Protein–RNA interactions for Protein: P53538

SSU72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, yeastyeast

Predicted RBP Predictions only

Length 206 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SSU72P53538 YJL022WYJL022W 309 nt1.15□□□□□ -2.23
SSU72P53538 VPS55YJR044C 423 nt1.15□□□□□ -2.23
SSU72P53538 YLR255CYLR255C 354 nt1.15□□□□□ -2.23
SSU72P53538 YCL046WYCL046W 324 nt1.15□□□□□ -2.23
SSU72P53538 HDA3YPR179C 1968 nt1.15□□□□□ -2.23
SSU72P53538 YLR419WYLR419W 4308 nt1.15□□□□□ -2.23
SSU72P53538 OSH6YKR003W 1347 nt1.15□□□□□ -2.23
SSU72P53538 MSH3YCR092C 3057 nt1.14□□□□□ -2.23
SSU72P53538 PMD1YER132C 5262 nt1.14□□□□□ -2.23
SSU72P53538 YDR114CYDR114C 303 nt1.14□□□□□ -2.23
SSU72P53538 VAR1Q0140 1197 nt1.14□□□□□ -2.23
SSU72P53538 UBC7YMR022W 498 nt1.14□□□□□ -2.23
SSU72P53538 MRPL50YNR022C 420 nt1.14□□□□□ -2.23
SSU72P53538 CDC31YOR257W 486 nt1.14□□□□□ -2.23
SSU72P53538 DCP2YNL118C 2913 nt1.14□□□□□ -2.23
SSU72P53538 YDL011CYDL011C 324 nt1.13□□□□□ -2.23
SSU72P53538 RTT102YGR275W 474 nt1.13□□□□□ -2.23
SSU72P53538 RPL32YBL092W 393 nt1.13□□□□□ -2.23
SSU72P53538 YOL159CYOL159C 516 nt1.13□□□□□ -2.23
SSU72P53538 ZRG17YNR039C 1818 nt1.12□□□□□ -2.23
SSU72P53538 RPS24BYIL069C 408 nt1.12□□□□□ -2.23
SSU72P53538 YLR146W-AYLR146W-A 189 nt1.12□□□□□ -2.23
SSU72P53538 GUP1YGL084C 1683 nt1.12□□□□□ -2.23
SSU72P53538 LAA1YJL207C 6045 nt1.11□□□□□ -2.23
SSU72P53538 WIP1YDR374W-A 270 nt1.11□□□□□ -2.23
SSU72P53538 AGA2YGL032C 264 nt1.11□□□□□ -2.23
SSU72P53538 TIM13YGR181W 318 nt1.11□□□□□ -2.23
SSU72P53538 RPS27AYKL156W 249 nt1.11□□□□□ -2.23
SSU72P53538 COF1YLL050C 432 nt1.11□□□□□ -2.23
SSU72P53538 HHT1YBR010W 411 nt1.11□□□□□ -2.23
SSU72P53538 YPL185WYPL185W 396 nt1.11□□□□□ -2.23
SSU72P53538 KIP1YBL063W 3336 nt1.11□□□□□ -2.23
SSU72P53538 TRM732YMR259C 4263 nt1.11□□□□□ -2.23
SSU72P53538 SWI6YLR182W 2412 nt1.1□□□□□ -2.23
SSU72P53538 YDR003W-AYDR003W-A 123 nt1.1□□□□□ -2.23
SSU72P53538 PHS1YJL097W 654 nt1.1□□□□□ -2.23
SSU72P53538 YSY6YBR162W-A 198 nt1.1□□□□□ -2.23
SSU72P53538 APL1YJR005W 2103 nt1.1□□□□□ -2.23
SSU72P53538 ZIP1YDR285W 2628 nt1.1□□□□□ -2.23
SSU72P53538 PXA2YKL188C 2562 nt1.09□□□□□ -2.23
SSU72P53538 CDC25YLR310C 4770 nt1.09□□□□□ -2.23
SSU72P53538 RPL9BYNL067W 576 nt1.09□□□□□ -2.23
SSU72P53538 YOP1YPR028W 543 nt1.09□□□□□ -2.23
SSU72P53538 SPO23YBR250W 1572 nt1.08□□□□□ -2.24
SSU72P53538 YNL284C-BYNL284C-B 5268 nt1.08□□□□□ -2.24
SSU72P53538 SWF1YDR126W 1011 nt1.08□□□□□ -2.24
SSU72P53538 YEL057CYEL057C 702 nt1.08□□□□□ -2.24
SSU72P53538 PRE4YFR050C 801 nt1.08□□□□□ -2.24
SSU72P53538 YAR047CYAR047C 321 nt1.08□□□□□ -2.24
SSU72P53538 YMR001C-AYMR001C-A 231 nt1.08□□□□□ -2.24
SSU72P53538 VAM6YDL077C 3150 nt1.08□□□□□ -2.24
SSU72P53538 AZF1YOR113W 2745 nt1.08□□□□□ -2.24
SSU72P53538 DGR2YKL121W 2559 nt1.07□□□□□ -2.24
SSU72P53538 LYS14YDR034C 2373 nt1.07□□□□□ -2.24
SSU72P53538 YER079WYER079W 633 nt1.07□□□□□ -2.24
SSU72P53538 YJL020W-AYJL020W-A 258 nt1.07□□□□□ -2.24
SSU72P53538 YKL202WYKL202W 582 nt1.07□□□□□ -2.24
SSU72P53538 YPR063CYPR063C 423 nt1.07□□□□□ -2.24
SSU72P53538 YBR285WYBR285W 435 nt1.07□□□□□ -2.24
SSU72P53538 AIM9YER080W 1884 nt1.07□□□□□ -2.24
SSU72P53538 MVP1YMR004W 1536 nt1.06□□□□□ -2.24
SSU72P53538 SMC4YLR086W 4257 nt1.06□□□□□ -2.24
SSU72P53538 SRP14YDL092W 441 nt1.06□□□□□ -2.24
SSU72P53538 YDR269CYDR269C 324 nt1.06□□□□□ -2.24
SSU72P53538 tH(GUG)E1tH(GUG)E1 72 nt1.06□□□□□ -2.24
SSU72P53538 tH(GUG)E2tH(GUG)E2 72 nt1.06□□□□□ -2.24
SSU72P53538 tH(GUG)G1tH(GUG)G1 72 nt1.06□□□□□ -2.24
SSU72P53538 tH(GUG)G2tH(GUG)G2 72 nt1.06□□□□□ -2.24
SSU72P53538 tH(GUG)HtH(GUG)H 72 nt1.06□□□□□ -2.24
SSU72P53538 tH(GUG)KtH(GUG)K 72 nt1.06□□□□□ -2.24
SSU72P53538 tH(GUG)MtH(GUG)M 72 nt1.06□□□□□ -2.24
SSU72P53538 RTR1YER139C 681 nt1.06□□□□□ -2.24
SSU72P53538 YHL037CYHL037C 402 nt1.06□□□□□ -2.24
SSU72P53538 YIL059CYIL059C 366 nt1.06□□□□□ -2.24
SSU72P53538 YLR434CYLR434C 384 nt1.06□□□□□ -2.24
SSU72P53538 HCH1YNL281W 462 nt1.06□□□□□ -2.24
SSU72P53538 YPL229WYPL229W 621 nt1.06□□□□□ -2.24
SSU72P53538 UFD2YDL190C 2886 nt1.06□□□□□ -2.24
SSU72P53538 EFR3YMR212C 2349 nt1.06□□□□□ -2.24
SSU72P53538 ROM2YLR371W 4071 nt1.06□□□□□ -2.24
SSU72P53538 SEC5YDR166C 2916 nt1.05□□□□□ -2.24
SSU72P53538 YAP6YDR259C 1152 nt1.05□□□□□ -2.24
SSU72P53538 EMT1tM(CAU)D 73 nt1.05□□□□□ -2.24
SSU72P53538 EMT5tM(CAU)J1 73 nt1.05□□□□□ -2.24
SSU72P53538 EMT3tM(CAU)J2 73 nt1.05□□□□□ -2.24
SSU72P53538 EMT4tM(CAU)M 73 nt1.05□□□□□ -2.24
SSU72P53538 EMT2tM(CAU)O2 73 nt1.05□□□□□ -2.24
SSU72P53538 YLR154W-FYLR154W-F 141 nt1.05□□□□□ -2.24
SSU72P53538 YML003WYML003W 873 nt1.05□□□□□ -2.24
SSU72P53538 RRT1YBL048W 312 nt1.05□□□□□ -2.24
SSU72P53538 YOR376WYOR376W 369 nt1.05□□□□□ -2.24
SSU72P53538 LEE1YPL054W 906 nt1.05□□□□□ -2.24
SSU72P53538 RFX1YLR176C 2436 nt1.05□□□□□ -2.24
SSU72P53538 PCF11YDR228C 1881 nt1.04□□□□□ -2.24
SSU72P53538 EMC5YIL027C 426 nt1.04□□□□□ -2.24
SSU72P53538 HIT1YJR055W 495 nt1.04□□□□□ -2.24
SSU72P53538 RPL26AYLR344W 384 nt1.04□□□□□ -2.24
SSU72P53538 YOR053WYOR053W 342 nt1.04□□□□□ -2.24
SSU72P53538 SLY1YDR189W 2001 nt1.03□□□□□ -2.24
SSU72P53538 CYC7YEL039C 342 nt1.03□□□□□ -2.24
Retrieved 100 of 7,029 protein–RNA pairs in 68.2 ms