR003CYJR003C 1560 nt1.17□□□□□ -2.22
SMD1Q02260 SEC5YDR166C 2916 nt1.16□□□□□ -2.22
SMD1Q02260 AI5_ALPHAQ0070 1893 nt1.16□□□□□ -2.22
SMD1Q02260 TBS1YBR150C 3285 nt1.16□□□□□ -2.22
SMD1Q02260 GIM4YEL003W 336 nt1.16□□□□□ -2.22
SMD1Q02260 YHR175W-AYHR175W-A 150 nt1.16□□□□□ -2.22
SMD1Q02260 YOR029WYOR029W 336 nt1.16□□□□□ -2.22
SMD1Q02260 YOR072W-AYOR072W-A 249 nt1.16□□□□□ -2.22
SMD1Q02260 YBR012CYBR012C 420 nt1.16□□□□□ -2.22
SMD1Q02260 RPB10YOR210W 213 nt1.16□□□□□ -2.22
SMD1Q02260 snR51snR51 107 nt1.16□□□□□ -2.22
SMD1Q02260 SLY1YDR189W 2001 nt1.16□□□□□ -2.22
SMD1Q02260 RAD50YNL250W 3939 nt1.16□□□□□ -2.22
SMD1Q02260 MVP1YMR004W 1536 nt1.15□□□□□ -2.22
SMD1Q02260 DGR2YKL121W 2559 nt1.15□□□□□ -2.22
SMD1Q02260 YGR035CYGR035C 351 nt1.15□□□□□ -2.23
SMD1Q02260 tW(UCA)QtW(UCA)Q 74 nt1.15□□□□□ -2.23
SMD1Q02260 YJL135WYJL135W 318 nt1.15□□□□□ -2.23
SMD1Q02260 COF1YLL050C 432 nt1.15□□□□□ -2.23
SMD1Q02260 FYV8YGR196C 2454 nt1.14□□□□□ -2.23
SMD1Q02260 CCH1YGR217W 6120 nt1.14□□□□□ -2.23
SMD1Q02260 YDR182W-AYDR182W-A 204 nt1.14□□□□□ -2.23
SMD1Q02260 YLR140WYLR140W 327 nt1.14□□□□□ -2.23
SMD1Q02260 MUK1YPL070W 1839 nt1.14□□□□□ -2.23
SMD1Q02260 SAS3YBL052C 2496 nt1.14□□□□□ -2.23
SMD1Q02260 PET127YOR017W 2403 nt1.14□□□□□ -2.23
SMD1Q02260 YBP1YBR216C 2025 nt1.13□□□□□ -2.23
SMD1Q02260 PIG1YLR273C 1947 nt1.13□□□□□ -2.23
SMD1Q02260 ALK1YGL021W 2283 nt1.13□□□□□ -2.23
SMD1Q02260 snR72snR72 98 nt1.13□□□□□ -2.23
SMD1Q02260 tR(ACG)Q2tR(ACG)Q2 74 nt1.13□□□□□ -2.23
SMD1Q02260 YNL058CYNL058C 951 nt1.13□□□□□ -2.23
SMD1Q02260 KCS1YDR017C 3153 nt1.13□□□□□ -2.23
SMD1Q02260 SGO1YOR073W 1773 nt1.13□□□□□ -2.23
SMD1Q02260 YLR422WYLR422W 5799 nt1.12□□□□□ -2.23
SMD1Q02260 HKR1YDR420W 5409 nt1.12□□□□□ -2.23
SMD1Q02260 CSN9YDR179C 489 nt1.12□□□□□ -2.23
SMD1Q02260 EMC5YIL027C 426 nt1.12□□□□□ -2.23
SMD1Q02260 RPL40BYKR094C 387 nt1.12□□□□□ -2.23
SMD1Q02260 YPR016W-AYPR016W-A 261 nt1.12□□□□□ -2.23
SMD1Q02260 SEC21YNL287W 2808 nt1.12□□□□□ -2.23
SMD1Q02260 PIK1YNL267W 3201 nt1.12□□□□□ -2.23
SMD1Q02260 CFT1YDR301W 4074 nt1.11□□□□□ -2.23
SMD1Q02260 UFD2YDL190C 2886 nt1.11□□□□□ -2.23
SMD1Q02260 SLX4YLR135W 2247 nt1.11□□□□□ -2.23
SMD1Q02260 ATP6Q0085 780 nt1.11□□□□□ -2.23
SMD1Q02260 YGL217CYGL217C 342 nt1.11□□□□□ -2.23
SMD1Q02260 YHL046W-AYHL046W-A 327 nt1.11□□□□□ -2.23
SMD1Q02260 YAL063C-AYAL063C-A 291 nt1.11□□□□□ -2.23
SMD1Q02260 SDH2YLL041C 801 nt1.11□□□□□ -2.23
SMD1Q02260 BIL1YOR304C-A 231 nt1.11□□□□□ -2.23
SMD1Q02260 YOR376WYOR376W 369 nt1.11□□□□□ -2.23
Retrieved 100 of 7,029 protein–RNA pairs in 39.9 ms