Protein–RNA interactions for Protein: P43569

CAF16, CCR4-associated factor 16, yeastyeast

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CAF16P43569 RTT101YJL047C 2529 nt2.3□□□□□ -2.04
CAF16P43569 ZIP1YDR285W 2628 nt2.3□□□□□ -2.04
CAF16P43569 UBP15YMR304W 3693 nt2.29□□□□□ -2.04
CAF16P43569 YME2YMR302C 2553 nt2.29□□□□□ -2.04
CAF16P43569 YLL032CYLL032C 2478 nt2.29□□□□□ -2.04
CAF16P43569 MDM20YOL076W 2391 nt2.29□□□□□ -2.04
CAF16P43569 YOR343W-BYOR343W-B 5313 nt2.29□□□□□ -2.04
CAF16P43569 MRP10YDL045W-A 288 nt2.29□□□□□ -2.04
CAF16P43569 CSE2YNR010W 450 nt2.29□□□□□ -2.04
CAF16P43569 SPF1YEL031W 3648 nt2.29□□□□□ -2.04
CAF16P43569 DBP10YDL031W 2988 nt2.29□□□□□ -2.04
CAF16P43569 SEC26YDR238C 2922 nt2.28□□□□□ -2.04
CAF16P43569 UBP1YDL122W 2430 nt2.28□□□□□ -2.04
CAF16P43569 YMR046W-AYMR046W-A 129 nt2.28□□□□□ -2.04
CAF16P43569 TRA1YHR099W 11235 nt2.28□□□□□ -2.05
CAF16P43569 snR55snR55 98 nt2.27□□□□□ -2.05
CAF16P43569 YJL197C-AYJL197C-A 282 nt2.27□□□□□ -2.05
CAF16P43569 MAK10YEL053C 2202 nt2.27□□□□□ -2.05
CAF16P43569 RPO41YFL036W 4056 nt2.26□□□□□ -2.05
CAF16P43569 YPR097WYPR097W 3222 nt2.26□□□□□ -2.05
CAF16P43569 YER088C-AYER088C-A 324 nt2.26□□□□□ -2.05
CAF16P43569 YMR172C-AYMR172C-A 384 nt2.26□□□□□ -2.05
CAF16P43569 YNL337WYNL337W 255 nt2.26□□□□□ -2.05
CAF16P43569 YDR406W-AYDR406W-A 246 nt2.25□□□□□ -2.05
CAF16P43569 YGL052WYGL052W 306 nt2.25□□□□□ -2.05
CAF16P43569 YLR120W-AYLR120W-A 102 nt2.25□□□□□ -2.05
CAF16P43569 RSE1YML049C 4086 nt2.25□□□□□ -2.05
CAF16P43569 ARP8YOR141C 2646 nt2.25□□□□□ -2.05
CAF16P43569 IST2YBR086C 2841 nt2.24□□□□□ -2.05
CAF16P43569 VPS13YLL040C 9435 nt2.24□□□□□ -2.05
CAF16P43569 SAS3YBL052C 2496 nt2.24□□□□□ -2.05
CAF16P43569 YCR018C-AYCR018C-A 255 nt2.24□□□□□ -2.05
CAF16P43569 YCR087C-AYCR087C-A 462 nt2.24□□□□□ -2.05
CAF16P43569 tC(GCA)BtC(GCA)B 72 nt2.24□□□□□ -2.05
CAF16P43569 tC(GCA)GtC(GCA)G 72 nt2.24□□□□□ -2.05
CAF16P43569 tC(GCA)P1tC(GCA)P1 72 nt2.24□□□□□ -2.05
CAF16P43569 tC(GCA)P2tC(GCA)P2 72 nt2.24□□□□□ -2.05
CAF16P43569 INA22YIR024C 651 nt2.24□□□□□ -2.05
CAF16P43569 CSF1YLR087C 8877 nt2.24□□□□□ -2.05
CAF16P43569 SRP14YDL092W 441 nt2.23□□□□□ -2.05
CAF16P43569 YLR012CYLR012C 300 nt2.23□□□□□ -2.05
CAF16P43569 YMR321CYMR321C 318 nt2.23□□□□□ -2.05
CAF16P43569 YOR015WYOR015W 360 nt2.23□□□□□ -2.05
CAF16P43569 KOG1YHR186C 4674 nt2.23□□□□□ -2.05
CAF16P43569 COX14YML129C 213 nt2.22□□□□□ -2.05
CAF16P43569 YMR307C-AYMR307C-A 195 nt2.22□□□□□ -2.05
CAF16P43569 YOL160WYOL160W 342 nt2.22□□□□□ -2.05
CAF16P43569 MPT5YGL178W 2580 nt2.22□□□□□ -2.05
CAF16P43569 PDE2YOR360C 1581 nt2.22□□□□□ -2.05
CAF16P43569 SVL3YPL032C 2478 nt2.22□□□□□ -2.05
CAF16P43569 NIP100YPL174C 2607 nt2.21□□□□□ -2.05
CAF16P43569 SGS1YMR190C 4344 nt2.21□□□□□ -2.06
CAF16P43569 YPL150WYPL150W 2706 nt2.21□□□□□ -2.06
CAF16P43569 IRE1YHR079C 3348 nt2.21□□□□□ -2.06
CAF16P43569 MSC6YOR354C 2079 nt2.21□□□□□ -2.06
CAF16P43569 SPC98YNL126W 2541 nt2.21□□□□□ -2.06
CAF16P43569 PAU2YEL049W 363 nt2.21□□□□□ -2.06
CAF16P43569 YBL012CYBL012C 402 nt2.21□□□□□ -2.06
CAF16P43569 CTR9YOL145C 3234 nt2.21□□□□□ -2.06
CAF16P43569 HSH155YMR288W 2916 nt2.21□□□□□ -2.06
CAF16P43569 IRA2YOL081W 9240 nt2.2□□□□□ -2.06
CAF16P43569 CAT2YML042W 2013 nt2.2□□□□□ -2.06
CAF16P43569 ZIP2YGL249W 2115 nt2.2□□□□□ -2.06
CAF16P43569 HMI1YOL095C 2121 nt2.2□□□□□ -2.06
CAF16P43569 MSH5YDL154W 2706 nt2.19□□□□□ -2.06
CAF16P43569 YCK3YER123W 1575 nt2.19□□□□□ -2.06
CAF16P43569 NPR2YEL062W 1848 nt2.19□□□□□ -2.06
CAF16P43569 SKP2YNL311C 2292 nt2.19□□□□□ -2.06
CAF16P43569 HER1YOR227W 3741 nt2.19□□□□□ -2.06
CAF16P43569 YKL165C-AYKL165C-A 234 nt2.19□□□□□ -2.06
CAF16P43569 YMR230W-AYMR230W-A 189 nt2.19□□□□□ -2.06
CAF16P43569 YMR242W-AYMR242W-A 90 nt2.19□□□□□ -2.06
CAF16P43569 IES4YOR189W 351 nt2.19□□□□□ -2.06
CAF16P43569 MLH3YPL164C 2148 nt2.19□□□□□ -2.06
CAF16P43569 TOF1YNL273W 3717 nt2.18□□□□□ -2.06
CAF16P43569 VTC1YER072W 390 nt2.18□□□□□ -2.06
CAF16P43569 GPG1YGL121C 381 nt2.18□□□□□ -2.06
CAF16P43569 PFD1YJL179W 330 nt2.18□□□□□ -2.06
CAF16P43569 YOR108C-AYOR108C-A 210 nt2.18□□□□□ -2.06
CAF16P43569 VPS54YDR027C 2670 nt2.17□□□□□ -2.06
CAF16P43569 RLM1YPL089C 2031 nt2.17□□□□□ -2.06
CAF16P43569 AGC1YPR021C 2709 nt2.17□□□□□ -2.06
CAF16P43569 YDL118WYDL118W 381 nt2.17□□□□□ -2.06
CAF16P43569 YHR180W-AYHR180W-A 183 nt2.17□□□□□ -2.06
CAF16P43569 APQ12YIL040W 417 nt2.17□□□□□ -2.06
CAF16P43569 COA4YLR218C 453 nt2.17□□□□□ -2.06
CAF16P43569 JIP5YPR169W 1479 nt2.17□□□□□ -2.06
CAF16P43569 DNF1YER166W 4716 nt2.17□□□□□ -2.06
CAF16P43569 NEW1YPL226W 3591 nt2.16□□□□□ -2.06
CAF16P43569 MBB1YJL199C 327 nt2.16□□□□□ -2.06
CAF16P43569 YOR055WYOR055W 435 nt2.16□□□□□ -2.06
CAF16P43569 STH1YIL126W 4080 nt2.16□□□□□ -2.06
CAF16P43569 ENV11YGR071C 2583 nt2.16□□□□□ -2.06
CAF16P43569 YOL098CYOL098C 3114 nt2.16□□□□□ -2.06
CAF16P43569 PUT3YKL015W 2940 nt2.16□□□□□ -2.06
CAF16P43569 SAP185YJL098W 3177 nt2.16□□□□□ -2.06
CAF16P43569 PDR1YGL013C 3207 nt2.15□□□□□ -2.06
CAF16P43569 tF(GAA)QtF(GAA)Q 75 nt2.15□□□□□ -2.07
CAF16P43569 YOR218CYOR218C 420 nt2.15□□□□□ -2.07
CAF16P43569 FRK1YPL141C 2598 nt2.15□□□□□ -2.07
Retrieved 100 of 7,029 protein–RNA pairs in 54.9 ms