Protein–RNA interactions for Protein: P42947

YJL107C, Uncharacterized UPF0442 protein YJL107C, yeastyeast

Predictions only

Length 387 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
YJL107CP42947 YLR053CYLR053C 327 nt2.09□□□□□ -2.07
YJL107CP42947 YMR141W-AYMR141W-A 225 nt2.09□□□□□ -2.07
YJL107CP42947 RPL42AYNL162W 321 nt2.09□□□□□ -2.07
YJL107CP42947 YOR333CYOR333C 417 nt2.09□□□□□ -2.07
YJL107CP42947 NUT2YPR168W 474 nt2.09□□□□□ -2.07
YJL107CP42947 IST2YBR086C 2841 nt2.09□□□□□ -2.07
YJL107CP42947 GRR1YJR090C 3456 nt2.09□□□□□ -2.08
YJL107CP42947 EFR3YMR212C 2349 nt2.08□□□□□ -2.08
YJL107CP42947 YBL083CYBL083C 426 nt2.08□□□□□ -2.08
YJL107CP42947 USO1YDL058W 5373 nt2.08□□□□□ -2.08
YJL107CP42947 ATG11YPR049C 3537 nt2.07□□□□□ -2.08
YJL107CP42947 SSQ1YLR369W 1974 nt2.07□□□□□ -2.08
YJL107CP42947 YDR426CYDR426C 378 nt2.07□□□□□ -2.08
YJL107CP42947 YHL042WYHL042W 453 nt2.07□□□□□ -2.08
YJL107CP42947 PCC1YKR095W-A 267 nt2.07□□□□□ -2.08
YJL107CP42947 YML007C-AYML007C-A 111 nt2.07□□□□□ -2.08
YJL107CP42947 COS111YBR203W 2775 nt2.06□□□□□ -2.08
YJL107CP42947 PET309YLR067C 2898 nt2.06□□□□□ -2.08
YJL107CP42947 YEL020C-BYEL020C-B 198 nt2.06□□□□□ -2.08
YJL107CP42947 snR49snR49 165 nt2.06□□□□□ -2.08
YJL107CP42947 TRL1YJL087C 2484 nt2.06□□□□□ -2.08
YJL107CP42947 SET2YJL168C 2202 nt2.05□□□□□ -2.08
YJL107CP42947 snR60snR60 104 nt2.05□□□□□ -2.08
YJL107CP42947 YGL041CYGL041C 204 nt2.05□□□□□ -2.08
YJL107CP42947 MNE1YOR350C 1992 nt2.05□□□□□ -2.08
YJL107CP42947 GYP5YPL249C 2685 nt2.04□□□□□ -2.08
YJL107CP42947 CDC60YPL160W 3273 nt2.04□□□□□ -2.08
YJL107CP42947 YDL118WYDL118W 381 nt2.04□□□□□ -2.08
YJL107CP42947 YDR286CYDR286C 345 nt2.04□□□□□ -2.08
YJL107CP42947 EMP24YGL200C 612 nt2.04□□□□□ -2.08
YJL107CP42947 tM(CAU)Q1tM(CAU)Q1 76 nt2.04□□□□□ -2.08
YJL107CP42947 SLM1YIL105C 2061 nt2.04□□□□□ -2.08
YJL107CP42947 YKL183C-AYKL183C-A 213 nt2.04□□□□□ -2.08
YJL107CP42947 PXA2YKL188C 2562 nt2.04□□□□□ -2.08
YJL107CP42947 SDH2YLL041C 801 nt2.04□□□□□ -2.08
YJL107CP42947 YNL114CYNL114C 372 nt2.04□□□□□ -2.08
YJL107CP42947 YPR063CYPR063C 423 nt2.04□□□□□ -2.08
YJL107CP42947 CFT2YLR115W 2580 nt2.04□□□□□ -2.08
YJL107CP42947 COG8YML071C 1824 nt2.03□□□□□ -2.08
YJL107CP42947 RGA1YOR127W 3024 nt2.03□□□□□ -2.08
YJL107CP42947 YLR146W-AYLR146W-A 189 nt2.03□□□□□ -2.08
YJL107CP42947 YOR008C-AYOR008C-A 225 nt2.03□□□□□ -2.08
YJL107CP42947 YCL023CYCL023C 348 nt2.03□□□□□ -2.08
YJL107CP42947 RTT101YJL047C 2529 nt2.03□□□□□ -2.08
YJL107CP42947 YGR250CYGR250C 2346 nt2.02□□□□□ -2.09
YJL107CP42947 VPS8YAL002W 3825 nt2.02□□□□□ -2.09
YJL107CP42947 FKS1YLR342W 5631 nt2.02□□□□□ -2.09
YJL107CP42947 HCS1YKL017C 2052 nt2.02□□□□□ -2.09
YJL107CP42947 BUD2YKL092C 3315 nt2.02□□□□□ -2.09
YJL107CP42947 YCR018C-AYCR018C-A 255 nt2.02□□□□□ -2.09
YJL107CP42947 CDC36YDL165W 576 nt2.02□□□□□ -2.09
YJL107CP42947 YPR002C-AYPR002C-A 198 nt2.02□□□□□ -2.09
YJL107CP42947 MVP1YMR004W 1536 nt2.01□□□□□ -2.09
YJL107CP42947 SWI6YLR182W 2412 nt2.01□□□□□ -2.09
YJL107CP42947 ARP7YPR034W 1434 nt2.01□□□□□ -2.09
YJL107CP42947 BPH1YCR032W 6504 nt2.01□□□□□ -2.09
YJL107CP42947 YJL135WYJL135W 318 nt2.01□□□□□ -2.09
YJL107CP42947 YLR255CYLR255C 354 nt2.01□□□□□ -2.09
YJL107CP42947 ABF2YMR072W 552 nt2.01□□□□□ -2.09
YJL107CP42947 YBR064WYBR064W 429 nt2.01□□□□□ -2.09
YJL107CP42947 FAB1YFR019W 6837 nt2.01□□□□□ -2.09
YJL107CP42947 ELG1YOR144C 2376 nt2□□□□□ -2.09
YJL107CP42947 BLI1YKL061W 342 nt2□□□□□ -2.09
YJL107CP42947 YKR075W-AYKR075W-A 270 nt2□□□□□ -2.09
YJL107CP42947 YDR341CYDR341C 1824 nt2□□□□□ -2.09
YJL107CP42947 SWI5YDR146C 2130 nt2□□□□□ -2.09
YJL107CP42947 RPH1YER169W 2391 nt2□□□□□ -2.09
YJL107CP42947 YCR043CYCR043C 384 nt1.99□□□□□ -2.09
YJL107CP42947 YER172C-AYER172C-A 381 nt1.99□□□□□ -2.09
YJL107CP42947 TRX1YLR043C 312 nt1.99□□□□□ -2.09
YJL107CP42947 YNL337WYNL337W 255 nt1.99□□□□□ -2.09
YJL107CP42947 YOL155W-AYOL155W-A 135 nt1.99□□□□□ -2.09
YJL107CP42947 SCW11YGL028C 1629 nt1.99□□□□□ -2.09
YJL107CP42947 MUK1YPL070W 1839 nt1.98□□□□□ -2.09
YJL107CP42947 ATG9YDL149W 2994 nt1.97□□□□□ -2.09
YJL107CP42947 NAM7YMR080C 2916 nt1.97□□□□□ -2.09
YJL107CP42947 YHR073W-AYHR073W-A 177 nt1.97□□□□□ -2.09
YJL107CP42947 PAU18YLL064C 363 nt1.97□□□□□ -2.09
YJL107CP42947 YBL012CYBL012C 402 nt1.97□□□□□ -2.09
YJL107CP42947 PAU6YNR076W 363 nt1.97□□□□□ -2.09
YJL107CP42947 RPB10YOR210W 213 nt1.97□□□□□ -2.09
YJL107CP42947 YHR214C-BYHR214C-B 5382 nt1.97□□□□□ -2.09
YJL107CP42947 INP2YMR163C 2118 nt1.97□□□□□ -2.09
YJL107CP42947 UBR2YLR024C 5619 nt1.97□□□□□ -2.09
YJL107CP42947 ZRG8YER033C 3231 nt1.96□□□□□ -2.09
YJL107CP42947 SSS1YDR086C 243 nt1.96□□□□□ -2.1
YJL107CP42947 CYB5YNL111C 363 nt1.96□□□□□ -2.1
YJL107CP42947 RFX1YLR176C 2436 nt1.95□□□□□ -2.1
YJL107CP42947 snR72snR72 98 nt1.95□□□□□ -2.1
YJL107CP42947 RPL37BYDR500C 267 nt1.95□□□□□ -2.1
YJL107CP42947 YMR046W-AYMR046W-A 129 nt1.95□□□□□ -2.1
YJL107CP42947 YCL046WYCL046W 324 nt1.95□□□□□ -2.1
YJL107CP42947 PLC1YPL268W 2610 nt1.95□□□□□ -2.1
YJL107CP42947 SYH1YPL105C 2550 nt1.94□□□□□ -2.1
YJL107CP42947 HER1YOR227W 3741 nt1.94□□□□□ -2.1
YJL107CP42947 snR55snR55 98 nt1.94□□□□□ -2.1
YJL107CP42947 YDR406W-AYDR406W-A 246 nt1.94□□□□□ -2.1
YJL107CP42947 YOR225WYOR225W 330 nt1.94□□□□□ -2.1
YJL107CP42947 LYS14YDR034C 2373 nt1.93□□□□□ -2.1
YJL107CP42947 MDM20YOL076W 2391 nt1.93□□□□□ -2.1
Retrieved 100 of 7,029 protein–RNA pairs in 18.6 ms