Protein–RNA interactions for Protein: P45978

SCD6, Protein SCD6, yeastyeast

Known RBP RIP-Chip data

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SCD6P45978 MGA2YIR033W 3342 nt1.8□□□□□ -2.12
SCD6P45978 PLC1YPL268W 2610 nt1.8□□□□□ -2.12
SCD6P45978 CSN9YDR179C 489 nt1.8□□□□□ -2.12
SCD6P45978 YFL032WYFL032W 321 nt1.8□□□□□ -2.12
SCD6P45978 YHR007C-AYHR007C-A 216 nt1.8□□□□□ -2.12
SCD6P45978 MAM33YIL070C 801 nt1.8□□□□□ -2.12
SCD6P45978 YMR031W-AYMR031W-A 327 nt1.8□□□□□ -2.12
SCD6P45978 SAR1YPL218W 573 nt1.8□□□□□ -2.12
SCD6P45978 EFR3YMR212C 2349 nt1.8□□□□□ -2.12
SCD6P45978 PXA2YKL188C 2562 nt1.8□□□□□ -2.12 RIP-Chip
SCD6P45978 CFT2YLR115W 2580 nt1.8□□□□□ -2.12
SCD6P45978 SWI5YDR146C 2130 nt1.79□□□□□ -2.12 RIP-Chip
SCD6P45978 NUP192YJL039C 5052 nt1.79□□□□□ -2.12 RIP-Chip
SCD6P45978 NOP53YPL146C 1368 nt1.79□□□□□ -2.12
SCD6P45978 HSH155YMR288W 2916 nt1.79□□□□□ -2.12
SCD6P45978 HER1YOR227W 3741 nt1.79□□□□□ -2.12
SCD6P45978 BPH1YCR032W 6504 nt1.79□□□□□ -2.12
SCD6P45978 SFB2YNL049C 2631 nt1.78□□□□□ -2.12
SCD6P45978 SWI6YLR182W 2412 nt1.78□□□□□ -2.12 RIP-Chip
SCD6P45978 OSH6YKR003W 1347 nt1.78□□□□□ -2.12
SCD6P45978 RPL35AYDL191W 363 nt1.78□□□□□ -2.12
SCD6P45978 COA6YMR244C-A 315 nt1.78□□□□□ -2.12 RIP-Chip
SCD6P45978 NUT2YPR168W 474 nt1.78□□□□□ -2.12
SCD6P45978 HDA3YPR179C 1968 nt1.78□□□□□ -2.13 RIP-Chip
SCD6P45978 TFC8YPL007C 1767 nt1.77□□□□□ -2.13 RIP-Chip
SCD6P45978 PAU18YLL064C 363 nt1.77□□□□□ -2.13 RIP-Chip
SCD6P45978 TMA7YLR262C-A 195 nt1.77□□□□□ -2.13
SCD6P45978 PAU6YNR076W 363 nt1.77□□□□□ -2.13 RIP-Chip
SCD6P45978 YCR087C-AYCR087C-A 462 nt1.76□□□□□ -2.13
SCD6P45978 YDR169C-AYDR169C-A 150 nt1.76□□□□□ -2.13
SCD6P45978 YDR183C-AYDR183C-A 258 nt1.76□□□□□ -2.13
SCD6P45978 CYC7YEL039C 342 nt1.76□□□□□ -2.13
SCD6P45978 RPL39YJL189W 156 nt1.76□□□□□ -2.13
SCD6P45978 MCM22YJR135C 720 nt1.76□□□□□ -2.13 RIP-Chip
SCD6P45978 YMR193C-AYMR193C-A 387 nt1.76□□□□□ -2.13
SCD6P45978 FMP23YBR047W 528 nt1.76□□□□□ -2.13
SCD6P45978 MYO4YAL029C 4416 nt1.75□□□□□ -2.13 RIP-Chip
SCD6P45978 TAR1YLR154W-C 375 nt1.75□□□□□ -2.13
SCD6P45978 UPS1YLR193C 528 nt1.75□□□□□ -2.13
SCD6P45978 HTB2YBL002W 396 nt1.75□□□□□ -2.13 RIP-Chip
SCD6P45978 YCL046WYCL046W 324 nt1.75□□□□□ -2.13
SCD6P45978 IRC20YLR247C 4671 nt1.75□□□□□ -2.13 RIP-Chip
SCD6P45978 RIM20YOR275C 1986 nt1.74□□□□□ -2.13 RIP-Chip
SCD6P45978 VPS15YBR097W 4365 nt1.74□□□□□ -2.13 RIP-Chip
SCD6P45978 RPL38YLR325C 237 nt1.74□□□□□ -2.13
SCD6P45978 YML099W-AYML099W-A 330 nt1.74□□□□□ -2.13
SCD6P45978 YOP1YPR028W 543 nt1.74□□□□□ -2.13
SCD6P45978 HCS1YKL017C 2052 nt1.74□□□□□ -2.13
SCD6P45978 YNL144CYNL144C 2223 nt1.74□□□□□ -2.13 RIP-Chip
SCD6P45978 ELG1YOR144C 2376 nt1.73□□□□□ -2.13 RIP-Chip
SCD6P45978 STE5YDR103W 2754 nt1.73□□□□□ -2.13 RIP-Chip
SCD6P45978 YER088C-AYER088C-A 324 nt1.73□□□□□ -2.13
SCD6P45978 YHR073W-AYHR073W-A 177 nt1.73□□□□□ -2.13
SCD6P45978 YMR141W-AYMR141W-A 225 nt1.73□□□□□ -2.13
SCD6P45978 DCP2YNL118C 2913 nt1.73□□□□□ -2.13 RIP-Chip
SCD6P45978 YER181CYER181C 324 nt1.72□□□□□ -2.13
SCD6P45978 YHR071C-AYHR071C-A 321 nt1.72□□□□□ -2.13
SCD6P45978 YML007C-AYML007C-A 111 nt1.72□□□□□ -2.13
SCD6P45978 RFX1YLR176C 2436 nt1.72□□□□□ -2.13 RIP-Chip
SCD6P45978 BRR2YER172C 6492 nt1.72□□□□□ -2.13
SCD6P45978 ZRG17YNR039C 1818 nt1.72□□□□□ -2.13 RIP-Chip
SCD6P45978 LYS14YDR034C 2373 nt1.72□□□□□ -2.13 RIP-Chip
SCD6P45978 IRE1YHR079C 3348 nt1.71□□□□□ -2.14 RIP-Chip
SCD6P45978 HSL1YKL101W 4557 nt1.71□□□□□ -2.14
SCD6P45978 MUK1YPL070W 1839 nt1.71□□□□□ -2.14
SCD6P45978 YFL063WYFL063W 456 nt1.71□□□□□ -2.14
SCD6P45978 YGR265WYGR265W 411 nt1.71□□□□□ -2.14
SCD6P45978 snR51snR51 107 nt1.71□□□□□ -2.14
SCD6P45978 SLY1YDR189W 2001 nt1.71□□□□□ -2.14 RIP-Chip
SCD6P45978 YDR003W-AYDR003W-A 123 nt1.7□□□□□ -2.14
SCD6P45978 YDR048CYDR048C 315 nt1.7□□□□□ -2.14
SCD6P45978 YIL115W-AYIL115W-A 372 nt1.7□□□□□ -2.14
SCD6P45978 PCC1YKR095W-A 267 nt1.7□□□□□ -2.14
SCD6P45978 MAK10YEL053C 2202 nt1.7□□□□□ -2.14
SCD6P45978 YGR250CYGR250C 2346 nt1.69□□□□□ -2.14
SCD6P45978 snR65snR65 100 nt1.69□□□□□ -2.14
SCD6P45978 YDR426CYDR426C 378 nt1.69□□□□□ -2.14
SCD6P45978 YOR231C-AYOR231C-A 201 nt1.69□□□□□ -2.14
SCD6P45978 MSC6YOR354C 2079 nt1.69□□□□□ -2.14 RIP-Chip
SCD6P45978 AGC1YPR021C 2709 nt1.69□□□□□ -2.14
SCD6P45978 FIG2YCR089W 4830 nt1.69□□□□□ -2.14 RIP-Chip
SCD6P45978 CTR9YOL145C 3234 nt1.68□□□□□ -2.14 RIP-Chip
SCD6P45978 MSH6YDR097C 3729 nt1.68□□□□□ -2.14 RIP-Chip
SCD6P45978 ZIP1YDR285W 2628 nt1.68□□□□□ -2.14
SCD6P45978 MVP1YMR004W 1536 nt1.68□□□□□ -2.14 RIP-Chip
SCD6P45978 NPC2YDL046W 522 nt1.68□□□□□ -2.14
SCD6P45978 RPB10YOR210W 213 nt1.68□□□□□ -2.14
SCD6P45978 YPR002C-AYPR002C-A 198 nt1.68□□□□□ -2.14
SCD6P45978 CAT8YMR280C 4302 nt1.67□□□□□ -2.14
SCD6P45978 YGL149WYGL149W 306 nt1.67□□□□□ -2.14
SCD6P45978 CDC31YOR257W 486 nt1.67□□□□□ -2.14
SCD6P45978 FRK1YPL141C 2598 nt1.67□□□□□ -2.14 RIP-Chip
SCD6P45978 INP2YMR163C 2118 nt1.67□□□□□ -2.14 RIP-Chip
SCD6P45978 YJR039WYJR039W 3366 nt1.67□□□□□ -2.14 RIP-Chip
SCD6P45978 CHS1YNL192W 3396 nt1.67□□□□□ -2.14 RIP-Chip
SCD6P45978 MEC1YBR136W 7107 nt1.66□□□□□ -2.14 RIP-Chip
SCD6P45978 YIL102CYIL102C 306 nt1.66□□□□□ -2.14
SCD6P45978 SBE22YHR103W 2559 nt1.66□□□□□ -2.14
SCD6P45978 MSH5YDL154W 2706 nt1.66□□□□□ -2.14 RIP-Chip
SCD6P45978 HMI1YOL095C 2121 nt1.66□□□□□ -2.14 RIP-Chip
Retrieved 100 of 7,029 protein–RNA pairs in 46.8 ms