Protein–RNA interactions for Protein: P40089

LSM5, U6 snRNA-associated Sm-like protein LSm5, yeastyeast

Known RBP Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
LSM5P40089 AIM9YER080W 1884 nt1.56□□□□□ -2.16
LSM5P40089 RFX1YLR176C 2436 nt1.56□□□□□ -2.16
LSM5P40089 SMC4YLR086W 4257 nt1.55□□□□□ -2.16
LSM5P40089 YJL015CYJL015C 285 nt1.55□□□□□ -2.16
LSM5P40089 YJL020W-AYJL020W-A 258 nt1.55□□□□□ -2.16
LSM5P40089 YJR157WYJR157W 363 nt1.55□□□□□ -2.16
LSM5P40089 YOR146WYOR146W 306 nt1.55□□□□□ -2.16
LSM5P40089 ALK1YGL021W 2283 nt1.55□□□□□ -2.16
LSM5P40089 PRM3YPL192C 402 nt1.54□□□□□ -2.16
LSM5P40089 YPL229WYPL229W 621 nt1.54□□□□□ -2.16
LSM5P40089 SGO1YOR073W 1773 nt1.54□□□□□ -2.16
LSM5P40089 RPS24BYIL069C 408 nt1.53□□□□□ -2.16
LSM5P40089 NOC3YLR002C 1992 nt1.53□□□□□ -2.16
LSM5P40089 TIM18YOR297C 579 nt1.53□□□□□ -2.16
LSM5P40089 ADR1YDR216W 3972 nt1.52□□□□□ -2.17
LSM5P40089 WIP1YDR374W-A 270 nt1.52□□□□□ -2.17
LSM5P40089 YGR042WYGR042W 816 nt1.52□□□□□ -2.17
LSM5P40089 YHL037CYHL037C 402 nt1.52□□□□□ -2.17
LSM5P40089 HIT1YJR055W 495 nt1.52□□□□□ -2.17
LSM5P40089 YKL202WYKL202W 582 nt1.52□□□□□ -2.17
LSM5P40089 PIG1YLR273C 1947 nt1.52□□□□□ -2.17
LSM5P40089 AZF1YOR113W 2745 nt1.51□□□□□ -2.17
LSM5P40089 VPS55YJR044C 423 nt1.51□□□□□ -2.17
LSM5P40089 YKL083WYKL083W 615 nt1.51□□□□□ -2.17
LSM5P40089 RPL40BYKR094C 387 nt1.51□□□□□ -2.17
LSM5P40089 UBC7YMR022W 498 nt1.51□□□□□ -2.17
LSM5P40089 YLL032CYLL032C 2478 nt1.51□□□□□ -2.17
LSM5P40089 PCF11YDR228C 1881 nt1.5□□□□□ -2.17
LSM5P40089 VPS54YDR027C 2670 nt1.5□□□□□ -2.17
LSM5P40089 SBE22YHR103W 2559 nt1.5□□□□□ -2.17
LSM5P40089 YGR174W-AYGR174W-A 87 nt1.5□□□□□ -2.17
LSM5P40089 MRPL31YKL138C 396 nt1.5□□□□□ -2.17
LSM5P40089 SDH2YLL041C 801 nt1.5□□□□□ -2.17
LSM5P40089 CDC31YOR257W 486 nt1.5□□□□□ -2.17
LSM5P40089 YPL185WYPL185W 396 nt1.5□□□□□ -2.17
LSM5P40089 YPR177CYPR177C 372 nt1.5□□□□□ -2.17
LSM5P40089 SSK2YNR031C 4740 nt1.5□□□□□ -2.17
LSM5P40089 EST2YLR318W 2655 nt1.5□□□□□ -2.17
LSM5P40089 CHS1YNL192W 3396 nt1.49□□□□□ -2.17
LSM5P40089 IRA1YBR140C 9279 nt1.49□□□□□ -2.17
LSM5P40089 CYC7YEL039C 342 nt1.49□□□□□ -2.17
LSM5P40089 AGA2YGL032C 264 nt1.49□□□□□ -2.17
LSM5P40089 YGL217CYGL217C 342 nt1.49□□□□□ -2.17
LSM5P40089 YIL102CYIL102C 306 nt1.49□□□□□ -2.17
LSM5P40089 SLX4YLR135W 2247 nt1.49□□□□□ -2.17
LSM5P40089 AI5_ALPHAQ0070 1893 nt1.49□□□□□ -2.17
LSM5P40089 MUK1YPL070W 1839 nt1.49□□□□□ -2.17
LSM5P40089 NUP192YJL039C 5052 nt1.49□□□□□ -2.17
LSM5P40089 YBP1YBR216C 2025 nt1.49□□□□□ -2.17
LSM5P40089 MEC1YBR136W 7107 nt1.48□□□□□ -2.17
LSM5P40089 YML003WYML003W 873 nt1.48□□□□□ -2.17
LSM5P40089 PIK1YNL267W 3201 nt1.48□□□□□ -2.17
LSM5P40089 AIM44YPL158C 2277 nt1.47□□□□□ -2.17
LSM5P40089 PFD1YJL179W 330 nt1.47□□□□□ -2.17
LSM5P40089 YLR222C-AYLR222C-A 231 nt1.47□□□□□ -2.17
LSM5P40089 HCH1YNL281W 462 nt1.47□□□□□ -2.17
LSM5P40089 RKM1YPL208W 1752 nt1.47□□□□□ -2.17
LSM5P40089 SAC3YDR159W 3906 nt1.47□□□□□ -2.17
LSM5P40089 KAP122YGL016W 3246 nt1.46□□□□□ -2.18
LSM5P40089 SEC21YNL287W 2808 nt1.46□□□□□ -2.18
LSM5P40089 CCH1YGR217W 6120 nt1.46□□□□□ -2.18
LSM5P40089 YMR001C-AYMR001C-A 231 nt1.46□□□□□ -2.18
LSM5P40089 YOR161W-BYOR161W-B 261 nt1.46□□□□□ -2.18
LSM5P40089 RPB10YOR210W 213 nt1.46□□□□□ -2.18
LSM5P40089 YLR419WYLR419W 4308 nt1.46□□□□□ -2.18
LSM5P40089 YAP6YDR259C 1152 nt1.45□□□□□ -2.18
LSM5P40089 YOL159CYOL159C 516 nt1.44□□□□□ -2.18
LSM5P40089 APL2YKL135C 2181 nt1.43□□□□□ -2.18
LSM5P40089 YDL211CYDL211C 1119 nt1.43□□□□□ -2.18
LSM5P40089 RPL26AYLR344W 384 nt1.43□□□□□ -2.18
LSM5P40089 YMR175W-AYMR175W-A 195 nt1.43□□□□□ -2.18
LSM5P40089 YOR108C-AYOR108C-A 210 nt1.43□□□□□ -2.18
LSM5P40089 NUT2YPR168W 474 nt1.43□□□□□ -2.18
LSM5P40089 CAT8YMR280C 4302 nt1.43□□□□□ -2.18
LSM5P40089 YLR422WYLR422W 5799 nt1.42□□□□□ -2.18
LSM5P40089 SCW11YGL028C 1629 nt1.42□□□□□ -2.18
LSM5P40089 SWF1YDR126W 1011 nt1.42□□□□□ -2.18
LSM5P40089 VAR1Q0140 1197 nt1.42□□□□□ -2.18
LSM5P40089 UPS1YLR193C 528 nt1.42□□□□□ -2.18
LSM5P40089 ISF1YMR081C 1017 nt1.42□□□□□ -2.18
LSM5P40089 YNL058CYNL058C 951 nt1.42□□□□□ -2.18
LSM5P40089 YSY6YBR162W-A 198 nt1.42□□□□□ -2.18
LSM5P40089 YBR285WYBR285W 435 nt1.42□□□□□ -2.18
LSM5P40089 ZIP2YGL249W 2115 nt1.42□□□□□ -2.18
LSM5P40089 PMD1YER132C 5262 nt1.41□□□□□ -2.18
LSM5P40089 YLR434CYLR434C 384 nt1.41□□□□□ -2.18
LSM5P40089 YOR053WYOR053W 342 nt1.41□□□□□ -2.18
LSM5P40089 MSN5YDR335W 3675 nt1.41□□□□□ -2.18
LSM5P40089 SEC3YER008C 4011 nt1.41□□□□□ -2.18
LSM5P40089 MPT5YGL178W 2580 nt1.4□□□□□ -2.19
LSM5P40089 YBR174CYBR174C 315 nt1.4□□□□□ -2.19
LSM5P40089 NUT1YGL151W 3399 nt1.39□□□□□ -2.19
LSM5P40089 YHL041WYHL041W 450 nt1.39□□□□□ -2.19
LSM5P40089 YMR242W-AYMR242W-A 90 nt1.39□□□□□ -2.19
LSM5P40089 SPT21YMR179W 2277 nt1.38□□□□□ -2.19
LSM5P40089 PIP2YOR363C 2991 nt1.38□□□□□ -2.19
LSM5P40089 SPC110YDR356W 2835 nt1.38□□□□□ -2.19
LSM5P40089 RSM22YKL155C 1887 nt1.38□□□□□ -2.19
LSM5P40089 NPC2YDL046W 522 nt1.38□□□□□ -2.19
LSM5P40089 YDR182W-AYDR182W-A 204 nt1.38□□□□□ -2.19
Retrieved 100 of 7,029 protein–RNA pairs in 73.4 ms