Protein–RNA interactions for Protein: P25594

VBA3, Vacuolar basic amino acid transporter 3, yeastyeast

Predictions only

Length 458 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VBA3P25594 SIR4YDR227W 4077 nt2.43□□□□□ -2.02
VBA3P25594 COG8YML071C 1824 nt2.42□□□□□ -2.02
VBA3P25594 ABF2YMR072W 552 nt2.42□□□□□ -2.02
VBA3P25594 SIR3YLR442C 2937 nt2.42□□□□□ -2.02
VBA3P25594 INP2YMR163C 2118 nt2.42□□□□□ -2.02
VBA3P25594 CDC60YPL160W 3273 nt2.41□□□□□ -2.02
VBA3P25594 TIM9YEL020W-A 264 nt2.41□□□□□ -2.02
VBA3P25594 VTC1YER072W 390 nt2.41□□□□□ -2.02
VBA3P25594 YGL007C-AYGL007C-A 87 nt2.41□□□□□ -2.02
VBA3P25594 HCS1YKL017C 2052 nt2.4□□□□□ -2.02
VBA3P25594 PSD2YGR170W 3417 nt2.4□□□□□ -2.03
VBA3P25594 SVL3YPL032C 2478 nt2.4□□□□□ -2.03
VBA3P25594 BRP1YGL007W 378 nt2.4□□□□□ -2.03
VBA3P25594 YBR064WYBR064W 429 nt2.4□□□□□ -2.03
VBA3P25594 YDR406W-AYDR406W-A 246 nt2.39□□□□□ -2.03
VBA3P25594 PAU18YLL064C 363 nt2.39□□□□□ -2.03
VBA3P25594 PAU6YNR076W 363 nt2.39□□□□□ -2.03
VBA3P25594 YDR341CYDR341C 1824 nt2.39□□□□□ -2.03
VBA3P25594 LYS14YDR034C 2373 nt2.39□□□□□ -2.03
VBA3P25594 YGR250CYGR250C 2346 nt2.39□□□□□ -2.03
VBA3P25594 TDA9YML081W 3756 nt2.38□□□□□ -2.03
VBA3P25594 MDM20YOL076W 2391 nt2.38□□□□□ -2.03
VBA3P25594 TOR1YJR066W 7413 nt2.38□□□□□ -2.03
VBA3P25594 RTT101YJL047C 2529 nt2.38□□□□□ -2.03
VBA3P25594 NUP170YBL079W 4509 nt2.38□□□□□ -2.03
VBA3P25594 MRP10YDL045W-A 288 nt2.38□□□□□ -2.03
VBA3P25594 YMR141W-AYMR141W-A 225 nt2.38□□□□□ -2.03
VBA3P25594 YOL155W-AYOL155W-A 135 nt2.38□□□□□ -2.03
VBA3P25594 PHO2YDL106C 1680 nt2.37□□□□□ -2.03
VBA3P25594 YHR073W-AYHR073W-A 177 nt2.37□□□□□ -2.03
VBA3P25594 SYH1YPL105C 2550 nt2.37□□□□□ -2.03
VBA3P25594 PLC1YPL268W 2610 nt2.37□□□□□ -2.03
VBA3P25594 IST2YBR086C 2841 nt2.36□□□□□ -2.03
VBA3P25594 VPS13YLL040C 9435 nt2.36□□□□□ -2.03
VBA3P25594 SAP190YKR028W 3102 nt2.36□□□□□ -2.03
VBA3P25594 ZRG17YNR039C 1818 nt2.36□□□□□ -2.03
VBA3P25594 APQ12YIL040W 417 nt2.36□□□□□ -2.03
VBA3P25594 MVP1YMR004W 1536 nt2.36□□□□□ -2.03
VBA3P25594 YCK3YER123W 1575 nt2.36□□□□□ -2.03
VBA3P25594 YEF3YLR249W 3135 nt2.35□□□□□ -2.03
VBA3P25594 NAM7YMR080C 2916 nt2.35□□□□□ -2.03
VBA3P25594 PET309YLR067C 2898 nt2.35□□□□□ -2.03
VBA3P25594 YER088C-AYER088C-A 324 nt2.35□□□□□ -2.03
VBA3P25594 YKR075W-AYKR075W-A 270 nt2.35□□□□□ -2.03
VBA3P25594 RPB10YOR210W 213 nt2.35□□□□□ -2.03
VBA3P25594 RAV1YJR033C 4074 nt2.35□□□□□ -2.03
VBA3P25594 snR60snR60 104 nt2.34□□□□□ -2.03
VBA3P25594 YNL198CYNL198C 303 nt2.34□□□□□ -2.03
VBA3P25594 YCL046WYCL046W 324 nt2.34□□□□□ -2.03
VBA3P25594 SCW11YGL028C 1629 nt2.34□□□□□ -2.04
VBA3P25594 GIP3YPL137C 3831 nt2.34□□□□□ -2.04
VBA3P25594 UBP1YDL122W 2430 nt2.33□□□□□ -2.04
VBA3P25594 YBL005W-BYBL005W-B 5268 nt2.33□□□□□ -2.04
VBA3P25594 LCD1YDR499W 2244 nt2.33□□□□□ -2.04
VBA3P25594 DCP2YNL118C 2913 nt2.33□□□□□ -2.04
VBA3P25594 RPL37BYDR500C 267 nt2.33□□□□□ -2.04
VBA3P25594 YHR071C-AYHR071C-A 321 nt2.33□□□□□ -2.04
VBA3P25594 ATP7YKL016C 525 nt2.33□□□□□ -2.04
VBA3P25594 YMR172C-AYMR172C-A 384 nt2.33□□□□□ -2.04
VBA3P25594 MAK10YEL053C 2202 nt2.32□□□□□ -2.04
VBA3P25594 PAM16YJL104W 450 nt2.32□□□□□ -2.04
VBA3P25594 TFC3YAL001C 3483 nt2.32□□□□□ -2.04
VBA3P25594 MLH1YMR167W 2310 nt2.31□□□□□ -2.04
VBA3P25594 NPR2YEL062W 1848 nt2.31□□□□□ -2.04
VBA3P25594 ZIP1YDR285W 2628 nt2.31□□□□□ -2.04
VBA3P25594 YLR294CYLR294C 330 nt2.31□□□□□ -2.04
VBA3P25594 YMR307C-AYMR307C-A 195 nt2.31□□□□□ -2.04
VBA3P25594 IES4YOR189W 351 nt2.31□□□□□ -2.04
VBA3P25594 YCL023CYCL023C 348 nt2.31□□□□□ -2.04
VBA3P25594 YDR003W-AYDR003W-A 123 nt2.3□□□□□ -2.04
VBA3P25594 UTP22YGR090W 3714 nt2.3□□□□□ -2.04
VBA3P25594 NOP14YDL148C 2433 nt2.29□□□□□ -2.04
VBA3P25594 snR55snR55 98 nt2.29□□□□□ -2.04
VBA3P25594 YCR087C-AYCR087C-A 462 nt2.29□□□□□ -2.04
VBA3P25594 KTI11YBL071W-A 249 nt2.29□□□□□ -2.04
VBA3P25594 CTR9YOL145C 3234 nt2.28□□□□□ -2.04
VBA3P25594 YMR194C-AYMR194C-A 225 nt2.28□□□□□ -2.04
VBA3P25594 YNL028WYNL028W 318 nt2.28□□□□□ -2.04
VBA3P25594 SPF1YEL031W 3648 nt2.28□□□□□ -2.05
VBA3P25594 NIP100YPL174C 2607 nt2.27□□□□□ -2.05
VBA3P25594 ATG11YPR049C 3537 nt2.27□□□□□ -2.05
VBA3P25594 snR72snR72 98 nt2.27□□□□□ -2.05
VBA3P25594 GPG1YGL121C 381 nt2.27□□□□□ -2.05
VBA3P25594 CAT2YML042W 2013 nt2.26□□□□□ -2.05
VBA3P25594 SSS1YDR086C 243 nt2.26□□□□□ -2.05
VBA3P25594 YGL052WYGL052W 306 nt2.26□□□□□ -2.05
VBA3P25594 YJL135WYJL135W 318 nt2.26□□□□□ -2.05
VBA3P25594 YJL197C-AYJL197C-A 282 nt2.26□□□□□ -2.05
VBA3P25594 CSE2YNR010W 450 nt2.26□□□□□ -2.05
VBA3P25594 YOL160WYOL160W 342 nt2.26□□□□□ -2.05
VBA3P25594 YOR015WYOR015W 360 nt2.26□□□□□ -2.05
VBA3P25594 MSH5YDL154W 2706 nt2.26□□□□□ -2.05
VBA3P25594 DNF1YER166W 4716 nt2.26□□□□□ -2.05
VBA3P25594 SAS3YBL052C 2496 nt2.26□□□□□ -2.05
VBA3P25594 PUT3YKL015W 2940 nt2.25□□□□□ -2.05
VBA3P25594 SPT21YMR179W 2277 nt2.25□□□□□ -2.05
VBA3P25594 YJL052C-AYJL052C-A 120 nt2.25□□□□□ -2.05
VBA3P25594 YLR120W-AYLR120W-A 102 nt2.25□□□□□ -2.05
VBA3P25594 YOR302WYOR302W 78 nt2.25□□□□□ -2.05
VBA3P25594 SAP185YJL098W 3177 nt2.24□□□□□ -2.05
Retrieved 100 of 7,029 protein–RNA pairs in 30.9 ms