Protein–RNA interactions for Protein: P20448

HCA4, ATP-dependent RNA helicase HCA4, yeastyeast

Known RBP Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
HCA4P20448 RBK1YCR036W 1002 nt2.55□□□□□ -2
HCA4P20448 PHO2YDL106C 1680 nt2.55□□□□□ -2
HCA4P20448 INA22YIR024C 651 nt2.55□□□□□ -2
HCA4P20448 NUP100YKL068W 2880 nt2.55□□□□□ -2
HCA4P20448 RPL38YLR325C 237 nt2.55□□□□□ -2
HCA4P20448 YNL097C-BYNL097C-B 123 nt2.55□□□□□ -2
HCA4P20448 INO80YGL150C 4470 nt2.55□□□□□ -2
HCA4P20448 CRM1YGR218W 3255 nt2.55□□□□□ -2
HCA4P20448 RIC1YLR039C 3171 nt2.54□□□□□ -2
HCA4P20448 KRE33YNL132W 3171 nt2.54□□□□□ -2
HCA4P20448 YEL014CYEL014C 306 nt2.54□□□□□ -2
HCA4P20448 VTC1YER072W 390 nt2.54□□□□□ -2
HCA4P20448 OLI1Q0130 231 nt2.54□□□□□ -2
HCA4P20448 YGR164WYGR164W 336 nt2.54□□□□□ -2
HCA4P20448 YNL028WYNL028W 318 nt2.54□□□□□ -2
HCA4P20448 YBL083CYBL083C 426 nt2.54□□□□□ -2
HCA4P20448 CSE2YNR010W 450 nt2.54□□□□□ -2
HCA4P20448 SWA2YDR320C 2007 nt2.54□□□□□ -2
HCA4P20448 MRP10YDL045W-A 288 nt2.53□□□□□ -2
HCA4P20448 SSS1YDR086C 243 nt2.53□□□□□ -2
HCA4P20448 SNC1YAL030W 354 nt2.53□□□□□ -2
HCA4P20448 YLR255CYLR255C 354 nt2.53□□□□□ -2
HCA4P20448 MET18YIL128W 3099 nt2.53□□□□□ -2
HCA4P20448 IRA2YOL081W 9240 nt2.52□□□□□ -2.01
HCA4P20448 CDC27YBL084C 2277 nt2.52□□□□□ -2.01
HCA4P20448 PRE4YFR050C 801 nt2.52□□□□□ -2.01
HCA4P20448 RPS27AYKL156W 249 nt2.52□□□□□ -2.01
HCA4P20448 ATG11YPR049C 3537 nt2.51□□□□□ -2.01
HCA4P20448 YDR426CYDR426C 378 nt2.51□□□□□ -2.01
HCA4P20448 COF1YLL050C 432 nt2.51□□□□□ -2.01
HCA4P20448 NUT2YPR168W 474 nt2.51□□□□□ -2.01
HCA4P20448 YLR149CYLR149C 2193 nt2.51□□□□□ -2.01
HCA4P20448 VPS8YAL002W 3825 nt2.51□□□□□ -2.01
HCA4P20448 YOL098CYOL098C 3114 nt2.51□□□□□ -2.01
HCA4P20448 YGL217CYGL217C 342 nt2.5□□□□□ -2.01
HCA4P20448 YBR224WYBR224W 516 nt2.5□□□□□ -2.01
HCA4P20448 VMA9YCL005W-A 222 nt2.5□□□□□ -2.01
HCA4P20448 DOT6YER088C 2013 nt2.5□□□□□ -2.01
HCA4P20448 GUP1YGL084C 1683 nt2.5□□□□□ -2.01
HCA4P20448 IRR1YIL026C 3453 nt2.49□□□□□ -2.01
HCA4P20448 LCD1YDR499W 2244 nt2.49□□□□□ -2.01
HCA4P20448 STB4YMR019W 2850 nt2.49□□□□□ -2.01
HCA4P20448 YLR154W-AYLR154W-A 186 nt2.49□□□□□ -2.01
HCA4P20448 YML007C-AYML007C-A 111 nt2.49□□□□□ -2.01
HCA4P20448 PAN3YKL025C 2040 nt2.49□□□□□ -2.01
HCA4P20448 SAP190YKR028W 3102 nt2.48□□□□□ -2.01
HCA4P20448 snR74snR74 88 nt2.48□□□□□ -2.01
HCA4P20448 ATP7YKL016C 525 nt2.48□□□□□ -2.01
HCA4P20448 RRT15YLR162W-A 189 nt2.48□□□□□ -2.01
HCA4P20448 TOF2YKR010C 2316 nt2.48□□□□□ -2.01
HCA4P20448 MGM1YOR211C 2646 nt2.48□□□□□ -2.01
HCA4P20448 SIR4YDR227W 4077 nt2.47□□□□□ -2.01
HCA4P20448 SEC16YPL085W 6588 nt2.47□□□□□ -2.01
HCA4P20448 YDR286CYDR286C 345 nt2.47□□□□□ -2.01
HCA4P20448 PDE2YOR360C 1581 nt2.47□□□□□ -2.01
HCA4P20448 SCH9YHR205W 2475 nt2.46□□□□□ -2.02
HCA4P20448 ALK2YBL009W 2031 nt2.46□□□□□ -2.02
HCA4P20448 PAU8YAL068C 363 nt2.46□□□□□ -2.02
HCA4P20448 PAU20YOL161C 363 nt2.46□□□□□ -2.02
HCA4P20448 YOR376WYOR376W 369 nt2.46□□□□□ -2.02
HCA4P20448 YBR131C-AYBR131C-A 90 nt2.46□□□□□ -2.02
HCA4P20448 snR46snR46 197 nt2.46□□□□□ -2.02
HCA4P20448 UTP22YGR090W 3714 nt2.45□□□□□ -2.02
HCA4P20448 SAP185YJL098W 3177 nt2.45□□□□□ -2.02
HCA4P20448 SSD1YDR293C 3753 nt2.45□□□□□ -2.02
HCA4P20448 YJL052C-AYJL052C-A 120 nt2.45□□□□□ -2.02
HCA4P20448 YOR333CYOR333C 417 nt2.45□□□□□ -2.02
HCA4P20448 PEP3YLR148W 2757 nt2.45□□□□□ -2.02
HCA4P20448 DFG16YOR030W 1860 nt2.45□□□□□ -2.02
HCA4P20448 YPR097WYPR097W 3222 nt2.45□□□□□ -2.02
HCA4P20448 SMY1YKL079W 1971 nt2.45□□□□□ -2.02
HCA4P20448 VPS54YDR027C 2670 nt2.44□□□□□ -2.02
HCA4P20448 TRX1YLR043C 312 nt2.44□□□□□ -2.02
HCA4P20448 RPS17AYML024W 411 nt2.44□□□□□ -2.02
HCA4P20448 YPR002C-AYPR002C-A 198 nt2.44□□□□□ -2.02
HCA4P20448 YPR092WYPR092W 306 nt2.44□□□□□ -2.02
HCA4P20448 NOP53YPL146C 1368 nt2.44□□□□□ -2.02
HCA4P20448 SEF1YBL066C 3447 nt2.44□□□□□ -2.02
HCA4P20448 NUP170YBL079W 4509 nt2.43□□□□□ -2.02
HCA4P20448 YBR184WYBR184W 1572 nt2.43□□□□□ -2.02
HCA4P20448 SSQ1YLR369W 1974 nt2.43□□□□□ -2.02
HCA4P20448 MPT5YGL178W 2580 nt2.43□□□□□ -2.02
HCA4P20448 YIR030W-AYIR030W-A 384 nt2.42□□□□□ -2.02
HCA4P20448 YBR178WYBR178W 375 nt2.42□□□□□ -2.02
HCA4P20448 YBR182C-AYBR182C-A 195 nt2.42□□□□□ -2.02
HCA4P20448 ZRG8YER033C 3231 nt2.42□□□□□ -2.02
HCA4P20448 PUT3YKL015W 2940 nt2.41□□□□□ -2.02
HCA4P20448 LRE1YCL051W 1752 nt2.41□□□□□ -2.02
HCA4P20448 TOF1YNL273W 3717 nt2.41□□□□□ -2.02
HCA4P20448 GRR1YJR090C 3456 nt2.41□□□□□ -2.02
HCA4P20448 MUK1YPL070W 1839 nt2.41□□□□□ -2.02
HCA4P20448 PLC1YPL268W 2610 nt2.41□□□□□ -2.02
HCA4P20448 CUL3YGR003W 2235 nt2.41□□□□□ -2.02
HCA4P20448 SET2YJL168C 2202 nt2.41□□□□□ -2.02
HCA4P20448 SEC5YDR166C 2916 nt2.4□□□□□ -2.02
HCA4P20448 MNE1YOR350C 1992 nt2.4□□□□□ -2.02
HCA4P20448 BRP1YGL007W 378 nt2.4□□□□□ -2.03
HCA4P20448 YBL053WYBL053W 375 nt2.4□□□□□ -2.03
HCA4P20448 RTT107YHR154W 3213 nt2.4□□□□□ -2.03
HCA4P20448 PEX8YGR077C 1770 nt2.4□□□□□ -2.03
Retrieved 100 of 7,029 protein–RNA pairs in 37.9 ms