Protein–RNA interactions for Protein: P39962

YCK3, Casein kinase I homolog 3, yeastyeast

Predictions only

Length 524 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
YCK3P39962 MMS1YPR164W 4224 nt4.36□□□□□ -1.71
YCK3P39962 YDL114W-AYDL114W-A 114 nt4.36□□□□□ -1.71
YCK3P39962 UFD2YDL190C 2886 nt4.35□□□□□ -1.71
YCK3P39962 RIC1YLR039C 3171 nt4.35□□□□□ -1.71
YCK3P39962 MRD1YPR112C 2664 nt4.35□□□□□ -1.71
YCK3P39962 PHO91YNR013C 2685 nt4.35□□□□□ -1.71
YCK3P39962 SEC21YNL287W 2808 nt4.35□□□□□ -1.71
YCK3P39962 SSB2YNL209W 1842 nt4.35□□□□□ -1.71
YCK3P39962 SAK1YER129W 3429 nt4.34□□□□□ -1.71
YCK3P39962 YOR055WYOR055W 435 nt4.34□□□□□ -1.71
YCK3P39962 PIK1YNL267W 3201 nt4.34□□□□□ -1.72
YCK3P39962 YOR1YGR281W 4434 nt4.34□□□□□ -1.72
YCK3P39962 YDR186CYDR186C 2634 nt4.33□□□□□ -1.72
YCK3P39962 YDR246W-AYDR246W-A 201 nt4.32□□□□□ -1.72
YCK3P39962 ANS1YHR126C 480 nt4.32□□□□□ -1.72
YCK3P39962 PEP5YMR231W 3090 nt4.32□□□□□ -1.72
YCK3P39962 AZF1YOR113W 2745 nt4.31□□□□□ -1.72
YCK3P39962 TRS130YMR218C 3309 nt4.31□□□□□ -1.72
YCK3P39962 RAD54YGL163C 2697 nt4.3□□□□□ -1.72
YCK3P39962 DGR1YNL130C-A 147 nt4.3□□□□□ -1.72
YCK3P39962 YCG1YDR325W 3108 nt4.3□□□□□ -1.72
YCK3P39962 STU2YLR045C 2667 nt4.29□□□□□ -1.72
YCK3P39962 BOI1YBL085W 2943 nt4.29□□□□□ -1.72
YCK3P39962 DNF2YDR093W 4839 nt4.28□□□□□ -1.72
YCK3P39962 TPS3YMR261C 3165 nt4.28□□□□□ -1.72
YCK3P39962 AKL1YBR059C 3327 nt4.28□□□□□ -1.72
YCK3P39962 RPS21AYKR057W 264 nt4.27□□□□□ -1.73
YCK3P39962 PDR10YOR328W 4695 nt4.27□□□□□ -1.73
YCK3P39962 IRR1YIL026C 3453 nt4.27□□□□□ -1.73
YCK3P39962 YOL075CYOL075C 3885 nt4.26□□□□□ -1.73
YCK3P39962 RAD2YGR258C 3096 nt4.25□□□□□ -1.73
YCK3P39962 KAP123YER110C 3342 nt4.25□□□□□ -1.73
YCK3P39962 GAL4YPL248C 2646 nt4.25□□□□□ -1.73
YCK3P39962 RAD4YER162C 2265 nt4.24□□□□□ -1.73
YCK3P39962 ASK10YGR097W 3441 nt4.24□□□□□ -1.73
YCK3P39962 POM152YMR129W 4014 nt4.24□□□□□ -1.73
YCK3P39962 SEG2YKL105C 3399 nt4.23□□□□□ -1.73
YCK3P39962 NET1YJL076W 3570 nt4.22□□□□□ -1.73
YCK3P39962 YDR034C-DYDR034C-D 5313 nt4.22□□□□□ -1.73
YCK3P39962 CHS1YNL192W 3396 nt4.21□□□□□ -1.74
YCK3P39962 PAU8YAL068C 363 nt4.21□□□□□ -1.74
YCK3P39962 PAU20YOL161C 363 nt4.21□□□□□ -1.74
YCK3P39962 SWI1YPL016W 3945 nt4.21□□□□□ -1.74
YCK3P39962 APL4YPR029C 2499 nt4.21□□□□□ -1.74
YCK3P39962 RTT101YJL047C 2529 nt4.21□□□□□ -1.74
YCK3P39962 BPT1YLL015W 4680 nt4.2□□□□□ -1.74
YCK3P39962 TOM5YPR133W-A 153 nt4.2□□□□□ -1.74
YCK3P39962 NOG1YPL093W 1944 nt4.2□□□□□ -1.74
YCK3P39962 EPL1YFL024C 2499 nt4.2□□□□□ -1.74
YCK3P39962 SEC26YDR238C 2922 nt4.2□□□□□ -1.74
YCK3P39962 ZRG8YER033C 3231 nt4.19□□□□□ -1.74
YCK3P39962 YMR160WYMR160W 2451 nt4.19□□□□□ -1.74
YCK3P39962 YGR109W-BYGR109W-B 4644 nt4.19□□□□□ -1.74
YCK3P39962 RPS22AYJL190C 393 nt4.19□□□□□ -1.74
YCK3P39962 TIM12YBR091C 330 nt4.19□□□□□ -1.74
YCK3P39962 GPR1YDL035C 2886 nt4.19□□□□□ -1.74
YCK3P39962 RDS3YPR094W 324 nt4.18□□□□□ -1.74
YCK3P39962 BNI4YNL233W 2679 nt4.18□□□□□ -1.74
YCK3P39962 YPR097WYPR097W 3222 nt4.17□□□□□ -1.74
YCK3P39962 VPS3YDR495C 3036 nt4.17□□□□□ -1.74
YCK3P39962 SED4YCR067C 3198 nt4.17□□□□□ -1.74
YCK3P39962 ISW1YBR245C 3390 nt4.17□□□□□ -1.74
YCK3P39962 KSP1YHR082C 3090 nt4.17□□□□□ -1.74
YCK3P39962 BLM10YFL007W 6432 nt4.17□□□□□ -1.74
YCK3P39962 MNN4YKL201C 3537 nt4.16□□□□□ -1.74
YCK3P39962 tR(ACG)JtR(ACG)J 73 nt4.15□□□□□ -1.75
YCK3P39962 YJR039WYJR039W 3366 nt4.15□□□□□ -1.75
YCK3P39962 YDR261C-DYDR261C-D 4815 nt4.14□□□□□ -1.75
YCK3P39962 PDR15YDR406W 4590 nt4.14□□□□□ -1.75
YCK3P39962 DUG2YBR281C 2637 nt4.14□□□□□ -1.75
YCK3P39962 HMG1YML075C 3165 nt4.14□□□□□ -1.75
YCK3P39962 RIA1YNL163C 3333 nt4.13□□□□□ -1.75
YCK3P39962 GDE1YPL110C 3672 nt4.13□□□□□ -1.75
YCK3P39962 PAN1YIR006C 4443 nt4.13□□□□□ -1.75
YCK3P39962 YGR125WYGR125W 3111 nt4.13□□□□□ -1.75
YCK3P39962 ALA1YOR335C 2877 nt4.12□□□□□ -1.75
YCK3P39962 CPA2YJR109C 3357 nt4.11□□□□□ -1.75
YCK3P39962 TCB3YML072C 4638 nt4.1□□□□□ -1.75
YCK3P39962 PCA1YBR295W 3651 nt4.1□□□□□ -1.75
YCK3P39962 tX(XXX)DtX(XXX)D 100 nt4.1□□□□□ -1.75
YCK3P39962 UFD4YKL010C 4452 nt4.1□□□□□ -1.75
YCK3P39962 YDR210W-BYDR210W-B 5313 nt4.1□□□□□ -1.75
YCK3P39962 YDR261W-BYDR261W-B 5313 nt4.1□□□□□ -1.75
YCK3P39962 YFL002W-AYFL002W-A 5313 nt4.1□□□□□ -1.75
YCK3P39962 YGR161W-BYGR161W-B 5313 nt4.1□□□□□ -1.75
YCK3P39962 YLR410W-BYLR410W-B 5313 nt4.1□□□□□ -1.75
YCK3P39962 YCL019WYCL019W 5313 nt4.1□□□□□ -1.75
YCK3P39962 SET1YHR119W 3243 nt4.09□□□□□ -1.75
YCK3P39962 RPS28BYLR264W 204 nt4.09□□□□□ -1.75
YCK3P39962 JEN1YKL217W 1851 nt4.09□□□□□ -1.76
YCK3P39962 MIS1YBR084W 2928 nt4.08□□□□□ -1.76
YCK3P39962 SEY1YOR165W 2331 nt4.07□□□□□ -1.76
YCK3P39962 RPL26BYGR034W 384 nt4.07□□□□□ -1.76
YCK3P39962 NOP14YDL148C 2433 nt4.06□□□□□ -1.76
YCK3P39962 RAD9YDR217C 3930 nt4.06□□□□□ -1.76
YCK3P39962 NOP10YHR072W-A 177 nt4.06□□□□□ -1.76
YCK3P39962 PDR1YGL013C 3207 nt4.05□□□□□ -1.76
YCK3P39962 ATG26YLR189C 3597 nt4.05□□□□□ -1.76
YCK3P39962 YAL042C-AYAL042C-A 378 nt4.05□□□□□ -1.76
YCK3P39962 MIM2YLR099W-A 264 nt4.05□□□□□ -1.76
Retrieved 100 of 7,029 protein–RNA pairs in 49.5 ms